Conservation of cofitness between CSW01_05660 and CSW01_10585 in Vibrio cholerae E7946 ATCC 55056

81 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_05660 dethiobiotin synthase 1.0 CSW01_10585 flagellar type III secretion system protein FliR 0.74 6
Escherichia coli ECRC102 0.47 NIAGMN_00330 bioD dethiobiotin synthase 0.25 NIAGMN_02400 fliR flagellar type III secretion system protein FliR low > 80
Escherichia coli ECRC101 0.47 MCAODC_17665 bioD dethiobiotin synthase 0.25 MCAODC_19740 fliR flagellar type III secretion system protein FliR — —
Escherichia coli BW25113 0.47 b1593 b1593 orf, hypothetical protein (VIMSS) 0.25 b1950 fliR flagellar biosynthesis protein R (NCBI) low > 76
Escherichia coli ECRC62 0.47 BNILDI_17040 bioD dethiobiotin synthase 0.25 BNILDI_15075 fliR flagellar type III secretion system protein FliR low > 75
Escherichia coli ECRC98 0.47 JDDGAC_02335 bioD dethiobiotin synthase 0.25 JDDGAC_00240 fliR flagellar type III secretion system protein FliR low > 87
Escherichia coli ECRC100 0.47 OKFHMN_27745 bioD dethiobiotin synthase 0.25 OKFHMN_25655 fliR flagellar type III secretion system protein FliR — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.47 OHPLBJKB_02133 ATP-dependent dethiobiotin synthetase BioD 1 0.25 OHPLBJKB_01779 hypothetical protein — —
Escherichia coli ECRC99 0.47 KEDOAH_00360 bioD dethiobiotin synthase 0.25 KEDOAH_02440 fliR flagellar type III secretion system protein FliR — —
Escherichia fergusonii Becca 0.47 EFB2_02399 ATP-dependent dethiobiotin synthetase BioD 1 0.24 EFB2_01996 Flagellar biosynthetic protein FliR low > 86
Escherichia coli ECOR27 0.47 NOLOHH_18250 bioD dethiobiotin synthase 0.25 NOLOHH_16285 fliR flagellar type III secretion system protein FliR — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.47 GFF1784 Dethiobiotin synthetase (EC 6.3.3.3) 0.26 GFF4006 Flagellar biosynthesis protein FliR low > 78
Pectobacterium carotovorum WPP14 0.47 HER17_RS10730 dethiobiotin synthase 0.25 HER17_RS08220 flagellar type III secretion system protein FliR low > 75
Pantoea agglomerans CFBP13505 P0401 0.46 PagCFBP13505_RS06400 ATP-dependent dethiobiotin synthetase BioD 0.24 PagCFBP13505_RS01880 flagellar type III secretion system protein FliR low > 74
Dickeya dianthicola 67-19 0.46 HGI48_RS08690 ATP-dependent dethiobiotin synthetase BioD 0.22 HGI48_RS13470 flagellar type III secretion system protein FliR low > 71
Enterobacter sp. TBS_079 0.46 MPMX20_02064 ATP-dependent dethiobiotin synthetase BioD 1 0.28 MPMX20_02947 Flagellar biosynthetic protein FliR low > 85
Dickeya dianthicola ME23 0.46 DZA65_RS08980 ATP-dependent dethiobiotin synthetase BioD 0.22 DZA65_RS13955 flagellar type III secretion system protein FliR low > 75
Dickeya dadantii 3937 0.45 DDA3937_RS10680 ATP-dependent dethiobiotin synthetase BioD 0.23 DDA3937_RS13425 flagellar type III secretion system protein FliR low > 74
Enterobacter asburiae PDN3 0.45 EX28DRAFT_1492 dethiobiotin synthase 0.28 EX28DRAFT_0604 flagellar biosynthetic protein FliR low > 76
Serratia liquefaciens MT49 0.45 IAI46_06540 ATP-dependent dethiobiotin synthetase BioD 0.20 IAI46_15900 flagellar type III secretion system protein FliR low > 87
Pantoea sp. MT58 0.45 IAI47_09755 ATP-dependent dethiobiotin synthetase BioD 0.24 IAI47_07970 flagellar type III secretion system protein FliR low > 76
Erwinia tracheiphila HP pepo 2.2 0.43 IJEDHG_23285 bioD dethiobiotin synthase 0.23 IJEDHG_21175 fliR flagellar type III secretion system protein FliR low > 61
Erwinia tracheiphila SCR3 0.43 LU632_RS12300 bioD dethiobiotin synthase 0.23 LU632_RS10515 fliR flagellar type III secretion system protein FliR low > 73
Erwinia amylovora T8 0.43 OLJFJH_14270 dethiobiotin synthase 0.23 OLJFJH_15415 flagellar type III secretion system protein FliR low > 58
Rahnella sp. WP5 0.42 EX31_RS23710 ATP-dependent dethiobiotin synthetase BioD 0.26 EX31_RS09600 flagellar type III secretion system protein FliR low > 89
Pseudomonas putida KT2440 0.42 PP_0366 dethiobiotin synthetase 0.34 PP_4353 Flagellar biosynthetic protein fliR low > 96
Pseudomonas sp. BP01 0.41 JOY50_RS17950 bioD dethiobiotin synthase 0.36 JOY50_RS00610 fliR flagellar biosynthetic protein FliR low > 84
Pseudomonas segetis P6 0.40 MPMX49_00763 ATP-dependent dethiobiotin synthetase BioD 1 0.38 MPMX49_03132 Flagellar biosynthetic protein FliR low > 75
Pseudomonas sp. SVBP6 0.40 COO64_RS22705 bioD dethiobiotin synthase 0.38 COO64_RS21205 fliR flagellar biosynthetic protein FliR low > 93
Pseudomonas sp. DMC3 0.39 GFF72 ATP-dependent dethiobiotin synthetase BioD 1 0.35 GFF2465 Flagellar biosynthetic protein FliR low > 89
Pseudomonas fluorescens GW456-L13 0.38 PfGW456L13_1151 Dethiobiotin synthetase (EC 6.3.3.3) 0.36 PfGW456L13_4337 Flagellar biosynthesis protein FliR low > 87
Shewanella oneidensis MR-1 0.38 SO2737 bioD dethiobiotin synthase (NCBI ptt file) 0.52 SO3216 fliR flagellar biosynthetic protein FliR (NCBI ptt file) — —
Shewanella sp. ANA-3 0.38 Shewana3_2516 bioD dithiobiotin synthetase (RefSeq) 0.51 Shewana3_1354 fliR flagellar biosynthesis protein FliR (RefSeq) — —
Pseudomonas fluorescens SBW25-INTG 0.38 PFLU_RS27630 dethiobiotin synthase 0.35 PFLU_RS21700 flagellar type III secretion system protein FliR low > 109
Pseudomonas fluorescens SBW25 0.38 PFLU_RS27630 dethiobiotin synthase 0.35 PFLU_RS21700 flagellar type III secretion system protein FliR low > 109
Pseudomonas simiae WCS417 0.38 PS417_25985 dethiobiotin synthetase 0.35 PS417_19730 flagellar biosynthesis protein FliR low > 88
Dyella japonica UNC79MFTsu3.2 0.37 ABZR86_RS12700 dethiobiotin synthase 0.26 ABZR86_RS20240 flagellar biosynthetic protein FliR low > 74
Marinobacter adhaerens HP15 0.37 HP15_2482 dethiobiotin synthetase 0.39 HP15_2310 flagellar biosynthesis protein FliR low > 73
Pseudomonas fluorescens FW300-N1B4 0.37 Pf1N1B4_2491 Dethiobiotin synthetase (EC 6.3.3.3) 0.35 Pf1N1B4_3620 Flagellar biosynthesis protein FliR low > 87
Pseudomonas fluorescens FW300-N2C3 0.37 AO356_14155 dethiobiotin synthetase 0.35 AO356_03760 flagellar biosynthetic protein FliR low > 104
Pseudomonas orientalis W4I3 0.37 QF045_RS00395 dethiobiotin synthase 0.34 QF045_RS21860 flagellar biosynthetic protein FliR low > 93
Pseudomonas sp. RS175 0.37 PFR28_04099 ATP-dependent dethiobiotin synthetase BioD 1 0.36 PFR28_00847 Flagellar biosynthetic protein FliR — —
Pseudomonas lactucae CFBP13502 0.36 GEMAOFIL_05318 ATP-dependent dethiobiotin synthetase BioD 1 0.35 GEMAOFIL_04144 Flagellar biosynthetic protein FliR low > 96
Pseudomonas fluorescens FW300-N2E2 0.36 Pf6N2E2_4764 Dethiobiotin synthetase (EC 6.3.3.3) 0.36 Pf6N2E2_2578 Flagellar biosynthesis protein FliR low > 103
Pseudomonas fluorescens FW300-N2E3 0.36 AO353_07505 dethiobiotin synthetase 0.35 AO353_18755 flagellar biosynthetic protein FliR low > 101
Dechlorosoma suillum PS 0.36 Dsui_2884 dethiobiotin synthase 0.26 Dsui_1744 flagellar biosynthetic protein FliR low > 51
Shewanella loihica PV-4 0.36 Shew_1722 dethiobiotin synthase (RefSeq) 0.49 Shew_1378 fliR flagellar biosynthesis protein FliR (RefSeq) — —
Rhodanobacter sp. FW510-T8 0.36 OKGIIK_16455 bioD dethiobiotin synthase 0.19 OKGIIK_02805 fliR flagellar biosynthetic protein FliR low > 53
Pseudomonas syringae pv. syringae B728a 0.35 Psyr_4683 dethiobiotin synthase 0.38 Psyr_3442 Flagellar biosynthesis protein FliR low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.35 Psyr_4683 dethiobiotin synthase 0.38 Psyr_3442 Flagellar biosynthesis protein FliR low > 86
Hydrogenophaga sp. GW460-11-11-14-LB1 0.35 GFF3994 Dethiobiotin synthetase (EC 6.3.3.3) 0.22 GFF4089 Flagellar biosynthesis protein FliR — —
Shewanella amazonensis SB2B 0.35 Sama_1441 bioD dithiobiotin synthetase (RefSeq) 0.48 Sama_2285 fliR flagellar biosynthesis protein FliR (RefSeq) — —
Acidovorax sp. GW101-3H11 0.35 Ac3H11_3829 Dethiobiotin synthetase (EC 6.3.3.3) 0.20 Ac3H11_1416 Flagellar biosynthesis protein FliR low > 79
Pseudomonas sp. S08-1 0.34 OH686_10335 dethiobiotin synthase 0.35 OH686_02760 flagellar biosynthetic protein FliR low > 80
Pseudomonas stutzeri RCH2 0.34 Psest_0415 dethiobiotin synthase 0.36 Psest_1734 flagellar biosynthetic protein FliR low > 67
Variovorax sp. SCN45 0.34 GFF143 Dethiobiotin synthase BioD (EC 6.3.3.3) 0.25 GFF5738 Flagellar biosynthesis protein FliR low > 127
Herbaspirillum seropedicae SmR1 0.33 HSERO_RS12255 dethiobiotin synthetase 0.23 HSERO_RS10250 flagellar biosynthesis protein FliR low > 78
Burkholderia phytofirmans PsJN 0.33 BPHYT_RS02155 dithiobiotin synthetase 0.27 BPHYT_RS18835 flagellar biosynthesis protein FliR low > 109
Rhodanobacter denitrificans FW104-10B01 0.33 LRK54_RS07180 dethiobiotin synthase 0.18 LRK54_RS13555 flagellar biosynthetic protein FliR low > 59
Lysobacter sp. OAE881 0.33 ABIE51_RS17990 dethiobiotin synthase 0.20 ABIE51_RS16840 flagellar biosynthetic protein FliR low > 62
Alteromonas macleodii MIT1002 0.32 MIT1002_01382 ATP-dependent dethiobiotin synthetase BioD 1 0.44 MIT1002_01097 Flagellar biosynthetic protein FliR low > 70
Rhodanobacter denitrificans MT42 0.32 LRK55_RS06915 dethiobiotin synthase 0.18 LRK55_RS13295 flagellar biosynthetic protein FliR low > 63
Rhodanobacter sp000427505 FW510-R12 0.32 LRK53_RS01195 dethiobiotin synthase 0.21 LRK53_RS15020 flagellar biosynthetic protein FliR — —
Pseudomonas aeruginosa PA14 0.30 IKLFDK_22915 dethiobiotin synthase 0.35 IKLFDK_06885 flagellar biosynthetic protein FliR low > 98
Ralstonia sp. UNC404CL21Col 0.30 ABZR87_RS12345 dethiobiotin synthase 0.24 ABZR87_RS22220 flagellar biosynthetic protein FliR low > 80
Pseudomonas aeruginosa PUPa3 0.30 DQ20_RS36805 bioD;go_function=dethiobiotin dethiobiotin synthase 0.35 DQ20_RS47120 fliR;go_component=membrane|0016020||IEA;go_process=protein flagellar biosynthetic protein FliR — —
Paraburkholderia bryophila 376MFSha3.1 0.30 H281DRAFT_02096 dethiobiotin synthetase 0.25 H281DRAFT_05774 flagellar biosynthetic protein FliR low > 103
Pseudomonas aeruginosa MRSN321 0.30 DY961_RS22525 bioD;go_function=dethiobiotin dethiobiotin synthase 0.35 DY961_RS05670 fliR;go_component=membrane|0016020||IEA;go_process=protein flagellar biosynthetic protein FliR — —
Paraburkholderia graminis OAS925 0.29 ABIE53_000578 dethiobiotin synthetase 0.26 ABIE53_000086 flagellar biosynthetic protein FliR low > 113
Ralstonia solanacearum UW163 0.29 UW163_RS14160 dethiobiotin synthase 0.23 UW163_RS17510 flagellar biosynthetic protein FliR — —
Ralstonia solanacearum IBSBF1503 0.29 RALBFv3_RS00825 dethiobiotin synthase 0.23 RALBFv3_RS21675 flagellar biosynthetic protein FliR — —
Ralstonia solanacearum PSI07 0.28 RPSI07_RS16695 dethiobiotin synthase 0.23 RPSI07_RS01450 flagellar biosynthetic protein FliR low > 81
Methylophilus sp. DMC18 0.28 GFF1686 ATP-dependent dethiobiotin synthetase BioD 1 0.24 GFF552 Flagellar biosynthetic protein FliR — —
Cupriavidus basilensis FW507-4G11 0.28 RR42_RS00935 dethiobiotin synthetase 0.20 RR42_RS23350 flagellar biosynthesis protein FliR — —
Ralstonia solanacearum GMI1000 0.27 RS_RS07440 ATP-dependent dethiobiotin synthetase BioD 0.23 RS_RS18950 flagellar biosynthetic protein FliR — —
Paraburkholderia sabiae LMG 24235 0.27 QEN71_RS01090 dethiobiotin synthase 0.25 QEN71_RS28855 flagellar biosynthetic protein FliR — —
Xanthomonas campestris pv. campestris strain 8004 0.24 Xcc-8004.4530.1 Dethiobiotin synthetase (EC 6.3.3.3) 0.21 Xcc-8004.2823.1 Flagellar biosynthesis protein FliR low > 74
Sphingobium sp. HT1-2 0.17 GFF3209 Dethiobiotin synthase BioD (EC 6.3.3.3) 0.21 GFF3740 Flagellar biosynthesis protein FliR low > 95
Magnetospirillum magneticum AMB-1 0.16 AMB_RS13890 ATP-dependent dethiobiotin synthetase BioD 0.14 AMB_RS03185 flagellar type III secretion system protein FliR — —
Castellaniella sp019104865 MT123 0.15 ABCV34_RS15285 dethiobiotin synthase 0.28 ABCV34_RS05705 flagellar biosynthetic protein FliR — —
Sphingomonas koreensis DSMZ 15582 0.15 Ga0059261_3673 dethiobiotin synthase 0.19 Ga0059261_2060 flagellar biosynthetic protein FliR low > 68
Rhodopseudomonas palustris CGA009 0.14 TX73_015410 dethiobiotin synthase 0.12 TX73_020140 flagellar biosynthetic protein FliR low > 86

Not shown: 14 genomes with orthologs for CSW01_05660 only; 11 genomes with orthologs for CSW01_10585 only