| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_01520 | | acetyl-coenzyme A synthetase | 1.0 | CSW01_01280 | | GDP-mannose 4,6-dehydratase | 0.94 | 8 |
| Pectobacterium carotovorum WPP14 | 0.78 | HER17_RS17630 | | acetate--CoA ligase | 0.78 | HER17_RS14540 | | GDP-mannose 4,6-dehydratase | low | > 75 |
| Rahnella sp. WP5 | 0.78 | EX31_RS09040 | | acetate--CoA ligase | 0.52 | EX31_RS02865 | | GDP-mannose 4,6-dehydratase | low | > 89 |
| Dickeya dadantii 3937 | 0.77 | DDA3937_RS03480 | | acetate--CoA ligase | 0.87 | DDA3937_RS18665 | | GDP-mannose 4,6-dehydratase | 0.68 | 4 |
| Pantoea sp. MT58 | 0.77 | IAI47_17715 | | acetate--CoA ligase | 0.11 | IAI47_18500 | | dTDP-glucose 4,6-dehydratase | — | — |
| Dickeya dianthicola 67-19 | 0.77 | HGI48_RS03580 | | acetate--CoA ligase | 0.87 | HGI48_RS18595 | | GDP-mannose 4,6-dehydratase | low | > 71 |
| Erwinia amylovora T8 | 0.77 | OLJFJH_03335 | | acetate--CoA ligase | 0.10 | OLJFJH_12090 | | dTDP-glucose 4 6-dehydratase | — | — |
| Escherichia coli BW25113 | 0.77 | b4069 | acs | acetyl-coenzyme A synthetase (NCBI) | 0.83 | b2053 | gmd | GDP-D-mannose dehydratase, NAD(P)-binding (NCBI) | low | > 76 |
| Escherichia coli ECRC62 | 0.77 | BNILDI_06445 | acs | acetate--CoA ligase | 0.83 | BNILDI_14585 | | GDP-mannose 4,6-dehydratase | low | > 75 |
| Dickeya dianthicola ME23 | 0.77 | DZA65_RS03695 | | acetate--CoA ligase | 0.87 | DZA65_RS19730 | | GDP-mannose 4,6-dehydratase | low | > 75 |
| Escherichia coli BL21 | 0.77 | ECD_03941 | | acetyl-CoA synthetase | 0.83 | ECD_01959 | | GDP-D-mannose dehydratase, NAD(P)-binding | low | > 61 |
| Pantoea agglomerans CFBP13505 P0401 | 0.77 | PagCFBP13505_RS21040 | | acetate--CoA ligase | 0.46 | PagCFBP13505_RS01140 | | GDP-mannose 4,6-dehydratase | low | > 74 |
| Escherichia coli ECOR27 | 0.77 | NOLOHH_05080 | acs | acetate--CoA ligase | 0.83 | NOLOHH_15675 | | GDP-mannose 4,6-dehydratase | low | > 76 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.77 | OHPLBJKB_03971 | | Acetyl-coenzyme A synthetase | 0.10 | OHPLBJKB_04266 | | dTDP-glucose 4,6-dehydratase 2 | low | > 74 |
| Escherichia coli ECOR38 | 0.77 | HEPCGN_11455 | acs | acetate--CoA ligase | 0.83 | HEPCGN_03045 | | GDP-mannose 4,6-dehydratase | low | > 88 |
| Enterobacter asburiae PDN3 | 0.77 | EX28DRAFT_4232 | | acetate--CoA ligase | 0.83 | EX28DRAFT_0502 | | GDP-mannose 4,6-dehydratase | low | > 76 |
| Enterobacter sp. TBS_079 | 0.77 | MPMX20_00291 | | Acetyl-coenzyme A synthetase | 0.82 | MPMX20_03035 | | GDP-mannose 4,6-dehydratase | low | > 85 |
| Escherichia coli ECRC99 | 0.77 | KEDOAH_15320 | acs | acetate--CoA ligase | 0.83 | KEDOAH_03710 | | GDP-mannose 4,6-dehydratase | — | — |
| Escherichia coli ECRC102 | 0.77 | NIAGMN_10675 | acs | acetate--CoA ligase | 0.83 | NIAGMN_22385 | | GDP-mannose 4,6-dehydratase | low | > 80 |
| Escherichia coli ECRC100 | 0.77 | OKFHMN_12830 | acs | acetate--CoA ligase | 0.83 | OKFHMN_24440 | | GDP-mannose 4,6-dehydratase | — | — |
| Escherichia coli ECRC98 | 0.77 | JDDGAC_16465 | acs | acetate--CoA ligase | 0.83 | JDDGAC_28550 | | GDP-mannose 4,6-dehydratase | — | — |
| Escherichia coli ECRC101 | 0.77 | MCAODC_03340 | acs | acetate--CoA ligase | 0.83 | MCAODC_20500 | | GDP-mannose 4,6-dehydratase | — | — |
| Escherichia fergusonii Becca | 0.77 | EFB2_04520 | | Acetyl-coenzyme A synthetase | 0.83 | EFB2_01801 | | GDP-mannose 4,6-dehydratase | low | > 86 |
| Escherichia coli Nissle 1917 | 0.76 | ECOLIN_RS23550 | | acetate--CoA ligase | 0.82 | ECOLIN_RS12095 | | GDP-mannose 4,6-dehydratase | low | > 55 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.76 | GFF1452 | | Acetyl-coenzyme A synthetase (EC 6.2.1.1) | 0.83 | GFF3875 | | GDP-mannose 4,6-dehydratase (EC 4.2.1.47) | low | > 78 |
| Pseudomonas putida KT2440 | 0.75 | PP_4487 | | acetyl-CoA synthetase | 0.46 | PP_1799 | | GDP-mannose 4,6-dehydratase | low | > 96 |
| Pseudomonas sp. SVBP6 | 0.75 | COO64_RS21645 | acs | acetate--CoA ligase | 0.45 | COO64_RS06615 | gmd | GDP-mannose 4,6-dehydratase | low | > 93 |
| Pseudomonas sp. S08-1 | 0.75 | OH686_21250 | | acetate--CoA ligase | 0.40 | OH686_11980 | | GDP-mannose 4,6-dehydratase | low | > 80 |
| Pseudomonas segetis P6 | 0.74 | MPMX49_01868 | | Acetyl-coenzyme A synthetase | 0.43 | MPMX49_00388 | | GDP-mannose 4,6-dehydratase | low | > 75 |
| Pseudomonas sp. RS175 | 0.74 | PFR28_03289 | | Acetyl-coenzyme A synthetase | 0.40 | PFR28_04554 | | GDP-mannose 4,6-dehydratase | low | > 88 |
| Pseudomonas fluorescens FW300-N2C3 | 0.74 | AO356_18695 | | Acetyl-coenzyme A synthetase (EC 6.2.1.1) (from data) | 0.40 | AO356_11835 | | GDP-mannose 4,6-dehydratase | low | > 104 |
| Pseudomonas fluorescens FW300-N2E2 | 0.74 | Pf6N2E2_5659 | | Acetyl-coenzyme A synthetase (EC 6.2.1.1) | 0.40 | Pf6N2E2_4242 | | GDP-mannose 4,6-dehydratase (EC 4.2.1.47) | low | > 103 |
| Pseudomonas fluorescens FW300-N1B4 | 0.73 | Pf1N1B4_3430 | | Acetyl-coenzyme A synthetase (EC 6.2.1.1) | 0.39 | Pf1N1B4_1965 | | GDP-mannose 4,6-dehydratase (EC 4.2.1.47) | low | > 87 |
| Pseudomonas aeruginosa PA14 | 0.73 | IKLFDK_03940 | | acetate--CoA ligase | 0.39 | IKLFDK_26150 | | GDP-mannose 4 6-dehydratase | low | > 100 |
| Pseudomonas fluorescens GW456-L13 | 0.73 | PfGW456L13_1963 | | Acetyl-coenzyme A synthetase (EC 6.2.1.1) | 0.40 | PfGW456L13_2338 | | GDP-mannose 4,6-dehydratase (EC 4.2.1.47) | low | > 87 |
| Pseudomonas fluorescens FW300-N2E3 | 0.73 | AO353_03060 | | Acetyl-coenzyme A synthetase (EC 6.2.1.1) (from data) | 0.42 | AO353_10245 | | GDP-mannose 4,6-dehydratase | low | > 101 |
| Pseudomonas fluorescens SBW25 | 0.73 | PFLU_RS23355 | | acetate--CoA ligase | 0.77 | PFLU_RS17890 | | GDP-mannose 4,6-dehydratase | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.73 | PFLU_RS23355 | | acetate--CoA ligase | 0.77 | PFLU_RS17890 | | GDP-mannose 4,6-dehydratase | low | > 109 |
| Pseudomonas syringae pv. syringae B728a | 0.73 | Psyr_3572 | | acetyl-coenzyme A synthetase | 0.45 | Psyr_0916 | | GDP-mannose 4,6-dehydratase | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.73 | Psyr_3572 | | acetyl-coenzyme A synthetase | 0.45 | Psyr_0916 | | GDP-mannose 4,6-dehydratase | low | > 86 |
| Pseudomonas sp. DMC3 | 0.73 | GFF4887 | | Acetyl-coenzyme A synthetase | 0.40 | GFF545 | | GDP-mannose 4,6-dehydratase | low | > 89 |
| Pseudomonas lactucae CFBP13502 | 0.73 | GEMAOFIL_04492 | | Acetyl-coenzyme A synthetase | 0.46 | GEMAOFIL_04278 | | GDP-mannose 4,6-dehydratase | low | > 93 |
| Azospirillum brasilense Sp245 | 0.70 | AZOBR_RS00270 | | acetyl-CoA synthetase | 0.44 | AZOBR_RS33465 | | GDP-mannose 4 6-dehydratase | low | > 97 |
| Pseudomonas stutzeri RCH2 | 0.69 | Psest_2657 | | acetate--CoA ligase | 0.83 | Psest_1818 | | GDP-mannose 4,6-dehydratase | low | > 67 |
| Magnetospirillum magneticum AMB-1 | 0.69 | AMB_RS21140 | | acetate--CoA ligase | 0.63 | AMB_RS05505 | | GDP-mannose 4,6-dehydratase | low | > 64 |
| Xanthobacter sp. DMC5 | 0.69 | GFF160 | | Acetyl-coenzyme A synthetase | 0.10 | GFF1115 | | dTDP-glucose 4,6-dehydratase 2 | — | — |
| Azospirillum sp. SherDot2 | 0.69 | MPMX19_02038 | | Acetyl-coenzyme A synthetase | 0.63 | MPMX19_06644 | | GDP-mannose 4,6-dehydratase | low | > 112 |
| Rhodospirillum rubrum S1H | 0.69 | Rru_A3575 | | Acetate--CoA ligase (NCBI) | 0.63 | Rru_A0253 | | GDP-mannose 4,6-dehydratase (NCBI) | low | > 58 |
| Rhodopseudomonas palustris CGA009 | 0.68 | TX73_001095 | | acetate--CoA ligase | 0.45 | TX73_020470 | | GDP-mannose 4,6-dehydratase | low | > 86 |
| Bosea sp. OAE506 | 0.68 | ABIE41_RS05675 | | acetate--CoA ligase | 0.44 | ABIE41_RS02910 | | GDP-mannose 4,6-dehydratase | low | > 77 |
| Agrobacterium fabrum C58 | 0.68 | Atu2745 | | acetyl-coenzyme A synthetase | 0.59 | Atu4789 | | GDP-mannose 4,6-dehydratase | low | > 89 |
| Rhodanobacter denitrificans MT42 | 0.66 | LRK55_RS08185 | | acetate--CoA ligase | 0.68 | LRK55_RS03650 | | GDP-mannose 4,6-dehydratase | low | > 63 |
| Rhodanobacter denitrificans FW104-10B01 | 0.66 | LRK54_RS08420 | | acetate--CoA ligase | 0.15 | LRK54_RS05640 | | GDP-mannose 4,6-dehydratase | low | > 59 |
| Sphingobium sp. HT1-2 | 0.65 | GFF4891 | | Acetyl-CoA synthetase (EC 6.2.1.1) | 0.11 | GFF4227 | | dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) | low | > 95 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.64 | Xcc-8004.5157.1 | | Acetyl-coenzyme A synthetase (EC 6.2.1.1) | 0.46 | Xcc-8004.4503.1 | | GDP-mannose 4,6-dehydratase (EC 4.2.1.47) | low | > 74 |
| Dinoroseobacter shibae DFL-12 | 0.64 | Dshi_3553 | | acetate--CoA ligase (RefSeq) | 0.63 | Dshi_4139 | | GDP-mannose 4,6-dehydratase (RefSeq) | — | — |
| Caulobacter crescentus NA1000 | 0.64 | CCNA_03696 | | acetyl-coenzyme A synthetase | 0.63 | CCNA_00472 | | GDP-mannose 4,6 dehydratase | low | > 66 |
| Caulobacter crescentus NA1000 Δfur | 0.64 | CCNA_03696 | | acetyl-coenzyme A synthetase | 0.63 | CCNA_00472 | | GDP-mannose 4,6 dehydratase | low | > 67 |
| Rhodanobacter sp. FW510-T8 | 0.64 | OKGIIK_15190 | acs | acetate--CoA ligase | 0.44 | OKGIIK_01210 | gmd | GDP-mannose 4,6-dehydratase | low | > 53 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.64 | A4249_RS15190 | | acetate--CoA ligase | 0.43 | A4249_RS12980 | | GDP-mannose 4,6-dehydratase | low | > 48 |
| Phaeobacter inhibens DSM 17395 | 0.61 | PGA1_c12950 | | acetyl-coenzyme A synthetase Acs | 0.81 | PGA1_65p00310 | | GDP-mannose 4,6-dehydratase Gmd | low | > 62 |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.55 | CA265_RS16340 | | acetate--CoA ligase | 0.70 | CA265_RS19210 | | GDP-mannose 4,6-dehydratase | — | — |
| Desulfovibrio vulgaris Miyazaki F | 0.54 | DvMF_1775 | | acetate/CoA ligase (RefSeq) | 0.67 | DvMF_2694 | | GDP-mannose 4,6-dehydratase (RefSeq) | low | > 51 |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.54 | DVU2969 | | acetoacetyl-CoA synthase (TIGR) | 0.69 | DVU0448 | gmd | GDP-mannose 4,6-dehydratase (TIGR) | low | > 55 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.53 | Echvi_1268 | | acetate--CoA ligase | 0.66 | Echvi_4398 | | GDP-mannose 4,6-dehydratase | low | > 79 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.52 | ABZR88_RS15400 | | acetate--CoA ligase | 0.67 | ABZR88_RS18375 | | GDP-mannose 4,6-dehydratase | — | — |
| Synechococcus elongatus PCC 7942 | 0.52 | Synpcc7942_1352 | acsA | acetyl-CoA synthetase | 0.71 | Synpcc7942_1342 | gmd | GDP-mannose 4,6-dehydratase | — | — |
| Cellulophaga baltica 18 | 0.51 | M666_RS12955 | | acetate--CoA ligase | 0.66 | M666_RS03410 | | GDP-mannose 4,6-dehydratase | low | > 67 |
| Synechocystis sp000284455 PCC 6803 | 0.51 | SGL_RS15030 | | acetate--CoA ligase | 0.54 | SGL_RS01905 | | GDP-mannose 4,6-dehydratase | low | > 52 |
| Castellaniella sp019104865 MT123 | 0.49 | ABCV34_RS00680 | | acetate--CoA ligase | 0.71 | ABCV34_RS12935 | | GDP-mannose 4,6-dehydratase | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.49 | RR42_RS13880 | | AMP-dependent synthetase | 0.76 | RR42_RS33235 | | GDP-mannose 4,6-dehydratase | low | > 128 |
| Paraburkholderia sabiae LMG 24235 | 0.49 | QEN71_RS23765 | | acetate--CoA ligase | 0.70 | QEN71_RS26360 | | GDP-mannose 4,6-dehydratase | low | > 153 |
| Paraburkholderia graminis OAS925 | 0.49 | ABIE53_001664 | | acetyl-CoA synthetase | 0.68 | ABIE53_000940 | | GDPmannose 4,6-dehydratase | low | > 113 |
| Burkholderia phytofirmans PsJN | 0.49 | BPHYT_RS07000 | | acetyl-CoA synthetase | 0.69 | BPHYT_RS04000 | | GDP-mannose 4,6-dehydratase | low | > 109 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.49 | H281DRAFT_04953 | | acetyl-coenzyme A synthetase | 0.69 | H281DRAFT_04776 | | GDPmannose 4,6-dehydratase | low | > 103 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.48 | GFF4107 | | Acetyl-coenzyme A synthetase (EC 6.2.1.1) | 0.78 | GFF2554 | | GDP-mannose 4,6-dehydratase (EC 4.2.1.47) | low | > 90 |
| Dechlorosoma suillum PS | 0.48 | Dsui_2003 | | acetate--CoA ligase | 0.71 | Dsui_0085 | | GDP-mannose 4,6-dehydratase | low | > 51 |
| Variovorax sp. OAS795 | 0.47 | ABID97_RS27430 | | acetate--CoA ligase | 0.44 | ABID97_RS05705 | | GDP-mannose 4,6-dehydratase | low | > 91 |
| Ralstonia solanacearum PSI07 | 0.47 | RPSI07_RS14880 | | acetate--CoA ligase | 0.47 | RPSI07_RS19840 | | GDP-mannose 4,6-dehydratase | low | > 81 |
| Variovorax sp. SCN45 | 0.46 | GFF475 | | Acetyl-CoA synthetase (EC 6.2.1.1) | 0.74 | GFF61 | | GDP-mannose 4,6-dehydratase (EC 4.2.1.47) | low | > 127 |
| Mycobacterium tuberculosis H37Rv | 0.45 | Rv3667 | | Acetyl-coenzyme A synthetase Acs (acetate--CoA ligase) (acetyl-CoA synthetase) (acetyl-CoA synthase) (acyl-activating enzyme) (acetate thiokinase) (acetyl-activating enzyme) (acetate--coenzyme A ligase) (acetyl-coenzyme A synthase) | 0.48 | Rv1511 | | GDP-D-mannose dehydratase GmdA (GDP-mannose 4,6 dehydratase) (GMD) | low | > 58 |
| Bacteroides thetaiotaomicron VPI-5482 | 0.14 | BT3755 | | acetyl-coenzyme A synthetase (NCBI ptt file) | 0.60 | BT1224 | | GDP-mannose 4,6-dehydratase (NCBI ptt file) | — | — |
| Bacteroides stercoris CC31F | 0.13 | HMPREF1181_RS03430 | | AMP-binding protein | 0.60 | HMPREF1181_RS12530 | | GDP-mannose 4,6-dehydratase | low | > 56 |
| Parabacteroides merdae CL09T00C40 | 0.13 | HMPREF1078_RS10645 | | AMP-binding protein | 0.63 | HMPREF1078_RS00185 | | GDP-mannose 4,6-dehydratase | 0.87 | 35 |
| Phocaeicola vulgatus CL09T03C04 | 0.12 | HMPREF1058_RS08765 | | AMP-binding protein | 0.61 | HMPREF1058_RS06615 | | GDP-mannose 4,6-dehydratase | low | > 67 |
Not shown: 31 genomes with orthologs for CSW01_01520 only; 3 genomes with orthologs for CSW01_01280 only