| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Klebsiella michiganensis M5al | 1.0 | BWI76_RS00865 | | DNA-binding transcriptional regulator OxyR | 1.0 | BWI76_RS07945 | | alkyl hydroperoxide reductase subunit F | 0.26 | 17 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.98 | GFF2347 | | Hydrogen peroxide-inducible genes activator | 0.93 | GFF4514 | | Alkyl hydroperoxide reductase protein F (EC 1.6.4.-) | low | > 78 |
| Enterobacter asburiae PDN3 | 0.96 | EX28DRAFT_4424 | | Transcriptional regulator | 0.94 | EX28DRAFT_2349 | | alkyl hydroperoxide reductase subunit F | — | — |
| Enterobacter sp. TBS_079 | 0.96 | MPMX20_04519 | | Hydrogen peroxide-inducible genes activator | 0.94 | MPMX20_01272 | | Alkyl hydroperoxide reductase subunit F | 0.29 | 64 |
| Escherichia coli ECOR38 | 0.96 | HEPCGN_12210 | oxyR | DNA-binding transcriptional regulator OxyR | 0.93 | HEPCGN_00775 | | Alkyl hydroperoxide reductase subunit F | low | > 87 |
| Escherichia coli ECRC100 | 0.96 | OKFHMN_13565 | oxyR | DNA-binding transcriptional regulator OxyR | 0.93 | OKFHMN_07505 | | Alkyl hydroperoxide reductase subunit F | low | > 80 |
| Escherichia coli ECRC102 | 0.96 | NIAGMN_11315 | oxyR | DNA-binding transcriptional regulator OxyR | 0.93 | NIAGMN_05560 | | Alkyl hydroperoxide reductase subunit F | — | — |
| Escherichia coli ECOR27 | 0.96 | NOLOHH_05700 | oxyR | DNA-binding transcriptional regulator OxyR | 0.94 | NOLOHH_23880 | | Alkyl hydroperoxide reductase subunit F | low | > 75 |
| Escherichia fergusonii Becca | 0.96 | EFB2_04651 | | Hydrogen peroxide-inducible genes activator | 0.93 | EFB2_03485 | | Alkyl hydroperoxide reductase subunit F | low | > 86 |
| Escherichia coli ECRC101 | 0.96 | MCAODC_04065 | oxyR | DNA-binding transcriptional regulator OxyR | 0.93 | MCAODC_26720 | | Alkyl hydroperoxide reductase subunit F | low | > 87 |
| Escherichia coli ECRC62 | 0.96 | BNILDI_05825 | oxyR | DNA-binding transcriptional regulator OxyR | 0.93 | BNILDI_21890 | | Alkyl hydroperoxide reductase subunit F | low | > 75 |
| Escherichia coli Nissle 1917 | 0.96 | ECOLIN_RS22870 | | DNA-binding transcriptional regulator OxyR | 0.93 | ECOLIN_RS03325 | | alkyl hydroperoxide reductase subunit F | low | > 55 |
| Escherichia coli ECRC99 | 0.96 | KEDOAH_14595 | oxyR | DNA-binding transcriptional regulator OxyR | 0.93 | KEDOAH_20465 | | Alkyl hydroperoxide reductase subunit F | — | — |
| Escherichia coli BL21 | 0.96 | ECD_03846 | | oxidative and nitrosative stress transcriptional regulator | 0.93 | ECD_00575 | | alkyl hydroperoxide reductase, F52a subunit, FAD/NAD(P)-binding | 0.86 | 1 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.96 | OHPLBJKB_04089 | | Hydrogen peroxide-inducible genes activator | 0.93 | OHPLBJKB_03099 | | Alkyl hydroperoxide reductase subunit F | low | > 73 |
| Escherichia coli BW25113 | 0.96 | b3961 | oxyR | DNA-binding transcriptional dual regulator (NCBI) | 0.93 | b0606 | ahpF | alkyl hydroperoxide reductase, F52a subunit; detoxification of hydroperoxides (VIMSS) | 0.32 | 46 |
| Escherichia coli ECRC98 | 0.96 | JDDGAC_17190 | oxyR | DNA-binding transcriptional regulator OxyR | 0.93 | JDDGAC_11150 | | Alkyl hydroperoxide reductase subunit F | low | > 86 |
| Pectobacterium carotovorum WPP14 | 0.90 | HER17_RS00955 | | DNA-binding transcriptional regulator OxyR | 0.77 | HER17_RS02550 | | alkyl hydroperoxide reductase subunit F | low | > 75 |
| Dickeya dianthicola 67-19 | 0.89 | HGI48_RS20405 | | DNA-binding transcriptional regulator OxyR | 0.79 | HGI48_RS02465 | | alkyl hydroperoxide reductase subunit F | low | > 71 |
| Dickeya dianthicola ME23 | 0.89 | DZA65_RS21450 | | DNA-binding transcriptional regulator OxyR | 0.79 | DZA65_RS02570 | | alkyl hydroperoxide reductase subunit F | low | > 75 |
| Dickeya dadantii 3937 | 0.89 | DDA3937_RS00970 | | DNA-binding transcriptional regulator OxyR | 0.79 | DDA3937_RS02520 | | alkyl hydroperoxide reductase subunit F | low | > 74 |
| Pantoea sp. MT58 | 0.88 | IAI47_00930 | | DNA-binding transcriptional regulator OxyR | 0.84 | IAI47_06795 | | alkyl hydroperoxide reductase subunit F | low | > 76 |
| Rhodanobacter denitrificans MT42 | 0.42 | LRK55_RS04545 | | LysR substrate-binding domain-containing protein | 0.63 | LRK55_RS00485 | | alkyl hydroperoxide reductase subunit F | 0.68 | 40 |
| Rhodanobacter denitrificans FW104-10B01 | 0.42 | LRK54_RS04765 | | LysR substrate-binding domain-containing protein | 0.63 | LRK54_RS00710 | | alkyl hydroperoxide reductase subunit F | low | > 59 |
| Rhodanobacter sp. FW510-T8 | 0.42 | OKGIIK_01995 | lysR | DNA-binding transcriptional regulator OxyR | 0.64 | OKGIIK_06550 | ahpF | alkyl hydroperoxide reductase subunit F | low | > 52 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.42 | Xcc-8004.4224.1 | | Hydrogen peroxide-inducible genes activator | 0.62 | Xcc-8004.4222.1 | | Alkyl hydroperoxide reductase protein F (EC 1.6.4.-) | 0.39 | 24 |
| Dyella japonica UNC79MFTsu3.2 | 0.41 | ABZR86_RS19355 | | DNA-binding transcriptional regulator OxyR | 0.64 | ABZR86_RS08495 | | alkyl hydroperoxide reductase subunit F | low | > 74 |
| Lysobacter sp. OAE881 | 0.39 | ABIE51_RS05475 | | LysR substrate-binding domain-containing protein | 0.64 | ABIE51_RS05480 | | alkyl hydroperoxide reductase subunit F | low | > 62 |
| Rhodospirillum rubrum S1H | 0.37 | Rru_A0334 | | Transcriptional Regulator, LysR family (NCBI) | 0.64 | Rru_A1417 | | thioredoxin-disulfide reductase (NCBI) | 0.87 | 1 |
| Pseudomonas syringae pv. syringae B728a | 0.36 | Psyr_0202 | | transcriptional regulator, LysR family | 0.63 | Psyr_2974 | | FAD-dependent pyridine nucleotide-disulfide oxidoreductase | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.36 | Psyr_0202 | | transcriptional regulator, LysR family | 0.63 | Psyr_2974 | | FAD-dependent pyridine nucleotide-disulfide oxidoreductase | low | > 86 |
| Pseudomonas putida KT2440 | 0.36 | PP_5309 | | oxidative and nitrosative stress transcriptional dual regulator | 0.65 | PP_2440 | | Alkyl hydroperoxide reductase subunit F | low | > 96 |
| Pseudomonas stutzeri RCH2 | 0.36 | Psest_4191 | | Transcriptional regulator | 0.64 | Psest_1134 | | alkyl hydroperoxide reductase, F subunit | low | > 67 |
| Herbaspirillum seropedicae SmR1 | 0.36 | HSERO_RS18935 | | LysR family transcriptional regulator | 0.60 | HSERO_RS21535 | | NADH dehydrogenase | low | > 78 |
| Castellaniella sp019104865 MT123 | 0.36 | ABCV34_RS03575 | | LysR substrate-binding domain-containing protein | 0.60 | ABCV34_RS09915 | | alkyl hydroperoxide reductase subunit F | low | > 48 |
| Pseudomonas fluorescens FW300-N2E2 | 0.36 | Pf6N2E2_4353 | | Hydrogen peroxide-inducible genes activator | 0.65 | Pf6N2E2_448 | | Alkyl hydroperoxide reductase protein F (EC 1.6.4.-) | low | > 103 |
| Azospirillum brasilense Sp245 | 0.35 | AZOBR_RS31340 | | LysR family transcriptional regulator | 0.63 | AZOBR_RS20515 | | alkyl hydroperoxide reductase subunit F | 0.27 | 31 |
| Azospirillum sp. SherDot2 | 0.35 | MPMX19_04930 | | Hydrogen peroxide-inducible genes activator | 0.63 | MPMX19_05836 | | Alkyl hydroperoxide reductase subunit F | low | > 112 |
| Pseudomonas sp. S08-1 | 0.35 | OH686_13510 | | Hydrogen peroxide-inducible genes activator | 0.63 | OH686_18675 | | alkyl hydroperoxide reductase subunit F | low | > 80 |
| Pseudomonas simiae WCS417 | 0.35 | PS417_27865 | | LysR family transcriptional regulator | 0.66 | PS417_14040 | | alkyl hydroperoxide reductase | 0.56 | 2 |
| Kangiella aquimarina DSM 16071 | 0.35 | B158DRAFT_0567 | | Transcriptional regulator | 0.45 | B158DRAFT_0279 | | alkyl hydroperoxide reductase, F subunit | low | > 40 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.35 | H281DRAFT_04673 | | transcriptional regulator, LysR family | 0.63 | H281DRAFT_02889 | | alkyl hydroperoxide reductase subunit F | — | — |
| Ralstonia sp. UNC404CL21Col | 0.35 | ABZR87_RS01255 | | LysR substrate-binding domain-containing protein | 0.63 | ABZR87_RS17240 | | alkyl hydroperoxide reductase subunit F | 0.64 | 6 |
| Dechlorosoma suillum PS | 0.34 | Dsui_0823 | | transcriptional regulator | 0.65 | Dsui_1902 | | alkyl hydroperoxide reductase, F subunit | low | > 51 |
| Pseudomonas fluorescens FW300-N2C3 | 0.34 | AO356_12385 | | LysR family transcriptional regulator | 0.65 | AO356_22810 | | alkyl hydroperoxide reductase subunit F | low | > 104 |
| Pseudomonas fluorescens SBW25 | 0.34 | PFLU_RS29545 | | hydrogen peroxide-inducible genes activator | 0.64 | PFLU_RS14575 | | alkyl hydroperoxide reductase subunit F | low | > 109 |
| Ralstonia solanacearum IBSBF1503 | 0.34 | RALBFv3_RS05605 | | hydrogen peroxide-inducible genes activator | 0.63 | RALBFv3_RS22265 | | alkyl hydroperoxide reductase subunit F | low | > 76 |
| Ralstonia solanacearum UW163 | 0.34 | UW163_RS08020 | | hydrogen peroxide-inducible genes activator | 0.63 | UW163_RS22810 | | alkyl hydroperoxide reductase subunit F | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.34 | PFLU_RS29545 | | hydrogen peroxide-inducible genes activator | 0.64 | PFLU_RS14575 | | alkyl hydroperoxide reductase subunit F | low | > 109 |
| Pseudomonas sp. RS175 | 0.34 | PFR28_04434 | | Hydrogen peroxide-inducible genes activator | 0.65 | PFR28_02481 | | Alkyl hydroperoxide reductase subunit F | low | > 88 |
| Ralstonia solanacearum GMI1000 | 0.34 | RS_RS13470 | | hydrogen peroxide-inducible genes activator | 0.63 | RS_RS18340 | | alkyl hydroperoxide reductase subunit F | 0.75 | 23 |
| Pseudomonas fluorescens GW456-L13 | 0.34 | PfGW456L13_773 | | Hydrogen peroxide-inducible genes activator | 0.65 | PfGW456L13_2928 | | Alkyl hydroperoxide reductase protein F (EC 1.6.4.-) | low | > 87 |
| Burkholderia phytofirmans PsJN | 0.34 | BPHYT_RS03470 | | LysR family transcriptional regulator | 0.63 | BPHYT_RS26840 | | NADH dehydrogenase | low | > 109 |
| Paraburkholderia sabiae LMG 24235 | 0.34 | QEN71_RS26625 | | LysR substrate-binding domain-containing protein | 0.64 | QEN71_RS13375 | | alkyl hydroperoxide reductase subunit F | low | > 153 |
| Ralstonia solanacearum PSI07 | 0.34 | RPSI07_RS11690 | | hydrogen peroxide-inducible genes activator | 0.63 | RPSI07_RS00935 | | alkyl hydroperoxide reductase subunit F | 0.57 | 7 |
| Paraburkholderia graminis OAS925 | 0.34 | ABIE53_000834 | | LysR family hydrogen peroxide-inducible transcriptional activator | 0.63 | ABIE53_005905 | | alkyl hydroperoxide reductase subunit F | low | > 113 |
| Pseudomonas fluorescens FW300-N1B4 | 0.34 | Pf1N1B4_2106 | | Hydrogen peroxide-inducible genes activator | 0.64 | Pf1N1B4_5010 | | Alkyl hydroperoxide reductase protein F (EC 1.6.4.-) | 0.47 | 9 |
| Pseudomonas fluorescens FW300-N2E3 | 0.34 | AO353_09315 | | LysR family transcriptional regulator | 0.65 | AO353_26960 | | alkyl hydroperoxide reductase subunit F | 0.40 | 33 |
| Marinobacter adhaerens HP15 | 0.33 | HP15_308 | | oxidative stress regulatory protein OxyR | 0.63 | HP15_3619 | | FAD-dependent pyridine nucleotide-disulfide oxidoreductase | low | > 73 |
| Phocaeicola dorei CL03T12C01 | 0.32 | ABI39_RS06075 | | hydrogen peroxide-inducible genes activator | 0.41 | ABI39_RS03990 | | alkyl hydroperoxide reductase subunit F | 0.35 | 55 |
| Bacteroides thetaiotaomicron VPI-5482 | 0.32 | BT4716 | | redox-sensitive transcriptional activator (NCBI ptt file) | 0.43 | BT2811 | | alkyl hydroperoxide reductase subunit F (NCBI ptt file) | 0.38 | 1 |
| Acidovorax sp. GW101-3H11 | 0.32 | Ac3H11_784 | | Hydrogen peroxide-inducible genes activator | 0.62 | Ac3H11_232 | | Alkyl hydroperoxide reductase protein F (EC 1.6.4.-) | low | > 79 |
| Bacteroides ovatus ATCC 8483 | 0.31 | BACOVA_05567 | | LysR substrate binding domain protein | 0.44 | BACOVA_02067 | | alkyl hydroperoxide reductase, F subunit | low | > 94 |
| Caulobacter crescentus NA1000 Δfur | 0.31 | CCNA_03811 | | LysR-family transcriptional regulator | 0.60 | CCNA_03013 | | alkyl hydroperoxide reductase subunit F | — | — |
| Caulobacter crescentus NA1000 | 0.31 | CCNA_03811 | | LysR-family transcriptional regulator | 0.60 | CCNA_03013 | | alkyl hydroperoxide reductase subunit F | low | > 66 |
| Sphingomonas koreensis DSMZ 15582 | 0.30 | Ga0059261_0159 | | Transcriptional regulator | 0.59 | Ga0059261_0156 | | alkyl hydroperoxide reductase subunit F | 0.44 | 3 |
| Bacteroides stercoris CC31F | 0.30 | HMPREF1181_RS02160 | | hydrogen peroxide-inducible genes activator | 0.39 | HMPREF1181_RS02150 | | alkyl hydroperoxide reductase subunit F | low | > 56 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.30 | GFF2803 | | Hydrogen peroxide-inducible genes activator | 0.62 | GFF3915 | | Alkyl hydroperoxide reductase protein F (EC 1.6.4.-) | low | > 90 |
| Parabacteroides merdae CL09T00C40 | 0.29 | HMPREF1078_RS01140 | | hydrogen peroxide-inducible genes activator | 0.43 | HMPREF1078_RS04200 | | alkyl hydroperoxide reductase subunit F | low | > 61 |
| Acinetobacter radioresistens SK82 | 0.28 | MPMX26_02334 | | Hydrogen peroxide-inducible genes activator | 0.60 | MPMX26_02013 | | Alkyl hydroperoxide reductase subunit F | low | > 36 |
| Alteromonas macleodii MIT1002 | 0.27 | MIT1002_01120 | | Morphology and auto-aggregation control protein | 0.45 | MIT1002_01785 | | NADH dehydrogenase | low | > 70 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.26 | A4249_RS12755 | | hydrogen peroxide-inducible genes activator | 0.63 | A4249_RS04545 | | alkyl hydroperoxide reductase subunit F | low | > 48 |
| Shewanella oneidensis MR-1 | 0.26 | SO1328 | | transcriptional regulator, LysR family (NCBI ptt file) | 0.58 | SO0956 | ahpF | alkyl hydroperoxide reductase, F subunit (NCBI ptt file) | 0.36 | 76 |
| Shewanella sp. ANA-3 | 0.26 | Shewana3_3046 | | LysR family transcriptional regulator (RefSeq) | 0.58 | Shewana3_3326 | | FAD-dependent pyridine nucleotide-disulphide oxidoreductase (RefSeq) | low | > 73 |
| Shewanella loihica PV-4 | 0.25 | Shew_1035 | | LysR family transcriptional regulator (RefSeq) | 0.57 | Shew_0793 | | FAD-dependent pyridine nucleotide-disulphide oxidoreductase (RefSeq) | low | > 60 |
| Shewanella amazonensis SB2B | 0.24 | Sama_0860 | | LysR family transcriptional regulator (RefSeq) | 0.56 | Sama_0618 | | alkyl hydroperoxide reductase, F subunit (RefSeq) | low | > 62 |
Not shown: 17 genomes with orthologs for BWI76_RS00865 only; 2 genomes with orthologs for BWI76_RS07945 only