Conservation of cofitness between CSW01_09620 and CSW01_06085 in Vibrio cholerae E7946 ATCC 55056

75 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_09620 trigger factor 1.0 CSW01_06085 urocanate hydratase 0.67 5
Klebsiella pneumoniae MKP103 0.72 KDGMDA_14600 trigger factor 0.75 KDGMDA_17000 urocanate hydratase low > 95
Serratia liquefaciens MT49 0.71 IAI46_05005 trigger factor 0.76 IAI46_03665 urocanate hydratase low > 86
Rahnella sp. WP5 0.71 EX31_RS22240 trigger factor 0.71 EX31_RS06760 urocanate hydratase low > 89
Escherichia coli ECOR38 0.71 HEPCGN_06955 tig trigger factor 0.70 HEPCGN_01335 hutU urocanate hydratase low > 88
Enterobacter asburiae PDN3 0.71 EX28DRAFT_2535 trigger factor 0.74 EX28DRAFT_2220 urocanate hydratase (EC 4.2.1.49) low > 76
Enterobacter sp. TBS_079 0.71 MPMX20_01027 Trigger factor 0.75 MPMX20_01399 Urocanate hydratase low > 85
Klebsiella michiganensis M5al 0.70 BWI76_RS06520 trigger factor 0.74 BWI76_RS08735 Urocanate hydratase (EC 4.2.1.49) (from data) low > 92
Erwinia amylovora T8 0.70 OLJFJH_17985 trigger factor 0.72 OLJFJH_16545 urocanate hydratase 0.72 28
Dickeya dadantii 3937 0.69 DDA3937_RS05635 trigger factor 0.72 DDA3937_RS14990 urocanate hydratase low > 74
Pantoea agglomerans CFBP13505 P0401 0.69 PagCFBP13505_RS10535 trigger factor 0.71 PagCFBP13505_RS04040 urocanate hydratase low > 74
Pantoea sp. MT58 0.69 IAI47_14660 trigger factor 0.71 IAI47_13280 urocanate hydratase low > 76
Dickeya dianthicola 67-19 0.68 HGI48_RS05680 trigger factor 0.71 HGI48_RS15085 urocanate hydratase low > 71
Dickeya dianthicola ME23 0.68 DZA65_RS06005 trigger factor 0.70 DZA65_RS15830 urocanate hydratase low > 75
Shewanella loihica PV-4 0.65 Shew_2509 tig trigger factor (RefSeq) 0.80 Shew_3757 urocanate hydratase (RefSeq) low > 60
Shewanella sp. ANA-3 0.65 Shewana3_2662 tig trigger factor (RefSeq) 0.79 Shewana3_0100 urocanate hydratase (RefSeq) 0.49 25
Shewanella oneidensis MR-1 0.65 SO1793 tig trigger factor (NCBI ptt file) 0.79 SO0097 hutU urocanate hydratase (NCBI ptt file) 0.34 17
Shewanella amazonensis SB2B 0.64 Sama_1223 tig trigger factor (RefSeq) 0.26 Sama_1632 Urocanate hydratase (EC 4.2.1.49) (from data) low > 62
Alteromonas macleodii MIT1002 0.59 MIT1002_02761 Trigger factor 0.80 MIT1002_00904 Urocanate hydratase low > 70
Pseudomonas sp. S08-1 0.54 OH686_03650 trigger factor 0.76 OH686_16745 urocanate hydratase low > 80
Pseudomonas fluorescens FW300-N2E2 0.54 Pf6N2E2_2219 Cell division trigger factor (EC 5.2.1.8) 0.75 Pf6N2E2_3805 Urocanate hydratase (EC 4.2.1.49) (from data) low > 103
Pseudomonas fluorescens FW300-N2C3 0.53 AO356_01755 trigger factor 0.75 AO356_09630 Urocanate hydratase (EC 4.2.1.49) (from data) low > 104
Pseudomonas segetis P6 0.53 MPMX49_02260 Trigger factor 0.75 MPMX49_03963 Urocanate hydratase low > 75
Pseudomonas sp. BP01 0.52 JOY50_RS25920 tig trigger factor 0.76 JOY50_RS09520 hutU urocanate hydratase low > 84
Pseudomonas sp. RS175 0.52 PFR28_01227 Trigger factor 0.75 PFR28_04965 Urocanate hydratase low > 88
Pseudomonas fluorescens FW300-N2E3 0.52 AO353_20170 trigger factor 0.76 AO353_12250 Urocanate hydratase (EC 4.2.1.49) (from data) low > 101
Pseudomonas simiae WCS417 0.52 PS417_17240 trigger factor 0.75 PS417_01720 Urocanate hydratase (EC 4.2.1.49) (from data) low > 88
Pseudomonas sp. DMC3 0.52 GFF1442 Trigger factor 0.76 GFF4062 Urocanate hydratase low > 89
Pseudomonas fluorescens FW300-N1B4 0.52 Pf1N1B4_3944 Cell division trigger factor (EC 5.2.1.8) 0.76 Pf1N1B4_1587 Urocanate hydratase (EC 4.2.1.49) (from data) — —
Pseudomonas aeruginosa PA14 0.52 IKLFDK_08745 trigger factor 0.76 IKLFDK_28020 urocanate hydratase low > 100
Pseudomonas fluorescens GW456-L13 0.52 PfGW456L13_2551 Cell division trigger factor (EC 5.2.1.8) 0.75 PfGW456L13_326 Urocanate hydratase (EC 4.2.1.49) (from data) low > 87
Pseudomonas fluorescens SBW25-INTG 0.52 PFLU_RS19175 trigger factor 0.75 PFLU_RS01775 urocanate hydratase low > 109
Pseudomonas fluorescens SBW25 0.52 PFLU_RS19175 trigger factor 0.75 PFLU_RS01775 urocanate hydratase low > 109
Pseudomonas syringae pv. syringae B728a 0.52 Psyr_1746 Trigger factor 0.76 Psyr_4828 urocanate hydratase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.52 Psyr_1746 Trigger factor 0.76 Psyr_4828 urocanate hydratase low > 86
Pseudomonas putida KT2440 0.52 PP_2299 Trigger factor 0.76 PP_5033 Urocanate hydratase low > 96
Pseudomonas lactucae CFBP13502 0.51 GEMAOFIL_03744 Trigger factor 0.76 GEMAOFIL_00568 Urocanate hydratase low > 93
Pseudomonas sp. SVBP6 0.51 COO64_RS19190 tig trigger factor 0.76 COO64_RS13410 hutU urocanate hydratase low > 93
Kangiella aquimarina DSM 16071 0.49 B158DRAFT_1033 trigger factor 0.79 B158DRAFT_1433 urocanate hydratase (EC 4.2.1.49) low > 40
Acinetobacter baumannii LAC-4 0.45 RR41_RS16570 trigger factor 0.76 RR41_RS00380 urocanate hydratase low > 55
Paraburkholderia sabiae LMG 24235 0.38 QEN71_RS21990 trigger factor 0.77 QEN71_RS23505 urocanate hydratase low > 153
Hydrogenophaga sp. GW460-11-11-14-LB1 0.38 GFF4040 Cell division trigger factor (EC 5.2.1.8) 0.69 GFF3590 Urocanate hydratase (EC 4.2.1.49) low > 90
Cupriavidus basilensis FW507-4G11 0.38 RR42_RS09015 trigger factor 0.76 RR42_RS14645 urocanate hydratase low > 128
Ralstonia solanacearum UW163 0.37 UW163_RS14665 trigger factor 0.68 UW163_RS08230 urocanate hydratase — —
Ralstonia sp. UNC404CL21Col 0.37 ABZR87_RS12800 trigger factor 0.70 ABZR87_RS01030 urocanate hydratase low > 80
Ralstonia solanacearum IBSBF1503 0.37 RALBFv3_RS01355 trigger factor 0.68 RALBFv3_RS05395 urocanate hydratase — —
Burkholderia phytofirmans PsJN 0.37 BPHYT_RS09445 trigger factor 0.76 BPHYT_RS07565 urocanate hydratase low > 109
Paraburkholderia bryophila 376MFSha3.1 0.37 H281DRAFT_00895 trigger factor 0.76 H281DRAFT_04871 urocanate hydratase low > 103
Acidovorax sp. GW101-3H11 0.37 Ac3H11_934 Cell division trigger factor (EC 5.2.1.8) 0.69 Ac3H11_2557 Urocanate hydratase (EC 4.2.1.49) (from data) low > 79
Ralstonia solanacearum GMI1000 0.37 RS_RS08640 trigger factor 0.68 RS_RS13255 urocanate hydratase low > 80
Ralstonia solanacearum PSI07 0.37 RPSI07_RS16120 trigger factor 0.69 RPSI07_RS11910 urocanate hydratase low > 81
Castellaniella sp019104865 MT123 0.37 ABCV34_RS05140 trigger factor 0.68 ABCV34_RS12785 urocanate hydratase — —
Variovorax sp. SCN45 0.36 GFF490 Cell division trigger factor (EC 5.2.1.8) 0.71 GFF6408 Urocanate hydratase (EC 4.2.1.49) low > 127
Paraburkholderia graminis OAS925 0.36 ABIE53_002114 trigger factor 0.76 ABIE53_001731 urocanate hydratase low > 113
Variovorax sp. OAS795 0.35 ABID97_RS17605 trigger factor 0.70 ABID97_RS03425 urocanate hydratase low > 91
Dyella japonica UNC79MFTsu3.2 0.31 ABZR86_RS07335 trigger factor 0.74 ABZR86_RS07755 urocanate hydratase low > 74
Rhodanobacter sp. FW510-T8 0.30 OKGIIK_08045 tig trigger factor 0.73 OKGIIK_08350 hutU urocanate hydratase low > 52
Rhodanobacter denitrificans MT42 0.30 LRK55_RS16445 trigger factor 0.73 LRK55_RS16070 urocanate hydratase low > 63
Rhodanobacter denitrificans FW104-10B01 0.30 LRK54_RS16720 trigger factor 0.73 LRK54_RS16320 urocanate hydratase low > 59
Lysobacter sp. OAE881 0.29 ABIE51_RS14160 trigger factor 0.72 ABIE51_RS06295 urocanate hydratase low > 62
Rhodospirillum rubrum S1H 0.29 Rru_A1549 Trigger factor (NCBI) 0.75 Rru_A1304 Urocanate hydratase (NCBI) low > 58
Rhodanobacter sp000427505 FW510-R12 0.29 LRK53_RS12150 trigger factor 0.72 LRK53_RS12480 urocanate hydratase low > 59
Xanthomonas campestris pv. campestris strain 8004 0.29 Xcc-8004.4049.1 Cell division trigger factor (EC 5.2.1.8) 0.71 Xcc-8004.3298.1 Urocanate hydratase (EC 4.2.1.49) low > 74
Caulobacter crescentus NA1000 Δfur 0.26 CCNA_02042 trigger factor chaperone 0.73 CCNA_01008 urocanate hydratase low > 67
Sphingobium sp. HT1-2 0.26 GFF4050 Cell division trigger factor (EC 5.2.1.8) 0.75 GFF1214 Urocanate hydratase (EC 4.2.1.49) low > 95
Caulobacter crescentus NA1000 0.26 CCNA_02042 trigger factor chaperone 0.73 CCNA_01008 urocanate hydratase low > 66
Azospirillum sp. SherDot2 0.26 MPMX19_01549 Trigger factor 0.72 MPMX19_04936 Urocanate hydratase — —
Sphingomonas koreensis DSMZ 15582 0.25 Ga0059261_0089 trigger factor 0.75 Ga0059261_3961 Urocanate hydratase (EC 4.2.1.49) (from data) low > 68
Brevundimonas sp. GW460-12-10-14-LB2 0.25 A4249_RS06500 trigger factor 0.69 A4249_RS06625 urocanate hydratase — —
Azospirillum brasilense Sp245 0.24 AZOBR_RS07130 trigger factor 0.73 AZOBR_RS21740 urocanate hydratase low > 97
Sinorhizobium meliloti 1021 0.24 SMc02050 trigger factor 0.72 SM_b21163 Urocanate hydratase (EC 4.2.1.49) (from data) low > 103
Agrobacterium fabrum C58 0.24 Atu1664 trigger factor 0.72 Atu3931 urocanate hydratase — —
Rhizobium sp. OAE497 0.24 ABIE40_RS08600 trigger factor 0.72 ABIE40_RS20360 urocanate hydratase low > 107
Bosea sp. OAE506 0.23 ABIE41_RS18065 trigger factor 0.72 ABIE41_RS23655 urocanate hydratase low > 77
Phaeobacter inhibens DSM 17395 0.22 PGA1_c18160 trigger factor Tig 0.72 PGA1_c36320 Urocanate hydratase (EC 4.2.1.49) (from data) low > 62
Pontibacter actiniarum KMM 6156, DSM 19842 0.08 CA264_01415 trigger factor 0.58 CA264_08875 urocanate hydratase 0.41 68

Not shown: 33 genomes with orthologs for CSW01_09620 only; 7 genomes with orthologs for CSW01_06085 only