Conservation of cofitness between CSW01_13155 and CSW01_03980 in Vibrio cholerae E7946 ATCC 55056

90 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_13155 ribonuclease R 1.0 CSW01_03980 IMP dehydrogenase 0.80 18
Pectobacterium carotovorum WPP14 0.62 HER17_RS03835 ribonuclease R 0.77 HER17_RS06155 IMP dehydrogenase low > 75
Erwinia amylovora T8 0.62 OLJFJH_02470 ribonuclease R 0.73 OLJFJH_10500 IMP dehydrogenase low > 58
Escherichia coli ECRC100 0.62 OKFHMN_12220 rnr ribonuclease R 0.75 OKFHMN_21760 guaB IMP dehydrogenase low > 79
Escherichia coli ECRC99 0.62 KEDOAH_15935 rnr ribonuclease R 0.75 KEDOAH_06460 guaB IMP dehydrogenase — —
Escherichia coli ECRC101 0.62 MCAODC_02735 rnr ribonuclease R 0.75 MCAODC_12290 guaB IMP dehydrogenase low > 87
Escherichia coli ECRC98 0.62 JDDGAC_15860 rnr ribonuclease R 0.75 JDDGAC_25435 guaB IMP dehydrogenase low > 87
Escherichia coli ECRC102 0.62 NIAGMN_10070 rnr ribonuclease R 0.75 NIAGMN_19530 guaB IMP dehydrogenase low > 80
Dickeya dianthicola 67-19 0.61 HGI48_RS17315 ribonuclease R 0.76 HGI48_RS15535 IMP dehydrogenase low > 71
Escherichia fergusonii Becca 0.61 EFB2_04356 Ribonuclease R 0.75 EFB2_01385 Inosine-5'-monophosphate dehydrogenase low > 86
Escherichia coli ECOR27 0.61 NOLOHH_04485 rnr ribonuclease R 0.75 NOLOHH_13410 guaB IMP dehydrogenase low > 75
Escherichia coli BW25113 0.61 b4179 vacB putative enzyme (VIMSS) 0.75 b2508 guaB inositol-5-monophosphate dehydrogenase (NCBI) — —
Escherichia coli BL21 0.61 ECD_04046 exoribonuclease R, RNase R 0.75 ECD_02400 IMP dehydrogenase low > 61
Escherichia coli Nissle 1917 0.61 ECOLIN_RS24265 ribonuclease R 0.75 ECOLIN_RS14240 IMP dehydrogenase low > 55
Escherichia coli ECRC62 0.61 BNILDI_07005 rnr ribonuclease R 0.75 BNILDI_12210 guaB IMP dehydrogenase low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.61 GFF832 '3'-to-5' exoribonuclease RNase R' transl_table=11 0.77 GFF2160 'Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) / CBS domain' transl_table=11 low > 78
Escherichia coli HS(pFamp)R (ATCC 700891) 0.61 OHPLBJKB_03863 Ribonuclease R 0.75 OHPLBJKB_01201 'Inosine-5'-monophosphate dehydrogenase' transl_table=11 low > 74
Escherichia coli ECOR38 0.61 HEPCGN_10450 rnr ribonuclease R 0.75 HEPCGN_20900 guaB IMP dehydrogenase low > 88
Rahnella sp. WP5 0.61 EX31_RS08785 ribonuclease R 0.76 EX31_RS20450 IMP dehydrogenase 0.51 68
Klebsiella michiganensis M5al 0.61 BWI76_RS02575 exoribonuclease R 0.76 BWI76_RS21030 IMP dehydrogenase — —
Klebsiella pneumoniae MKP103 0.61 KDGMDA_11075 ribonuclease R 0.77 KDGMDA_28160 IMP dehydrogenase — —
Klebsiella pneumoniae MRSN742743 0.61 GJGHJB_04566 rnr ribonuclease R 0.77 GJGHJB_01274 guaB IMP dehydrogenase — —
Dickeya dianthicola ME23 0.61 DZA65_RS18405 ribonuclease R 0.76 DZA65_RS16610 IMP dehydrogenase 0.60 10
Dickeya dadantii 3937 0.61 DDA3937_RS17260 ribonuclease R 0.76 DDA3937_RS15420 IMP dehydrogenase low > 74
Erwinia tracheiphila SCR3 0.61 LU632_RS21750 rnr ribonuclease R 0.76 LU632_RS17755 guaB IMP dehydrogenase — —
Erwinia tracheiphila HP pepo 2.2 0.61 IJEDHG_13230 rnr ribonuclease R 0.76 IJEDHG_02725 guaB IMP dehydrogenase — —
Enterobacter sp. TBS_079 0.60 MPMX20_00460 Ribonuclease R 0.76 MPMX20_03382 Inosine-5'-monophosphate dehydrogenase low > 85
Enterobacter asburiae PDN3 0.60 EX28DRAFT_3376 ribonuclease R 0.76 EX28DRAFT_0139 inosine-5'-monophosphate dehydrogenase — —
Serratia liquefaciens MT49 0.60 IAI46_01660 ribonuclease R 0.77 IAI46_19210 IMP dehydrogenase — —
Pantoea agglomerans CFBP13505 P0401 0.60 PagCFBP13516_RS02640 rnr ribonuclease R 0.76 PagCFBP13516_RS05395 guaB IMP dehydrogenase — —
Pantoea sp. MT58 0.60 IAI47_02625 ribonuclease R 0.77 IAI47_05105 IMP dehydrogenase — —
Shewanella loihica PV-4 0.57 Shew_3289 ribonuclease R (RefSeq) 0.76 Shew_1297 inositol-5-monophosphate dehydrogenase (RefSeq) — —
Shewanella sp. ANA-3 0.56 Shewana3_0697 RNAse R (RefSeq) 0.78 Shewana3_1235 inosine 5'-monophosphate dehydrogenase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.55 SO3935 vacB ribonuclease R (NCBI ptt file) 0.77 SO3293 guaB inosine-5'-monophosphate dehydrogenase (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.54 Sama_3067 exoribonuclease II (RefSeq) 0.77 Sama_2359 inosine 5'-monophosphate dehydrogenase (RefSeq) — —
Alteromonas macleodii MIT1002 0.52 MIT1002_03606 Ribonuclease R 0.71 MIT1002_02779 Inosine-5'-monophosphate dehydrogenase — —
Pseudomonas aeruginosa PA14 0.48 IKLFDK_28865 ribonuclease R 0.61 IKLFDK_19415 IMP dehydrogenase — —
Pseudomonas aeruginosa PUPa3 0.47 NPBIFN_05247 rnr ribonuclease R 0.61 NPBIFN_01210 guaB IMP dehydrogenase — —
Pseudomonas aeruginosa MRSN321 0.47 PFGADD_05171 rnr ribonuclease R 0.61 PFGADD_01192 guaB IMP dehydrogenase — —
Pseudomonas syringae pv. syringae B728a 0.47 Psyr_0579 RNAse R 0.65 Psyr_1261 inosine-5'-monophosphate dehydrogenase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.47 Psyr_0579 RNAse R 0.65 Psyr_1261 inosine-5'-monophosphate dehydrogenase — —
Pseudomonas fluorescens GW456-L13 0.47 PfGW456L13_144 3'-to-5' exoribonuclease RNase R 0.63 PfGW456L13_4818 Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) / CBS domain — —
Pseudomonas fluorescens FW300-N2E3 0.47 AO353_13200 exoribonuclease R 0.64 AO353_15950 inosine-5'-monophosphate dehydrogenase — —
Pseudomonas fluorescens FW300-N1B4 0.47 Pf1N1B4_1403 3'-to-5' exoribonuclease RNase R 0.64 Pf1N1B4_840 Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) / CBS domain — —
Pseudomonas fluorescens FW300-N2C3 0.47 AO356_08610 exoribonuclease R 0.65 AO356_06525 inosine-5'-monophosphate dehydrogenase — —
Pseudomonas sp. RS175 0.47 PFR28_05130 Ribonuclease R 0.65 PFR28_00310 'Inosine-5'-monophosphate dehydrogenase' transl_table=11 — —
Pseudomonas fluorescens FW300-N2E2 0.47 Pf6N2E2_3607 3'-to-5' exoribonuclease RNase R 0.65 Pf6N2E2_3165 Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) / CBS domain — —
Pseudomonas segetis P6 0.47 ACVTMO_RS20555 rnr ribonuclease R 0.68 ACVTMO_RS07630 guaB IMP dehydrogenase — —
Pseudomonas sp. FW215-L2 0.47 GFF2388 Ribonuclease R 0.63 GFF3913 Inosine-5'-monophosphate dehydrogenase — —
Pseudomonas lactucae CFBP13502 0.47 GEMAOFIL_00747 Ribonuclease R 0.63 GEMAOFIL_04768 'Inosine-5'-monophosphate dehydrogenase' transl_table=11 — —
Kangiella aquimarina DSM 16071 0.47 B158DRAFT_1989 ribonuclease R 0.70 B158DRAFT_1158 inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) — —
Pseudomonas sp. SVBP6 0.47 COO64_RS17955 rnr ribonuclease R 0.63 COO64_RS04660 guaB IMP dehydrogenase — —
Pseudomonas sp. DMC3 0.47 GFF3229 Ribonuclease R 0.65 GFF4327 Inosine-5'-monophosphate dehydrogenase — —
Pseudomonas protegens RBAN4 0.47 FABNJH_02985 rnr ribonuclease R 0.65 FABNJH_24990 Inosine-5'-monophosphate dehydrogenase — —
Pseudomonas orientalis W4I3 0.47 QF045_RS05605 ribonuclease R 0.64 QF045_RS25300 IMP dehydrogenase — —
Pseudomonas putida KT2440 0.47 PP_4880 exoribonuclease R 0.64 PP_1031 IMP dehydrogenase and single strand DNA binding factor — —
Pseudomonas simiae WCS417 0.46 PS417_02555 exoribonuclease R 0.64 PS417_23075 inosine-5-monophosphate dehydrogenase — —
Pseudomonas fluorescens SBW25-INTG 0.46 PFLU_RS02625 ribonuclease R 0.64 PFLU_RS24735 IMP dehydrogenase — —
Pseudomonas fluorescens SBW25 0.46 PFLU_RS02625 ribonuclease R 0.64 PFLU_RS24735 IMP dehydrogenase — —
Pseudomonas sp. S08-1 0.46 OH686_15910 ribonuclease R 0.65 OH686_17590 inosine-5'-monophosphate dehydrogenase — —
Pseudomonas sp. BP01 0.46 JOY50_RS17320 rnr ribonuclease R 0.64 JOY50_RS11500 guaB IMP dehydrogenase — —
Pseudomonas stutzeri RCH2 0.46 Psest_0691 ribonuclease R 0.64 Psest_1286 inosine-5'-monophosphate dehydrogenase — —
Dechlorosoma suillum PS 0.43 Dsui_3128 ribonuclease R 0.63 Dsui_2671 inosine-5''-monophosphate dehydrogenase — —
Methylophilus sp. DMC18 0.43 GFF635 Ribonuclease R 0.66 GFF1138 Inosine-5'-monophosphate dehydrogenase — —
Marinobacter adhaerens HP15 0.43 HP15_622 exoribonuclease R 0.64 HP15_2051 inositol-5-monophosphate dehydrogenase — —
Cupriavidus basilensis FW507-4G11 0.42 RR42_RS13065 ribonuclease R 0.62 RR42_RS11750 inosine-5-monophosphate dehydrogenase — —
Ralstonia solanacearum PSI07 0.41 RPSI07_RS18030 ribonuclease R 0.63 RPSI07_RS16975 IMP dehydrogenase — —
Rhodanobacter sp000427505 FW510-R12 0.41 LRK53_RS09655 ribonuclease R 0.62 LRK53_RS11160 IMP dehydrogenase — —
Ralstonia solanacearum GMI1000 0.41 RS_RS06155 ribonuclease R 0.63 RS_RS07170 IMP dehydrogenase — —
Dyella japonica UNC79MFTsu3.2 0.41 ABZR86_RS08270 ribonuclease R 0.64 ABZR86_RS05410 IMP dehydrogenase — —
Rhodanobacter sp. FW510-T8 0.41 OKGIIK_06755 rnr ribonuclease R 0.62 OKGIIK_07095 guaB IMP dehydrogenase — —
Ralstonia sp. UNC404CL21Col 0.41 ABZR87_RS10985 ribonuclease R 0.61 ABZR87_RS11965 IMP dehydrogenase — —
Lysobacter sp. OAE881 0.40 ABIE51_RS07475 ribonuclease R 0.59 ABIE51_RS09475 IMP dehydrogenase — —
Ralstonia solanacearum IBSBF1503 0.40 RALBFv3_RS15345 ribonuclease R 0.63 RALBFv3_RS00515 IMP dehydrogenase — —
Ralstonia solanacearum UW163 0.40 UW163_RS12810 ribonuclease R 0.63 UW163_RS13845 IMP dehydrogenase — —
Rhodanobacter denitrificans MT42 0.40 LRK55_RS00235 ribonuclease R 0.62 LRK55_RS18100 IMP dehydrogenase — —
Rhodanobacter denitrificans FW104-10B01 0.40 LRK54_RS00495 ribonuclease R 0.63 LRK54_RS00105 IMP dehydrogenase — —
Paraburkholderia sabiae LMG 24235 0.40 QEN71_RS22925 ribonuclease R 0.64 QEN71_RS06540 IMP dehydrogenase — —
Burkholderia phytofirmans PsJN 0.40 BPHYT_RS08455 ribonuclease R 0.62 BPHYT_RS12020 inosine 5'-monophosphate dehydrogenase — —
Paraburkholderia bryophila 376MFSha3.1 0.40 H281DRAFT_00712 RNAse R 0.63 H281DRAFT_00634 inosine-5'-monophosphate dehydrogenase — —
Paraburkholderia graminis OAS925 0.40 ABIE53_001940 ribonuclease R 0.63 ABIE53_002478 IMP dehydrogenase — —
Xanthomonas campestris pv. campestris strain 8004 0.39 Xcc-8004.3370.1 3'-to-5' exoribonuclease RNase R 0.61 Xcc-8004.2391.1 Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) / CBS domain — —
Herbaspirillum seropedicae SmR1 0.39 HSERO_RS09290 ribonuclease R 0.62 HSERO_RS11015 inosine 5'-monophosphate dehydrogenase — —
Collimonas humicola GW821-FHT01A05 0.38 MPMX01_02283 Ribonuclease R 0.63 MPMX01_03347 Inosine-5'-monophosphate dehydrogenase — —
Castellaniella sp019104865 MT123 0.37 ABCV34_RS06625 ribonuclease R 0.61 ABCV34_RS04905 IMP dehydrogenase — —
Acidovorax sp. GW101-3H11 0.35 Ac3H11_412 3'-to-5' exoribonuclease RNase R 0.62 Ac3H11_2857 Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) — —
Acinetobacter radioresistens SK82 0.35 MPMX26_02684 Ribonuclease R 0.62 MPMX26_02920 Inosine-5'-monophosphate dehydrogenase — —
Variovorax sp. OAS795 0.35 ABID97_RS17200 ribonuclease R 0.60 ABID97_RS16415 IMP dehydrogenase — —
Acinetobacter baumannii LAC-4 0.34 RR41_RS02345 ribonuclease R 0.61 RR41_RS00905 IMP dehydrogenase — —
Variovorax sp. SCN45 0.34 GFF399 3'-to-5' exoribonuclease RNase R 0.61 GFF209 Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) / CBS domain — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.34 GFF4921 3'-to-5' exoribonuclease RNase R 0.62 GFF4356 Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) — —

Not shown: 0 genomes with orthologs for CSW01_13155 only; 34 genomes with orthologs for CSW01_03980 only