Conservation of cofitness between ECD_00936 and ECD_00354 in Escherichia coli BL21

77 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_00936 aminopeptidase N 1.0 ECD_00354 tRNA-guanine transglycosylase 0.55 7
Escherichia coli BW25113 1.00 b0932 pepN aminopeptidase N (NCBI) 1.00 b0406 tgt queuine tRNA-ribosyltransferase (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_02734 Aminopeptidase N 1.00 OHPLBJKB_03270 Queuine tRNA-ribosyltransferase low > 73
Escherichia coli ECOR27 1.00 NOLOHH_21920 pepN aminopeptidase N 1.00 NOLOHH_01440 tgt tRNA guanosine(34) transglycosylase Tgt low > 75
Escherichia coli ECRC62 1.00 BNILDI_20175 pepN aminopeptidase N 1.00 BNILDI_22855 tgt tRNA guanosine(34) transglycosylase Tgt low > 75
Escherichia coli ECRC102 0.99 NIAGMN_03085 pepN aminopeptidase N 1.00 NIAGMN_06560 tgt tRNA guanosine(34) transglycosylase Tgt — —
Escherichia coli ECRC100 0.99 OKFHMN_05365 pepN aminopeptidase N 1.00 OKFHMN_08505 tgt tRNA guanosine(34) transglycosylase Tgt low > 80
Escherichia coli ECRC101 0.99 MCAODC_24755 pepN aminopeptidase N 1.00 MCAODC_27730 tgt tRNA guanosine(34) transglycosylase Tgt low > 87
Escherichia coli ECRC98 0.99 JDDGAC_08975 pepN aminopeptidase N 1.00 JDDGAC_12160 tgt tRNA guanosine(34) transglycosylase Tgt low > 86
Escherichia coli ECRC99 0.99 KEDOAH_22370 pepN aminopeptidase N 1.00 KEDOAH_19460 tgt tRNA guanosine(34) transglycosylase Tgt — —
Escherichia fergusonii Becca 0.99 EFB2_03132 Aminopeptidase N 1.00 EFB2_03651 Queuine tRNA-ribosyltransferase low > 86
Escherichia coli Nissle 1917 0.99 ECOLIN_RS04935 aminopeptidase N 1.00 ECOLIN_RS02445 tRNA guanosine(34) transglycosylase Tgt — —
Escherichia coli ECOR38 0.99 HEPCGN_23160 pepN aminopeptidase N 1.00 HEPCGN_07145 tgt tRNA guanosine(34) transglycosylase Tgt low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.94 GFF3235 Membrane alanine aminopeptidase N (EC 3.4.11.2) 0.98 GFF4305 tRNA-guanine transglycosylase (EC 2.4.2.29) low > 78
Enterobacter asburiae PDN3 0.91 EX28DRAFT_2004 aminopeptidase N, Escherichia coli type 0.98 EX28DRAFT_2565 tRNA-guanine transglycosylase low > 76
Enterobacter sp. TBS_079 0.89 MPMX20_01590 Aminopeptidase N 0.98 MPMX20_00997 Queuine tRNA-ribosyltransferase low > 85
Klebsiella michiganensis M5al 0.88 BWI76_RS09890 aminopeptidase N 0.98 BWI76_RS06300 tRNA guanosine(34) transglycosylase Tgt — —
Rahnella sp. WP5 0.80 EX31_RS18125 aminopeptidase N 0.91 EX31_RS22095 tRNA guanosine(34) transglycosylase Tgt low > 89
Pantoea sp. MT58 0.80 IAI47_12745 aminopeptidase N 0.95 IAI47_14805 tRNA guanosine(34) transglycosylase Tgt low > 76
Serratia liquefaciens MT49 0.79 IAI46_08775 aminopeptidase N 0.91 IAI46_04840 tRNA guanosine(34) transglycosylase Tgt low > 86
Pectobacterium carotovorum WPP14 0.79 HER17_RS12010 aminopeptidase N 0.92 HER17_RS15990 tRNA guanosine(34) transglycosylase Tgt low > 75
Dickeya dadantii 3937 0.76 DDA3937_RS12885 aminopeptidase N 0.92 DDA3937_RS05470 tRNA guanosine(34) transglycosylase Tgt low > 74
Dickeya dianthicola 67-19 0.76 HGI48_RS12955 aminopeptidase N 0.92 HGI48_RS05530 tRNA guanosine(34) transglycosylase Tgt low > 71
Dickeya dianthicola ME23 0.76 DZA65_RS13420 aminopeptidase N 0.92 DZA65_RS05855 tRNA guanosine(34) transglycosylase Tgt low > 75
Erwinia tracheiphila SCR3 0.74 LU632_RS09930 pepN aminopeptidase N 0.91 LU632_RS18500 tgt tRNA guanosine(34) transglycosylase Tgt low > 74
Vibrio cholerae E7946 ATCC 55056 0.64 CSW01_07505 aminopeptidase N 0.85 CSW01_03850 tRNA guanosine(34) transglycosylase Tgt low > 62
Shewanella sp. ANA-3 0.55 Shewana3_1779 pepN aminopeptidase N (RefSeq) 0.85 Shewana3_1435 tgt queuine tRNA-ribosyltransferase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.54 SO2600 pepN aminopeptidase N (NCBI ptt file) 0.85 SO3113 tgt queuine tRNA-ribosyltransferase (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.54 Shew_1803 aminopeptidase N (RefSeq) 0.84 Shew_2337 tgt queuine tRNA-ribosyltransferase (RefSeq) low > 60
Shewanella amazonensis SB2B 0.52 Sama_1586 pepN aminopeptidase N (RefSeq) 0.85 Sama_2193 tgt queuine tRNA-ribosyltransferase (RefSeq) low > 62
Pseudomonas fluorescens SBW25 0.49 PFLU_RS13095 aminopeptidase N 0.71 PFLU_RS24900 tRNA guanosine(34) transglycosylase Tgt low > 109
Pseudomonas fluorescens SBW25-INTG 0.49 PFLU_RS13095 aminopeptidase N 0.71 PFLU_RS24900 tRNA guanosine(34) transglycosylase Tgt low > 109
Pseudomonas putida KT2440 0.48 PP_2017 aminopeptidase N 0.72 PP_0833 queuine tRNA-ribosyltransferase low > 96
Pseudomonas fluorescens FW300-N2C3 0.48 AO356_24560 aminopeptidase 0.72 AO356_06690 queuine tRNA-ribosyltransferase 0.28 60
Pseudomonas fluorescens FW300-N2E3 0.48 AO353_23630 aminopeptidase 0.72 AO353_15790 queuine tRNA-ribosyltransferase — —
Pseudomonas fluorescens FW300-N2E2 0.48 Pf6N2E2_604 Membrane alanine aminopeptidase N (EC 3.4.11.2) 0.72 Pf6N2E2_3198 tRNA-guanine transglycosylase (EC 2.4.2.29) low > 103
Pseudomonas simiae WCS417 0.48 PS417_12395 aminopeptidase N 0.71 PS417_23245 queuine tRNA-ribosyltransferase — —
Pseudomonas sp. RS175 0.48 PFR28_01574 Aminopeptidase N 0.72 PFR28_00277 Queuine tRNA-ribosyltransferase low > 88
Pseudomonas stutzeri RCH2 0.48 Psest_1922 aminopeptidase N, Escherichia coli type 0.72 Psest_1242 tRNA-guanine transglycosylase, queuosine-34-forming low > 67
Pseudomonas sp. S08-1 0.48 OH686_04270 aminopeptidase N 0.74 OH686_17430 tRNA-guanine transglycosylase low > 80
Herbaspirillum seropedicae SmR1 0.48 HSERO_RS17720 aminopeptidase N 0.64 HSERO_RS06175 queuine tRNA-ribosyltransferase low > 78
Pseudomonas fluorescens GW456-L13 0.48 PfGW456L13_3325 Membrane alanine aminopeptidase N (EC 3.4.11.2) 0.72 PfGW456L13_4882 tRNA-guanine transglycosylase (EC 2.4.2.29) low > 87
Azospirillum brasilense Sp245 0.48 AZOBR_RS14865 aminopeptidase N 0.52 AZOBR_RS06295 queuine tRNA-ribosyltransferase 0.27 95
Azospirillum sp. SherDot2 0.47 MPMX19_04335 Aminopeptidase N 0.52 MPMX19_01697 Queuine tRNA-ribosyltransferase low > 112
Pseudomonas syringae pv. syringae B728a 0.47 Psyr_1690 Peptidase M1, membrane alanine aminopeptidase 0.72 Psyr_1228 tRNA-guanine transglycosylase — —
Kangiella aquimarina DSM 16071 0.47 B158DRAFT_1479 aminopeptidase N, Escherichia coli type 0.72 B158DRAFT_2516 tRNA-guanine transglycosylase (EC 2.4.2.29) low > 40
Pseudomonas syringae pv. syringae B728a ΔmexB 0.47 Psyr_1690 Peptidase M1, membrane alanine aminopeptidase 0.72 Psyr_1228 tRNA-guanine transglycosylase — —
Marinobacter adhaerens HP15 0.47 HP15_1065 aminopeptidase N 0.72 HP15_1479 queuine tRNA-ribosyltransferase low > 73
Pseudomonas fluorescens FW300-N1B4 0.47 Pf1N1B4_4614 Membrane alanine aminopeptidase N (EC 3.4.11.2) 0.72 Pf1N1B4_3006 tRNA-guanine transglycosylase (EC 2.4.2.29) low > 87
Alteromonas macleodii MIT1002 0.46 MIT1002_02028 Aminopeptidase N 0.76 MIT1002_02813 Queuine tRNA-ribosyltransferase low > 70
Cupriavidus basilensis FW507-4G11 0.45 RR42_RS05200 aminopeptidase N 0.65 RR42_RS17400 queuine tRNA-ribosyltransferase low > 128
Ralstonia solanacearum GMI1000 0.44 RS_RS10660 aminopeptidase N 0.62 RS_RS13575 tRNA guanosine(34) transglycosylase Tgt low > 80
Ralstonia solanacearum PSI07 0.44 RPSI07_RS14040 aminopeptidase N 0.61 RPSI07_RS11615 tRNA guanosine(34) transglycosylase Tgt low > 81
Ralstonia solanacearum IBSBF1503 0.44 RALBFv3_RS03270 aminopeptidase N 0.62 RALBFv3_RS05685 tRNA guanosine(34) transglycosylase Tgt low > 76
Ralstonia solanacearum UW163 0.44 UW163_RS10455 aminopeptidase N 0.62 UW163_RS07940 tRNA guanosine(34) transglycosylase Tgt — —
Dechlorosoma suillum PS 0.44 Dsui_2287 aminopeptidase N 0.68 Dsui_3323 tRNA-guanine transglycosylase, queuosine-34-forming low > 51
Burkholderia phytofirmans PsJN 0.43 BPHYT_RS15210 aminopeptidase N 0.62 BPHYT_RS03410 queuine tRNA-ribosyltransferase low > 109
Paraburkholderia bryophila 376MFSha3.1 0.43 H281DRAFT_03988 alanyl aminopeptidase. Metallo peptidase. MEROPS family M01 0.63 H281DRAFT_04670 tRNA-guanine transglycosylase low > 103
Ralstonia sp. UNC404CL21Col 0.43 ABZR87_RS15120 aminopeptidase N 0.62 ABZR87_RS01280 tRNA guanosine(34) transglycosylase Tgt low > 80
Paraburkholderia sabiae LMG 24235 0.42 QEN71_RS03785 aminopeptidase N 0.63 QEN71_RS26640 tRNA guanosine(34) transglycosylase Tgt low > 153
Variovorax sp. OAS795 0.42 ABID97_RS21770 aminopeptidase N 0.57 ABID97_RS01595 tRNA guanosine(34) transglycosylase Tgt low > 91
Sinorhizobium meliloti 1021 0.41 SMc02370 aminopeptidase N 0.50 SMc01206 queuine tRNA-ribosyltransferase low > 103
Variovorax sp. SCN45 0.41 GFF3118 Membrane alanine aminopeptidase N (EC 3.4.11.2) 0.57 GFF5534 Queuine tRNA-ribosyltransferase (EC 2.4.2.29) low > 127
Acidovorax sp. GW101-3H11 0.41 Ac3H11_2633 Membrane alanine aminopeptidase N (EC 3.4.11.2) 0.57 Ac3H11_861 tRNA-guanine transglycosylase (EC 2.4.2.29) low > 79
Agrobacterium fabrum C58 0.41 Atu0984 aminopeptidase N 0.48 Atu1677 queuine tRNA-ribosyltransferase low > 89
Hydrogenophaga sp. GW460-11-11-14-LB1 0.41 GFF275 Membrane alanine aminopeptidase N (EC 3.4.11.2) 0.59 GFF2798 tRNA-guanine transglycosylase (EC 2.4.2.29) low > 90
Sphingomonas koreensis DSMZ 15582 0.41 Ga0059261_2024 aminopeptidase N, Escherichia coli type 0.52 Ga0059261_1017 tRNA-guanine transglycosylase low > 68
Rhizobium sp. OAE497 0.41 ABIE40_RS05720 aminopeptidase N 0.49 ABIE40_RS09435 tRNA guanosine(34) transglycosylase Tgt low > 107
Caulobacter crescentus NA1000 0.40 CCNA_02566 membrane alanine aminopeptidase 0.51 CCNA_01659 queuine tRNA-ribosyltransferase low > 66
Caulobacter crescentus NA1000 Δfur 0.40 CCNA_02566 membrane alanine aminopeptidase 0.51 CCNA_01659 queuine tRNA-ribosyltransferase low > 67
Castellaniella sp019104865 MT123 0.39 ABCV34_RS02570 aminopeptidase N 0.65 ABCV34_RS15365 tRNA guanosine(34) transglycosylase Tgt low > 48
Rhodanobacter sp. FW510-T8 0.38 OKGIIK_13715 Aminopeptidase N 0.65 OKGIIK_10000 tgt tRNA guanosine(34) transglycosylase Tgt low > 52
Rhodanobacter denitrificans FW104-10B01 0.38 LRK54_RS10200 aminopeptidase N 0.66 LRK54_RS03130 tRNA guanosine(34) transglycosylase Tgt low > 59
Rhodanobacter denitrificans MT42 0.38 LRK55_RS09840 aminopeptidase N 0.66 LRK55_RS02880 tRNA guanosine(34) transglycosylase Tgt low > 63
Dinoroseobacter shibae DFL-12 0.38 Dshi_1223 aminopeptidase N (RefSeq) 0.50 Dshi_2346 queuine tRNA-ribosyltransferase (RefSeq) low > 64
Phaeobacter inhibens DSM 17395 0.38 PGA1_c09880 aminopeptidase N 0.51 PGA1_c20570 queuine tRNA-ribosyltransferase Tgt 0.25 18
Dyella japonica UNC79MFTsu3.2 0.37 ABZR86_RS15770 aminopeptidase N 0.66 ABZR86_RS09540 tRNA guanosine(34) transglycosylase Tgt low > 74
Acinetobacter radioresistens SK82 0.35 MPMX26_01760 Aminopeptidase N 0.69 MPMX26_00438 Queuine tRNA-ribosyltransferase low > 36

Not shown: 1 genomes with orthologs for ECD_00936 only; 22 genomes with orthologs for ECD_00354 only