| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_01010 | | oligopeptidase A | 1.0 | CSW01_10335 | | RNA polymerase sigma factor FliA | 0.70 | 1 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.72 | GFF517 | | Oligopeptidase A (EC 3.4.24.70) | 0.40 | GFF1690 | | RNA polymerase sigma factor for flagellar operon | low | > 78 |
| Enterobacter asburiae PDN3 | 0.72 | EX28DRAFT_4063 | | Zn-dependent oligopeptidases | 0.40 | EX28DRAFT_0625 | | RNA polymerase sigma factor, FliA/WhiG family | low | > 76 |
| Escherichia coli ECRC62 | 0.72 | BNILDI_03210 | prlC | oligopeptidase A | 0.40 | BNILDI_15190 | fliA | RNA polymerase sigma factor FliA | low | > 75 |
| Escherichia coli ECOR27 | 0.72 | NOLOHH_08350 | prlC | oligopeptidase A | 0.40 | NOLOHH_16400 | fliA | RNA polymerase sigma factor FliA | low | > 76 |
| Pantoea sp. MT58 | 0.72 | IAI47_01345 | | oligopeptidase A | 0.39 | IAI47_08160 | | RNA polymerase sigma factor FliA | low | > 76 |
| Escherichia fergusonii Becca | 0.72 | EFB2_00317 | | Oligopeptidase A | 0.40 | EFB2_02023 | | RNA polymerase sigma factor FliA | low | > 86 |
| Pantoea agglomerans CFBP13505 P0401 | 0.72 | PagCFBP13505_RS17845 | | oligopeptidase A | 0.39 | PagCFBP13505_RS02055 | | RNA polymerase sigma factor FliA | low | > 74 |
| Escherichia coli BW25113 | 0.72 | b3498 | prlC | oligopeptidase A (NCBI) | 0.39 | b1922 | fliA | flagellar biosynthesis; alternative sigma factor 28; regulation of flagellar operons (VIMSS) | low | > 76 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.72 | OHPLBJKB_00205 | | Oligopeptidase A | 0.39 | OHPLBJKB_01807 | | RNA polymerase sigma factor FliA | low | > 74 |
| Escherichia coli ECOR38 | 0.72 | HEPCGN_15325 | prlC | oligopeptidase A | 0.40 | HEPCGN_04135 | fliA | RNA polymerase sigma factor FliA | low | > 88 |
| Escherichia coli Nissle 1917 | 0.72 | ECOLIN_RS19985 | | oligopeptidase A | 0.39 | ECOLIN_RS10975 | | RNA polymerase sigma factor FliA | low | > 55 |
| Enterobacter sp. TBS_079 | 0.72 | MPMX20_04397 | | Oligopeptidase A | 0.40 | MPMX20_02847 | | RNA polymerase sigma factor FliA | low | > 85 |
| Escherichia coli ECRC98 | 0.72 | JDDGAC_20045 | prlC | oligopeptidase A | 0.40 | JDDGAC_00370 | fliA | RNA polymerase sigma factor FliA | low | > 87 |
| Escherichia coli ECRC100 | 0.72 | OKFHMN_16415 | prlC | oligopeptidase A | 0.40 | OKFHMN_25780 | fliA | RNA polymerase sigma factor FliA | 0.66 | 21 |
| Escherichia coli ECRC99 | 0.72 | KEDOAH_11730 | prlC | oligopeptidase A | 0.40 | KEDOAH_02310 | fliA | RNA polymerase sigma factor FliA | — | — |
| Escherichia coli ECRC102 | 0.72 | NIAGMN_14180 | prlC | oligopeptidase A | 0.40 | NIAGMN_02270 | fliA | RNA polymerase sigma factor FliA | low | > 80 |
| Escherichia coli ECRC101 | 0.72 | MCAODC_06930 | prlC | oligopeptidase A | 0.40 | MCAODC_19610 | fliA | RNA polymerase sigma factor FliA | low | > 88 |
| Dickeya dadantii 3937 | 0.72 | DDA3937_RS21265 | | oligopeptidase A | 0.41 | DDA3937_RS13300 | | RNA polymerase sigma factor FliA | low | > 74 |
| Serratia liquefaciens MT49 | 0.71 | IAI46_24210 | | oligopeptidase A | 0.41 | IAI46_15785 | | RNA polymerase sigma factor FliA | low | > 86 |
| Erwinia tracheiphila SCR3 | 0.71 | LU632_RS19470 | prlC | oligopeptidase A | 0.40 | LU632_RS13785 | | RNA polymerase sigma factor FliA | low | > 74 |
| Erwinia tracheiphila HP pepo 2.2 | 0.71 | IJEDHG_12590 | prlC | oligopeptidase A | 0.40 | IJEDHG_21960 | fliA | RNA polymerase sigma factor FliA | low | > 61 |
| Dickeya dianthicola ME23 | 0.71 | DZA65_RS00035 | | oligopeptidase A | 0.41 | DZA65_RS13835 | | RNA polymerase sigma factor FliA | low | > 75 |
| Erwinia amylovora T8 | 0.71 | OLJFJH_04530 | | Oligopeptidase A | 0.39 | OLJFJH_12555 | | RNA polymerase sigma factor FliA | low | > 58 |
| Pectobacterium carotovorum WPP14 | 0.71 | HER17_RS21300 | | oligopeptidase A | 0.40 | HER17_RS08355 | | RNA polymerase sigma factor FliA | low | > 75 |
| Rahnella sp. WP5 | 0.70 | EX31_RS05165 | | oligopeptidase A | 0.41 | EX31_RS09450 | | RNA polymerase sigma factor FliA | low | > 89 |
| Dickeya dianthicola 67-19 | 0.70 | HGI48_RS00045 | | oligopeptidase A | 0.41 | HGI48_RS13350 | | RNA polymerase sigma factor FliA | low | > 71 |
| Shewanella loihica PV-4 | 0.68 | Shew_3657 | | oligopeptidase A (RefSeq) | 0.58 | Shew_1383 | fliA | flagellar biosynthesis sigma factor (RefSeq) | low | > 60 |
| Shewanella amazonensis SB2B | 0.67 | Sama_3546 | | oligopeptidase A (RefSeq) | 0.57 | Sama_2280 | fliA | flagellar biosynthesis sigma factor (RefSeq) | low | > 62 |
| Shewanella sp. ANA-3 | 0.67 | Shewana3_4051 | | oligopeptidase A (RefSeq) | 0.59 | Shewana3_1359 | fliA | flagellar biosynthesis sigma factor (RefSeq) | low | > 73 |
| Shewanella oneidensis MR-1 | 0.67 | SO4699 | prlC | oligopeptidase A (NCBI ptt file) | 0.59 | SO3210 | fliA | RNA polymerase sigma-27 factor (NCBI ptt file) | low | > 76 |
| Alteromonas macleodii MIT1002 | 0.66 | MIT1002_03633 | | Oligopeptidase A | 0.59 | MIT1002_01103 | | Sigma-F factor | low | > 70 |
| Pseudomonas aeruginosa PA14 | 0.58 | IKLFDK_25215 | | oligopeptidase A | 0.54 | IKLFDK_06920 | | flagellar biosynthesis sigma factor FliA | low | > 100 |
| Marinobacter adhaerens HP15 | 0.58 | HP15_3759 | | oligopeptidase A-like protein | 0.52 | HP15_2302 | | flagellar biosynthesis sigma factor FliA | 0.43 | 31 |
| Pseudomonas stutzeri RCH2 | 0.57 | Psest_4320 | | Zn-dependent oligopeptidases | 0.52 | Psest_1740 | | RNA polymerase sigma factor, FliA/WhiG family | low | > 67 |
| Pseudomonas segetis P6 | 0.57 | MPMX49_00359 | | Oligopeptidase A | 0.52 | MPMX49_03127 | | RNA polymerase sigma factor FliA | low | > 75 |
| Pseudomonas syringae pv. syringae B728a | 0.57 | Psyr_0045 | | oligopeptidase A, Metallo peptidase, MEROPS family M03A | 0.52 | Psyr_3437 | | RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.57 | Psyr_0045 | | oligopeptidase A, Metallo peptidase, MEROPS family M03A | 0.52 | Psyr_3437 | | RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG | low | > 86 |
| Pseudomonas fluorescens GW456-L13 | 0.57 | PfGW456L13_624 | | Oligopeptidase A (EC 3.4.24.70) | 0.50 | PfGW456L13_4331 | | RNA polymerase sigma factor for flagellar operon | low | > 87 |
| Pseudomonas sp. S08-1 | 0.56 | OH686_12360 | | Oligopeptidase A | 0.54 | OH686_02730 | | RNA polymerase sigma factor for flagellar operon | low | > 80 |
| Pseudomonas sp. SVBP6 | 0.56 | COO64_RS02335 | prlC | oligopeptidase A | 0.51 | COO64_RS25625 | fliA | RNA polymerase sigma factor FliA | low | > 93 |
| Pseudomonas putida KT2440 | 0.56 | PP_0096 | | oligopeptidase A | 0.51 | PP_4341 | | RNA polymerase sigma 28 (sigma F) factor for class III flagellar operons | low | > 96 |
| Pseudomonas simiae WCS417 | 0.56 | PS417_00245 | | oligopeptidase A | 0.51 | PS417_19695 | | flagellar biosynthesis sigma factor | 0.45 | 35 |
| Pseudomonas sp. DMC3 | 0.56 | GFF663 | | Oligopeptidase A | 0.51 | GFF2472 | | RNA polymerase sigma factor FliA | low | > 89 |
| Pseudomonas fluorescens SBW25-INTG | 0.56 | PFLU_RS00240 | | oligopeptidase A | 0.51 | PFLU_RS21660 | | RNA polymerase sigma factor FliA | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.56 | PFLU_RS00240 | | oligopeptidase A | 0.51 | PFLU_RS21660 | | RNA polymerase sigma factor FliA | low | > 109 |
| Pseudomonas sp. RS175 | 0.56 | PFR28_04699 | | Oligopeptidase A | 0.51 | PFR28_00852 | | RNA polymerase sigma factor FliA | low | > 88 |
| Pseudomonas fluorescens FW300-N1B4 | 0.56 | Pf1N1B4_1844 | | Oligopeptidase A (EC 3.4.24.70) | 0.51 | Pf1N1B4_3626 | | RNA polymerase sigma factor for flagellar operon | low | > 87 |
| Pseudomonas lactucae CFBP13502 | 0.56 | GEMAOFIL_00254 | | Oligopeptidase A | 0.51 | GEMAOFIL_04138 | | RNA polymerase sigma factor FliA | low | > 93 |
| Pseudomonas fluorescens FW300-N2E3 | 0.56 | AO353_10775 | | oligopeptidase A | 0.51 | AO353_18785 | | flagellar biosynthesis sigma factor | low | > 101 |
| Pseudomonas sp. BP01 | 0.56 | JOY50_RS21245 | prlC | oligopeptidase A | 0.51 | JOY50_RS00585 | fliA | RNA polymerase sigma factor FliA | low | > 84 |
| Pseudomonas fluorescens FW300-N2E2 | 0.56 | Pf6N2E2_4091 | | Oligopeptidase A (EC 3.4.24.70) | 0.51 | Pf6N2E2_2573 | | RNA polymerase sigma factor for flagellar operon | low | > 103 |
| Pseudomonas fluorescens FW300-N2C3 | 0.56 | AO356_11120 | | oligopeptidase A | 0.51 | AO356_03730 | | flagellar biosynthesis sigma factor | low | > 104 |
| Methylophilus sp. DMC18 | 0.52 | GFF2262 | | Oligopeptidase A | 0.42 | GFF1338 | | RNA polymerase sigma factor FliA | low | > 43 |
| Rhodanobacter sp. FW510-T8 | 0.48 | OKGIIK_15380 | dcp | oligopeptidase A | 0.47 | OKGIIK_02830 | fliA | RNA polymerase sigma factor FliA | low | > 53 |
| Herbaspirillum seropedicae SmR1 | 0.48 | HSERO_RS07290 | | oligopeptidase A | 0.43 | HSERO_RS10160 | | flagellar biosynthesis sigma factor | low | > 78 |
| Paraburkholderia graminis OAS925 | 0.48 | ABIE53_002798 | | oligopeptidase A | 0.42 | ABIE53_000108 | | RNA polymerase sigma factor for flagellar operon FliA | low | > 113 |
| Dechlorosoma suillum PS | 0.48 | Dsui_0046 | | Zn-dependent oligopeptidase | 0.42 | Dsui_1726 | | RNA polymerase sigma factor, FliA/WhiG family | low | > 51 |
| Dyella japonica UNC79MFTsu3.2 | 0.48 | ABZR86_RS14940 | | M3 family metallopeptidase | 0.47 | ABZR86_RS20265 | | RNA polymerase sigma factor FliA | low | > 74 |
| Paraburkholderia sabiae LMG 24235 | 0.48 | QEN71_RS05695 | | M3 family metallopeptidase | 0.42 | QEN71_RS28940 | | RNA polymerase sigma factor FliA | low | > 153 |
| Burkholderia phytofirmans PsJN | 0.48 | BPHYT_RS12875 | | oligopeptidase A | 0.41 | BPHYT_RS18925 | | RNA polymerase sigma70 | low | > 109 |
| Rhodanobacter sp000427505 FW510-R12 | 0.48 | LRK53_RS02390 | | M3 family metallopeptidase | 0.47 | LRK53_RS14995 | | RNA polymerase sigma factor FliA | low | > 59 |
| Cupriavidus basilensis FW507-4G11 | 0.47 | RR42_RS07340 | | oligopeptidase A | 0.39 | RR42_RS35750 | | DNA-directed RNA polymerase sigma-70 factor | low | > 128 |
| Ralstonia solanacearum GMI1000 | 0.47 | RS_RS08035 | | oligopeptidase A | 0.40 | RS_RS23830 | | RNA polymerase sigma factor FliA | low | > 80 |
| Ralstonia sp. UNC404CL21Col | 0.47 | ABZR87_RS13490 | | M3 family metallopeptidase | 0.40 | ABZR87_RS18040 | | RNA polymerase sigma factor FliA | low | > 80 |
| Ralstonia solanacearum UW163 | 0.47 | UW163_RS15000 | | oligopeptidase A | 0.39 | UW163_RS21665 | | RNA polymerase sigma factor FliA | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.47 | RALBFv3_RS01690 | | oligopeptidase A | 0.39 | RALBFv3_RS17485 | | RNA polymerase sigma factor FliA | low | > 76 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.47 | Xcc-8004.4539.1 | | Oligopeptidase A (EC 3.4.24.70) | 0.38 | Xcc-8004.2832.1 | | RNA polymerase sigma factor for flagellar operon | low | > 74 |
| Rhodanobacter denitrificans FW104-10B01 | 0.47 | LRK54_RS08615 | | M3 family metallopeptidase | 0.47 | LRK54_RS13580 | | RNA polymerase sigma factor FliA | low | > 59 |
| Rhodanobacter denitrificans MT42 | 0.47 | LRK55_RS08380 | | M3 family metallopeptidase | 0.47 | LRK55_RS13320 | | RNA polymerase sigma factor FliA | low | > 63 |
| Ralstonia solanacearum PSI07 | 0.47 | RPSI07_RS15795 | | oligopeptidase A | 0.39 | RPSI07_RS06165 | | RNA polymerase sigma factor FliA | low | > 81 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.46 | H281DRAFT_00461 | | oligopeptidase A Metallo peptidase. MEROPS family M03A | 0.42 | H281DRAFT_05756 | | RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG | low | > 103 |
| Variovorax sp. SCN45 | 0.44 | GFF963 | | Oligopeptidase A (EC 3.4.24.70) | 0.39 | GFF5774 | | RNA polymerase sigma factor for flagellar operon | low | > 127 |
| Acidovorax sp. GW101-3H11 | 0.43 | Ac3H11_4097 | | Oligopeptidase A (EC 3.4.24.70) | 0.39 | Ac3H11_1381 | | RNA polymerase sigma factor for flagellar operon | low | > 79 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.43 | GFF4214 | | Oligopeptidase A (EC 3.4.24.70) | 0.41 | GFF1428 | | RNA polymerase sigma factor for flagellar operon | low | > 90 |
| Castellaniella sp019104865 MT123 | 0.42 | ABCV34_RS04180 | | M3 family metallopeptidase | 0.37 | ABCV34_RS05605 | | RNA polymerase sigma factor FliA | low | > 48 |
| Sphingomonas koreensis DSMZ 15582 | 0.22 | Ga0059261_2479 | | Zn-dependent oligopeptidases | 0.29 | Ga0059261_2081 | | RNA polymerase sigma factor, FliA/WhiG family | low | > 68 |
| Lysobacter sp. OAE881 | 0.21 | ABIE51_RS09155 | | M3 family metallopeptidase | 0.44 | ABIE51_RS16865 | | RNA polymerase sigma factor FliA | low | > 62 |
Not shown: 29 genomes with orthologs for CSW01_01010 only; 4 genomes with orthologs for CSW01_10335 only