Conservation of cofitness between CA265_RS13060 and CA265_RS07870 in Pedobacter sp. GW460-11-11-14-LB5

79 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pedobacter sp. GW460-11-11-14-LB5 1.0 CA265_RS13060 hypothetical protein 1.0 CA265_RS07870 glycerol kinase 0.41 4
Mucilaginibacter yixingensis YX-36 DSM 26809 0.70 ABZR88_RS20860 pirin family protein 0.42 ABZR88_RS15235 glycerol kinase GlpK low > 71
Pontibacter actiniarum KMM 6156, DSM 19842 0.64 CA264_02030 hypothetical protein 0.72 CA264_11350 glycerol kinase low > 74
Parabacteroides merdae CL09T00C40 0.54 HMPREF1078_RS14290 pirin family protein 0.65 HMPREF1078_RS00735 glycerol kinase GlpK low > 61
Phocaeicola vulgatus CL09T03C04 0.50 HMPREF1058_RS17110 pirin family protein 0.45 HMPREF1058_RS02700 glycerol kinase GlpK low > 67
Phocaeicola dorei CL03T12C01 0.49 ABI39_RS13035 pirin family protein 0.45 ABI39_RS01980 glycerol kinase GlpK low > 72
Klebsiella michiganensis M5al 0.47 BWI76_RS26250 quercetin 2,3-dioxygenase 0.64 BWI76_RS27515 glycerol kinase low > 92
Enterobacter sp. TBS_079 0.46 MPMX20_04320 Quercetin 2,3-dioxygenase 0.64 MPMX20_04543 Glycerol kinase low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.46 GFF569 Qercetin 2,3-dioxygenase 0.64 GFF2307 Glycerol kinase (EC 2.7.1.30) low > 78
Escherichia coli ECOR27 0.46 NOLOHH_08630 yhhW quercetin 2,3-dioxygenase 0.64 NOLOHH_05910 glpK glycerol kinase GlpK low > 75
Escherichia coli ECRC62 0.46 BNILDI_02875 yhhW quercetin 2,3-dioxygenase 0.64 BNILDI_05620 glpK glycerol kinase GlpK low > 75
Dickeya dianthicola ME23 0.46 DZA65_RS20995 pirin family protein 0.63 DZA65_RS21530 glycerol kinase GlpK low > 75
Escherichia coli BW25113 0.46 b3439 yhhW hypothetical protein (NCBI) 0.64 b3926 glpK glycerol kinase (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.46 OHPLBJKB_00263 Quercetin 2,3-dioxygenase 0.64 OHPLBJKB_04125 Glycerol kinase low > 73
Escherichia coli BL21 0.46 ECD_03290 quercetinase activity in vitro 0.64 ECD_03811 glycerol kinase low > 61
Enterobacter asburiae PDN3 0.46 EX28DRAFT_4275 Pirin-related protein 0.64 EX28DRAFT_4399 glycerol kinase low > 76
Dickeya dianthicola 67-19 0.46 HGI48_RS19950 pirin family protein 0.63 HGI48_RS20485 glycerol kinase GlpK low > 71
Escherichia coli ECOR38 0.46 HEPCGN_15655 yhhW quercetin 2,3-dioxygenase 0.64 HEPCGN_12420 glpK glycerol kinase GlpK low > 87
Escherichia fergusonii Becca 0.45 EFB2_00381 Quercetin 2,3-dioxygenase 0.64 EFB2_04692 Glycerol kinase low > 86
Escherichia coli ECRC101 0.45 MCAODC_07360 yhhW quercetin 2,3-dioxygenase 0.64 MCAODC_04275 glpK glycerol kinase GlpK low > 87
Escherichia coli ECRC98 0.45 JDDGAC_20460 yhhW quercetin 2,3-dioxygenase 0.64 JDDGAC_17400 glpK glycerol kinase GlpK low > 86
Escherichia coli Nissle 1917 0.45 ECOLIN_RS19680 quercetin 2,3-dioxygenase 0.64 ECOLIN_RS22610 glycerol kinase GlpK low > 55
Escherichia coli ECRC102 0.45 NIAGMN_14600 yhhW quercetin 2,3-dioxygenase 0.64 NIAGMN_11530 glpK glycerol kinase GlpK — —
Dickeya dadantii 3937 0.45 DDA3937_RS19795 pirin family protein 0.63 DDA3937_RS00890 glycerol kinase GlpK low > 74
Escherichia coli ECRC100 0.45 OKFHMN_16830 yhhW quercetin 2,3-dioxygenase 0.64 OKFHMN_13775 glpK glycerol kinase GlpK low > 80
Escherichia coli ECRC99 0.45 KEDOAH_11310 yhhW quercetin 2,3-dioxygenase 0.64 KEDOAH_14385 glpK glycerol kinase GlpK — —
Pectobacterium carotovorum WPP14 0.45 HER17_RS01445 pirin family protein 0.63 HER17_RS00825 glycerol kinase GlpK low > 75
Paraburkholderia graminis OAS925 0.45 ABIE53_001352 redox-sensitive bicupin YhaK (pirin superfamily) 0.70 ABIE53_003469 glycerol kinase low > 113
Rahnella sp. WP5 0.44 EX31_RS05090 pirin family protein 0.64 EX31_RS14270 glycerol kinase GlpK low > 89
Burkholderia phytofirmans PsJN 0.44 BPHYT_RS05510 quercetin 2,3-dioxygenase 0.70 BPHYT_RS16495 glycerol kinase low > 109
Pantoea sp. MT58 0.44 IAI47_01645 pirin family protein 0.64 IAI47_00825 glycerol kinase GlpK low > 76
Paraburkholderia sabiae LMG 24235 0.43 QEN71_RS24860 pirin family protein 0.70 QEN71_RS02230 glycerol kinase GlpK low > 153
Paraburkholderia bryophila 376MFSha3.1 0.43 H281DRAFT_00225 hypothetical protein 0.70 H281DRAFT_04229 glycerol kinase low > 103
Serratia liquefaciens MT49 0.43 IAI46_23970 pirin family protein 0.63 IAI46_24600 glycerol kinase GlpK low > 86
Erwinia tracheiphila SCR3 0.43 LU632_RS19155 pirin family protein 0.63 LU632_RS19705 glpK glycerol kinase GlpK low > 74
Dyella japonica UNC79MFTsu3.2 0.42 ABZR86_RS14555 pirin family protein 0.61 ABZR86_RS20035 glycerol kinase GlpK low > 74
Ralstonia sp. UNC404CL21Col 0.42 ABZR87_RS15525 pirin family protein 0.58 ABZR87_RS03055 glycerol kinase GlpK low > 80
Herbaspirillum seropedicae SmR1 0.41 HSERO_RS17840 quercetin 2,3-dioxygenase 0.59 HSERO_RS04875 glycerol kinase low > 78
Xanthomonas campestris pv. campestris strain 8004 0.40 Xcc-8004.3098.1 Pirin 0.61 Xcc-8004.469.1 Glycerol kinase (EC 2.7.1.30) low > 74
Pseudomonas simiae WCS417 0.40 PS417_16130 quercetin 2,3-dioxygenase 0.60 PS417_05575 Glycerol kinase (EC 2.7.1.30) (from data) low > 88
Ralstonia solanacearum UW163 0.40 UW163_RS10035 pirin family protein 0.59 UW163_RS06225 glycerol kinase — —
Ralstonia solanacearum IBSBF1503 0.40 RALBFv3_RS03635 pirin family protein 0.59 RALBFv3_RS07395 glycerol kinase low > 76
Ralstonia solanacearum PSI07 0.39 RPSI07_RS13595 pirin family protein 0.58 RPSI07_RS09850 glycerol kinase low > 81
Pseudomonas fluorescens FW300-N2E3 0.39 AO353_22230 quercetin 2,3-dioxygenase 0.61 AO353_04180 glycerol kinase low > 101
Pseudomonas fluorescens SBW25-INTG 0.39 PFLU_RS18100 pirin family protein 0.60 PFLU_RS05660 glycerol kinase GlpK low > 109
Cupriavidus basilensis FW507-4G11 0.39 RR42_RS14795 quercetin 2,3-dioxygenase 0.61 RR42_RS13810 glycerol kinase low > 128
Ralstonia solanacearum GMI1000 0.39 RS_RS11080 pirin family protein 0.59 RS_RS15335 glycerol kinase low > 80
Pseudomonas fluorescens SBW25 0.39 PFLU_RS18100 pirin family protein 0.60 PFLU_RS05660 glycerol kinase GlpK low > 109
Pseudomonas syringae pv. syringae B728a 0.39 Psyr_3608 Pirin, N-terminal 0.60 Psyr_3905 glycerol kinase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.39 Psyr_3608 Pirin, N-terminal 0.60 Psyr_3905 glycerol kinase low > 86
Acidovorax sp. GW101-3H11 0.39 Ac3H11_4159 Pirin 0.60 Ac3H11_789 Glycerol kinase (EC 2.7.1.30) low > 79
Variovorax sp. OAS795 0.38 ABID97_RS18010 pirin family protein 0.60 ABID97_RS19965 glycerol kinase GlpK low > 91
Variovorax sp. SCN45 0.38 GFF589 Pirin 0.62 GFF2679 Glycerol kinase (EC 2.7.1.30) low > 127
Pseudomonas fluorescens FW300-N1B4 0.38 Pf1N1B4_5921 Pirin 0.60 Pf1N1B4_767 Glycerol kinase (EC 2.7.1.30) low > 87
Pseudomonas sp. RS175 0.38 PFR28_02653 Quercetin 2,3-dioxygenase 0.59 PFR28_03368 Glycerol kinase low > 88
Pseudomonas fluorescens GW456-L13 0.38 PfGW456L13_3871 Pirin 0.60 PfGW456L13_1734 Glycerol kinase (EC 2.7.1.30) low > 87
Pseudomonas fluorescens FW300-N2C3 0.38 AO356_21940 quercetin 2,3-dioxygenase 0.60 AO356_18250 glycerol kinase low > 104
Pseudomonas fluorescens FW300-N2E2 0.38 Pf6N2E2_249 Pirin 0.60 Pf6N2E2_5574 Glycerol kinase (EC 2.7.1.30) low > 103
Azospirillum brasilense Sp245 0.37 AZOBR_RS19815 quercetin 2 3-dioxygenase 0.52 AZOBR_RS25905 glycerol kinase 0.39 32
Hydrogenophaga sp. GW460-11-11-14-LB1 0.36 GFF5180 Pirin 0.59 GFF2807 Glycerol kinase (EC 2.7.1.30) low > 90
Kangiella aquimarina DSM 16071 0.34 B158DRAFT_1252 Pirin-related protein 0.15 B158DRAFT_0456 Sugar (pentulose and hexulose) kinases 0.38 21
Pseudomonas putida KT2440 0.34 PP_2564 putative Quercetin 2,3-dioxygenase 0.61 PP_1075 glycerol kinase low > 96
Alteromonas macleodii MIT1002 0.34 MIT1002_02155 Quercetin 2,3-dioxygenase 0.54 MIT1002_00198 Glycerol kinase low > 70
Azospirillum sp. SherDot2 0.34 MPMX19_03161 Quercetin 2,3-dioxygenase 0.52 MPMX19_05974 Glycerol kinase low > 112
Castellaniella sp019104865 MT123 0.34 ABCV34_RS15525 pirin family protein 0.58 ABCV34_RS05865 glycerol kinase GlpK low > 48
Acinetobacter radioresistens SK82 0.33 MPMX26_02373 Quercetin 2,3-dioxygenase 0.57 MPMX26_02393 Glycerol kinase low > 36
Brevundimonas sp. GW460-12-10-14-LB2 0.33 A4249_RS06705 pirin family protein 0.45 A4249_RS13260 glycerol kinase GlpK low > 48
Pseudomonas sp. S08-1 0.33 OH686_19590 Pirin 0.56 OH686_20375 glycerol kinase low > 80
Sphingomonas koreensis DSMZ 15582 0.33 Ga0059261_3701 Pirin-related protein 0.43 Ga0059261_0833 Glycerol kinase low > 68
Shewanella amazonensis SB2B 0.32 Sama_1390 hypothetical protein (RefSeq) 0.62 Sama_0341 glycerol kinase (RefSeq) low > 62
Shewanella sp. ANA-3 0.32 Shewana3_1221 pirin domain-containing protein (RefSeq) 0.62 Shewana3_3756 glycerol kinase (RefSeq) low > 73
Caulobacter crescentus NA1000 Δfur 0.31 CCNA_01539 pirin family protein 0.43 CCNA_01281 glycerol kinase low > 67
Caulobacter crescentus NA1000 0.31 CCNA_01539 pirin family protein 0.43 CCNA_01281 glycerol kinase low > 66
Rhodopseudomonas palustris CGA009 0.31 TX73_004695 pirin family protein 0.50 TX73_019190 glycerol kinase GlpK low > 86
Rhodanobacter denitrificans FW104-10B01 0.31 LRK54_RS18120 pirin family protein 0.60 LRK54_RS06535 glycerol kinase GlpK low > 59
Rhodanobacter sp. FW510-T8 0.31 OKGIIK_07180 Putative quercetin 2,3-dioxygenase PA1210 0.56 OKGIIK_00030 glpK glycerol kinase GlpK low > 52
Rhodanobacter denitrificans MT42 0.30 LRK55_RS17975 pirin family protein 0.60 LRK55_RS06280 glycerol kinase GlpK low > 63
Pseudomonas stutzeri RCH2 0.30 Psest_1579 Pirin-related protein 0.61 Psest_2773 glycerol kinase low > 67
Rhodospirillum rubrum S1H 0.27 Rru_A0375 Pirin-like (NCBI) 0.49 Rru_A2009 Glycerol kinase (NCBI) low > 58
Mycobacterium tuberculosis H37Rv 0.26 Rv0181c Conserved hypothetical protein 0.50 Rv3696c Probable glycerol kinase GlpK (ATP:glycerol 3-phosphotransferase) (glycerokinase) (GK) — —

Not shown: 7 genomes with orthologs for CA265_RS13060 only; 14 genomes with orthologs for CA265_RS07870 only