Conservation of cofitness between ECD_00741 and ECD_02841 in Escherichia coli BL21

70 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_00741 7,8-diaminopelargonic acid synthase, PLP-dependent 1.0 ECD_02841 bifunctional prepilin leader peptidase/ methylase 0.52 19
Escherichia coli ECOR27 0.99 NOLOHH_22775 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase 0.93 NOLOHH_10960 pppA prepilin peptidase PppA low > 57
Escherichia coli ECRC101 0.99 OKFHMN_06405 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase 0.29 OKFHMN_00235 pulO prepilin peptidase — —
Escherichia coli ECRC101 0.99 MCAODC_25620 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase 0.29 MCAODC_15315 pulO prepilin peptidase — —
Escherichia coli ECRC62 0.99 BNILDI_21045 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase 0.93 BNILDI_00555 pppA prepilin peptidase PppA — —
Escherichia coli ECRC102 0.99 NIAGMN_04450 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase 0.29 NIAGMN_28555 pulO prepilin peptidase — —
Escherichia coli BW25113 0.99 b0774 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase (NCBI) 0.93 b2972 b2972 putative peptidase (VIMSS) low > 76
Escherichia coli ECRC98 0.99 JDDGAC_10040 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase 0.29 JDDGAC_30345 pulO prepilin peptidase — —
Escherichia coli ECOR38 0.99 HEPCGN_01635 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase 0.99 HEPCGN_18035 pppA prepilin peptidase PppA low > 85
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_02939 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.92 OHPLBJKB_00736 Leader peptidase PppA low > 73
Escherichia fergusonii Becca 0.99 EFB2_03331 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.99 EFB2_00842 Prepilin peptidase PppA low > 86
Escherichia coli Nissle 1917 0.99 ECOLIN_RS04125 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.94 ECOLIN_RS17100 prepilin peptidase PppA low > 52
Klebsiella michiganensis M5al 0.87 BWI76_RS08755 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.28 BWI76_RS05035 prepilin peptidase — —
Enterobacter sp. TBS_079 0.86 MPMX20_01402 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.27 MPMX20_01525 Type 4 prepilin-like proteins leader peptide-processing enzyme low > 85
Enterobacter asburiae PDN3 0.85 EX28DRAFT_2217 adenosylmethionine-8-amino-7-oxononanoate transaminase 0.22 EX28DRAFT_2069 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases low > 76
Dickeya dadantii 3937 0.76 DDA3937_RS08505 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.33 DDA3937_RS14750 prepilin peptidase low > 74
Dickeya dianthicola 67-19 0.75 HGI48_RS08670 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.33 HGI48_RS14685 prepilin peptidase low > 71
Dickeya dianthicola ME23 0.75 DZA65_RS08960 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.33 DZA65_RS15630 prepilin peptidase low > 75
Pectobacterium carotovorum WPP14 0.74 HER17_RS13465 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.33 HER17_RS06740 A24 family peptidase low > 75
Erwinia tracheiphila SCR3 0.74 LU632_RS09125 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase 0.28 LU632_RS25275 A24 family peptidase — —
Rahnella sp. WP5 0.73 EX31_RS23690 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.30 EX31_RS16215 prepilin peptidase low > 89
Pantoea sp. MT58 0.73 IAI47_13535 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.19 IAI47_02105 prepilin peptidase low > 76
Vibrio cholerae E7946 ATCC 55056 0.67 CSW01_05640 adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA 0.40 CSW01_12285 prepilin peptidase — —
Alteromonas macleodii MIT1002 0.63 MIT1002_01378 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.28 MIT1002_03011 Pectic enzymes secretion protein OutO — —
Acinetobacter radioresistens SK82 0.57 MPMX26_02454 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.29 MPMX26_00244 Type 4 prepilin-like proteins leader peptide-processing enzyme low > 36
Shewanella loihica PV-4 0.56 Shew_1718 adenosylmethionine-8-amino-7-oxononanoate aminotransferase (RefSeq) 0.24 Shew_3440 prepilin peptidase (RefSeq) — —
Shewanella sp. ANA-3 0.56 Shewana3_2520 aminotransferase (RefSeq) 0.26 Shewana3_0417 type 4 prepilin peptidase 1. Aspartic peptidase. MEROPS family A24A (RefSeq) — —
Shewanella oneidensis MR-1 0.56 SO2741 bioA adenosylmethionine--8-amino-7-oxononanoate aminotransferase (NCBI ptt file) 0.27 SO0414 pilD type 4 prepilin-like proteins leader peptide processing enzyme (NCBI ptt file) — —
Shewanella amazonensis SB2B 0.51 Sama_1437 adenosylmethionine-8-amino-7-oxononanoate aminotransferase (RefSeq) 0.22 Sama_0367 prepilin peptidase (RefSeq) — —
Dyella japonica UNC79MFTsu3.2 0.38 ABZR86_RS10225 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.24 ABZR86_RS10050 A24 family peptidase low > 74
Rhodanobacter denitrificans MT42 0.37 LRK55_RS03920 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.21 LRK55_RS03730 A24 family peptidase low > 63
Rhodanobacter denitrificans FW104-10B01 0.36 LRK54_RS04150 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.21 LRK54_RS03960 A24 family peptidase low > 59
Rhodanobacter sp. FW510-T8 0.35 OKGIIK_11015 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase 0.22 OKGIIK_10830 pulO prepilin peptidase low > 52
Desulfovibrio vulgaris Miyazaki F 0.35 DvMF_1002 adenosylmethionine-8-amino-7-oxononanoate aminotransferase (RefSeq) 0.16 DvMF_1037 peptidase A24A domain protein (RefSeq) low > 51
Pseudomonas sp. S08-1 0.35 OH686_10850 adenosylmethionine-8-amino-7-oxononanoate transaminase 0.30 OH686_16495 Leader peptidase (Prepilin peptidase) / N-methyltransferase low > 80
Pseudomonas syringae pv. syringae B728a 0.34 Psyr_0454 adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme 0.30 Psyr_0796 type 4 prepilin peptidase 1, Aspartic peptidase, MEROPS family A24A low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.34 Psyr_0454 adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme 0.30 Psyr_0796 type 4 prepilin peptidase 1, Aspartic peptidase, MEROPS family A24A low > 86
Pseudomonas fluorescens FW300-N2E3 0.34 AO353_08045 adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.29 AO353_14320 methyltransferase low > 101
Pseudomonas fluorescens FW300-N2C3 0.34 AO356_13570 adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.29 AO356_16005 methyltransferase low > 104
Pseudomonas fluorescens FW300-N1B4 0.34 Pf1N1B4_2377 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) 0.28 Pf1N1B4_2840 Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-) low > 87
Kangiella aquimarina DSM 16071 0.34 B158DRAFT_0179 adenosylmethionine-8-amino-7-oxononanoate transaminase 0.30 B158DRAFT_2140 type 4 prepilin peptidase 1 (EC:3.4.23.43). Aspartic peptidase. MEROPS family A24A — —
Pseudomonas putida KT2440 0.34 PP_4984 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.32 PP_0632 leader peptidase/N-methyltransferase low > 96
Pseudomonas fluorescens FW300-N2E2 0.34 Pf6N2E2_4631 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) 0.28 Pf6N2E2_5140 Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-) low > 103
Pseudomonas fluorescens GW456-L13 0.34 PfGW456L13_1044 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) 0.30 PfGW456L13_1508 Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-) low > 87
Pseudomonas stutzeri RCH2 0.34 Psest_0306 adenosylmethionine-8-amino-7-oxononanoate transaminase 0.28 Psest_3286 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases low > 67
Pseudomonas sp. RS175 0.34 PFR28_04208 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.25 PFR28_03733 Type 4 prepilin-like proteins leader peptide-processing enzyme low > 88
Pseudomonas fluorescens SBW25-INTG 0.34 PFLU_RS28195 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.31 PFLU_RS03940 prepilin peptidase low > 109
Pseudomonas fluorescens SBW25 0.34 PFLU_RS28195 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.31 PFLU_RS03940 prepilin peptidase low > 109
Pseudomonas simiae WCS417 0.33 PS417_26540 adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.31 PS417_03895 methyltransferase low > 88
Marinobacter adhaerens HP15 0.33 HP15_2925 adenosylmethionine-8-amino-7-oxononanoate transaminase 0.27 HP15_2411 type IV pilus prepilin peptidase PilD low > 73
Xanthomonas campestris pv. campestris strain 8004 0.33 Xcc-8004.1559.1 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) 0.24 Xcc-8004.1345.1 Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-) — —
Lysobacter sp. OAE881 0.32 ABIE51_RS05265 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.28 ABIE51_RS04805 A24 family peptidase low > 62
Variovorax sp. SCN45 0.32 GFF145 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) 0.25 GFF2508 Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-) low > 127
Synechococcus elongatus PCC 7942 0.32 Synpcc7942_0031 bioA aminotransferase 0.24 Synpcc7942_1935 pilD type 4 prepilin peptidase 1. Aspartic peptidase. MEROPS family A24A — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.31 GFF3993 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) 0.29 GFF1281 Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-) low > 90
Desulfovibrio vulgaris Hildenborough JW710 0.30 DVU2559 bioA adenosylmethionine--8-amino-7-oxononanoate aminotransferase (TIGR) 0.21 DVU1263 pppA type IV prepilin-like proteins leader peptidase (TIGR) low > 55
Paraburkholderia graminis OAS925 0.30 ABIE53_000580 adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.29 ABIE53_003596 leader peptidase (prepilin peptidase)/N-methyltransferase low > 113
Burkholderia phytofirmans PsJN 0.30 BPHYT_RS02165 adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.30 BPHYT_RS17155 peptidase A24 low > 109
Sphingomonas koreensis DSMZ 15582 0.30 Ga0059261_3674 adenosylmethionine-8-amino-7-oxononanoate transaminase 0.14 Ga0059261_1485 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases low > 68
Ralstonia sp. UNC404CL21Col 0.30 ABZR87_RS12335 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.27 ABZR87_RS01855 A24 family peptidase low > 80
Paraburkholderia bryophila 376MFSha3.1 0.30 H281DRAFT_02094 adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.30 H281DRAFT_06255 leader peptidase (prepilin peptidase) / N-methyltransferase low > 103
Ralstonia solanacearum PSI07 0.30 RPSI07_RS16705 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.24 RPSI07_RS11050 prepilin peptidase low > 81
Acidovorax sp. GW101-3H11 0.29 Ac3H11_3828 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) 0.31 Ac3H11_4764 Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-) — —
Ralstonia solanacearum UW163 0.29 UW163_RS14150 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.27 UW163_RS07435 prepilin peptidase — —
Ralstonia solanacearum IBSBF1503 0.29 RALBFv3_RS00815 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.27 RALBFv3_RS06190 prepilin peptidase low > 76
Variovorax sp. OAS795 0.29 ABID97_RS16265 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.24 ABID97_RS23440 A24 family peptidase low > 91
Ralstonia solanacearum GMI1000 0.29 RS_RS07430 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.24 RS_RS14140 prepilin peptidase low > 80
Dechlorosoma suillum PS 0.29 Dsui_2880 adenosylmethionine-8-amino-7-oxononanoate transaminase 0.29 Dsui_1318 prepilin signal peptidase PulO-like peptidase low > 51
Paraburkholderia sabiae LMG 24235 0.28 QEN71_RS01100 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.34 QEN71_RS27315 A24 family peptidase — —
Herbaspirillum seropedicae SmR1 0.28 HSERO_RS12250 adenosylmethionine--8-amino-7-oxononanoate aminotransferase 0.28 HSERO_RS01760 methyltransferase low > 78
Cupriavidus basilensis FW507-4G11 0.27 RR42_RS00925 adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA 0.25 RR42_RS17990 methyltransferase low > 128

Not shown: 26 genomes with orthologs for ECD_00741 only; 1 genomes with orthologs for ECD_02841 only