Conservation of cofitness between BPHYT_RS17885 and BPHYT_RS33835 in Burkholderia phytofirmans PsJN

78 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS17885 3-dehydroquinate synthase 1.0 BPHYT_RS33835 O-succinylhomoserine sulfhydrylase 0.89 15
Paraburkholderia graminis OAS925 0.96 ABIE53_003740 3-dehydroquinate synthase 0.93 ABIE53_004817 O-succinylhomoserine sulfhydrylase — —
Paraburkholderia bryophila 376MFSha3.1 0.96 H281DRAFT_05615 3-dehydroquinate synthase 0.94 H281DRAFT_06059 O-succinylhomoserine sulfhydrylase — —
Paraburkholderia sabiae LMG 24235 0.89 QEN71_RS28035 3-dehydroquinate synthase 0.88 QEN71_RS17685 O-succinylhomoserine sulfhydrylase low > 153
Cupriavidus basilensis FW507-4G11 0.75 RR42_RS19005 3-dehydroquinate synthase 0.73 RR42_RS14320 O-succinylhomoserine sulfhydrylase 0.81 12
Variovorax sp. OAS795 0.63 ABID97_RS23255 3-dehydroquinate synthase 0.58 ABID97_RS21630 O-succinylhomoserine sulfhydrylase — —
Variovorax sp. SCN45 0.61 GFF5325 3-dehydroquinate synthase (EC 4.2.3.4) 0.56 GFF3088 O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) @ O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.60 GFF1331 3-dehydroquinate synthase (EC 4.2.3.4) 0.60 GFF301 O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) 0.75 14
Castellaniella sp019104865 MT123 0.58 ABCV34_RS12705 3-dehydroquinate synthase 0.34 ABCV34_RS15785 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme — —
Pseudomonas putida KT2440 0.58 PP_5078 3-dehydroquinate synthase 0.53 PP_2001 O-succinylhomoserine sulfhydrylase — —
Pseudomonas sp. S08-1 0.57 OH686_10015 3-dehydroquinate synthase 0.56 OH686_04415 O-succinylhomoserine sulfhydrylase — —
Pseudomonas fluorescens SBW25 0.57 PFLU_RS02030 3-dehydroquinate synthase 0.55 PFLU_RS20510 O-succinylhomoserine sulfhydrylase — —
Pseudomonas fluorescens SBW25-INTG 0.57 PFLU_RS02030 3-dehydroquinate synthase 0.55 PFLU_RS20510 O-succinylhomoserine sulfhydrylase — —
Pseudomonas simiae WCS417 0.57 PS417_01985 3-dehydroquinate synthase 0.55 PS417_18530 O-succinylhomoserine sulfhydrylase — —
Dechlorosoma suillum PS 0.57 Dsui_1095 3-dehydroquinate synthase 0.65 Dsui_3185 O-succinylhomoserine sulfhydrylase — —
Pseudomonas fluorescens GW456-L13 0.56 PfGW456L13_275 3-dehydroquinate synthase (EC 4.2.3.4) 0.55 PfGW456L13_3934 O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) 0.65 29
Pseudomonas fluorescens FW300-N2E2 0.56 Pf6N2E2_3754 3-dehydroquinate synthase (EC 4.2.3.4) 0.55 Pf6N2E2_77 O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) — —
Pseudomonas fluorescens FW300-N1B4 0.56 Pf1N1B4_1537 3-dehydroquinate synthase (EC 4.2.3.4) 0.33 Pf1N1B4_4890 Cystathionine gamma-lyase (EC 4.4.1.1) — —
Pseudomonas fluorescens FW300-N2C3 0.56 AO356_09385 3-dehydroquinate synthase 0.55 AO356_21470 O-succinylhomoserine sulfhydrylase — —
Marinobacter adhaerens HP15 0.55 HP15_480 3-dehydroquinate synthase 0.55 HP15_1820 methionine gamma-lyase — —
Shewanella amazonensis SB2B 0.55 Sama_3367 3-dehydroquinate synthase (RefSeq) 0.37 Sama_1242 methionine gamma-lyase (RefSeq) low > 62
Pseudomonas fluorescens FW300-N2E3 0.55 AO353_12505 3-dehydroquinate synthase 0.55 AO353_20695 O-succinylhomoserine sulfhydrylase — —
Acinetobacter radioresistens SK82 0.55 MPMX26_02810 3-dehydroquinate synthase 0.58 MPMX26_01645 O-succinylhomoserine sulfhydrylase — —
Pseudomonas sp. RS175 0.54 PFR28_05013 3-dehydroquinate synthase 0.55 PFR28_02810 O-succinylhomoserine sulfhydrylase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.54 Psyr_0409 3-dehydroquinate synthase 0.57 Psyr_1669 O-succinylhomoserine sulfhydrylase — —
Pseudomonas syringae pv. syringae B728a 0.54 Psyr_0409 3-dehydroquinate synthase 0.57 Psyr_1669 O-succinylhomoserine sulfhydrylase — —
Pseudomonas stutzeri RCH2 0.54 Psest_3713 3-dehydroquinate synthase 0.54 Psest_2578 O-succinylhomoserine sulfhydrylase — —
Shewanella oneidensis MR-1 0.53 SO0287 aroB 3-dehydroquinate synthase (NCBI ptt file) 0.40 SO1812 mdeA Methionine gamma-lyase (EC 4.4.1.11) (from data) low > 76
Shewanella sp. ANA-3 0.52 Shewana3_3893 aroB 3-dehydroquinate synthase (RefSeq) 0.40 Shewana3_2643 methionine gamma-lyase (RefSeq) low > 73
Shewanella loihica PV-4 0.51 Shew_0214 3-dehydroquinate synthase (RefSeq) 0.35 Shew_2491 methionine gamma-lyase (RefSeq) low > 60
Escherichia coli ECOR27 0.51 NOLOHH_08905 aroB 3-dehydroquinate synthase 0.31 NOLOHH_05820 metB cystathionine gamma-synthase 0.89 40
Escherichia coli HS(pFamp)R (ATCC 700891) 0.51 OHPLBJKB_00314 3-dehydroquinate synthase 0.31 OHPLBJKB_04111 Cystathionine gamma-synthase low > 73
Escherichia coli ECRC62 0.51 BNILDI_02615 aroB 3-dehydroquinate synthase 0.31 BNILDI_05715 metB cystathionine gamma-synthase 0.89 53
Escherichia coli BL21 0.51 ECD_03241 3-dehydroquinate synthase 0.31 ECD_03825 cystathionine gamma-synthase, PLP-dependent low > 61
Escherichia coli ECRC99 0.50 KEDOAH_11025 aroB 3-dehydroquinate synthase 0.31 KEDOAH_14485 metB cystathionine gamma-synthase — —
Escherichia coli ECRC100 0.50 OKFHMN_17115 aroB 3-dehydroquinate synthase 0.31 OKFHMN_13675 metB cystathionine gamma-synthase 0.95 35
Escherichia coli Nissle 1917 0.50 ECOLIN_RS19360 3-dehydroquinate synthase 0.31 ECOLIN_RS22725 cystathionine gamma-synthase 0.84 16
Escherichia coli ECRC101 0.50 MCAODC_07645 aroB 3-dehydroquinate synthase 0.31 MCAODC_04175 metB cystathionine gamma-synthase 0.87 7
Escherichia coli ECRC102 0.50 NIAGMN_14885 aroB 3-dehydroquinate synthase 0.31 NIAGMN_11430 metB cystathionine gamma-synthase — —
Escherichia coli ECOR38 0.50 HEPCGN_15935 aroB 3-dehydroquinate synthase 0.31 HEPCGN_12345 metB cystathionine gamma-synthase 0.82 54
Pantoea sp. MT58 0.50 IAI47_01895 3-dehydroquinate synthase 0.28 IAI47_00880 cystathionine gamma-synthase — —
Escherichia fergusonii Becca 0.50 EFB2_00439 3-dehydroquinate synthase 0.31 EFB2_04679 Cystathionine gamma-synthase low > 86
Escherichia coli ECRC98 0.50 JDDGAC_20745 aroB 3-dehydroquinate synthase 0.31 JDDGAC_17300 metB cystathionine gamma-synthase 0.90 25
Vibrio cholerae E7946 ATCC 55056 0.50 CSW01_13300 3-dehydroquinate synthase 0.27 CSW01_13550 O-succinylhomoserine (thiol)-lyase low > 62
Escherichia coli BW25113 0.50 b3389 aroB 3-dehydroquinate synthase (NCBI) 0.31 b3939 metB cystathionine gamma-synthase (NCBI) 0.84 57
Klebsiella michiganensis M5al 0.49 BWI76_RS26085 3-dehydroquinate synthase 0.32 BWI76_RS24210 cystathionine gamma-lyase low > 92
Dickeya dadantii 3937 0.49 DDA3937_RS19545 3-dehydroquinate synthase 0.31 DDA3937_RS00950 cystathionine gamma-synthase — —
Enterobacter sp. TBS_079 0.49 MPMX20_04278 3-dehydroquinate synthase 0.31 MPMX20_01953 Cystathionine beta-lyase low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.48 GFF630 3-dehydroquinate synthase (EC 4.2.3.4) 0.31 GFF2323 Cystathionine gamma-synthase (EC 2.5.1.48) low > 78
Pectobacterium carotovorum WPP14 0.48 HER17_RS01780 3-dehydroquinate synthase 0.34 HER17_RS07405 PLP-dependent aspartate aminotransferase family protein low > 75
Dickeya dianthicola 67-19 0.48 HGI48_RS19675 3-dehydroquinate synthase 0.31 HGI48_RS20425 cystathionine gamma-synthase — —
Enterobacter asburiae PDN3 0.48 EX28DRAFT_4153 3-dehydroquinate synthase (EC 4.2.3.4) 0.31 EX28DRAFT_1678 Cystathionine beta-lyases/cystathionine gamma-synthases low > 76
Dickeya dianthicola ME23 0.48 DZA65_RS20760 3-dehydroquinate synthase 0.31 DZA65_RS21470 cystathionine gamma-synthase — —
Erwinia tracheiphila SCR3 0.48 LU632_RS22865 aroB 3-dehydroquinate synthase 0.30 LU632_RS19640 metB cystathionine gamma-synthase low > 74
Kangiella aquimarina DSM 16071 0.44 B158DRAFT_0764 3-dehydroquinate synthase (EC 4.2.3.4) 0.40 B158DRAFT_1522 methionine gamma-lyase low > 40
Rhodospirillum rubrum S1H 0.43 Rru_A3741 3-dehydroquinate synthase (NCBI) 0.48 Rru_A3214 O-succinylhomoserine sulfhydrylase (NCBI) — —
Lysobacter sp. OAE881 0.42 ABIE51_RS16100 3-dehydroquinate synthase 0.33 ABIE51_RS04295 cystathionine gamma-synthase — —
Rhodanobacter denitrificans FW104-10B01 0.41 LRK54_RS04310 3-dehydroquinate synthase 0.32 LRK54_RS05660 PLP-dependent aspartate aminotransferase family protein — —
Rhodanobacter sp. FW510-T8 0.41 OKGIIK_11185 aroB 3-dehydroquinate synthase 0.33 OKGIIK_01180 metC cystathionine beta-lyase — —
Rhodanobacter denitrificans MT42 0.41 LRK55_RS04085 3-dehydroquinate synthase 0.32 LRK55_RS05410 cystathionine gamma-synthase — —
Caulobacter crescentus NA1000 Δfur 0.40 CCNA_03104 3-dehydroquinate synthase 0.44 CCNA_02321 O-succinylhomoserine sulfhydrylase low > 67
Caulobacter crescentus NA1000 0.40 CCNA_03104 3-dehydroquinate synthase 0.44 CCNA_02321 O-succinylhomoserine sulfhydrylase 0.82 53
Magnetospirillum magneticum AMB-1 0.40 AMB_RS19865 3-dehydroquinate synthase 0.50 AMB_RS21365 O-succinylhomoserine sulfhydrylase — —
Azospirillum sp. SherDot2 0.39 MPMX19_02639 3-dehydroquinate synthase 0.46 MPMX19_01364 O-succinylhomoserine sulfhydrylase — —
Dyella japonica UNC79MFTsu3.2 0.39 ABZR86_RS10480 3-dehydroquinate synthase 0.34 ABZR86_RS18745 PLP-dependent aspartate aminotransferase family protein — —
Brevundimonas sp. GW460-12-10-14-LB2 0.38 A4249_RS04175 3-dehydroquinate synthase 0.34 A4249_RS08315 cystathionine gamma-synthase — —
Xanthomonas campestris pv. campestris strain 8004 0.38 Xcc-8004.1615.1 3-dehydroquinate synthase (EC 4.2.3.4) 0.33 Xcc-8004.4517.1 Cystathionine gamma-lyase (EC 4.4.1.1) low > 74
Azospirillum brasilense Sp245 0.38 AZOBR_RS03220 3-dehydroquinate synthase 0.46 AZOBR_RS02140 O-succinylhomoserine sulfhydrylase — —
Rhizobium sp. OAE497 0.38 ABIE40_RS17670 3-dehydroquinate synthase 0.45 ABIE40_RS02340 O-succinylhomoserine sulfhydrylase — —
Sinorhizobium meliloti 1021 0.38 SMc00696 3-dehydroquinate synthase 0.45 SMc02217 O-succinylhomoserine sulfhydrylase — —
Phaeobacter inhibens DSM 17395 0.37 PGA1_c14100 3-dehydroquinate synthase AroB 0.49 PGA1_c23540 O-succinylhomoserine sulfhydrylase MetZ — —
Rhodopseudomonas palustris CGA009 0.37 TX73_002610 3-dehydroquinate synthase 0.48 TX73_024775 O-succinylhomoserine sulfhydrylase — —
Agrobacterium fabrum C58 0.36 Atu3625 3-dehydroquinate synthase 0.45 Atu0432 O-succinylhomoserine sulfhydrylase — —
Dinoroseobacter shibae DFL-12 0.36 Dshi_1608 3-dehydroquinate synthase (RefSeq) 0.49 Dshi_2410 O-succinylhomoserine sulfhydrylase (RefSeq) — —
Sphingomonas koreensis DSMZ 15582 0.35 Ga0059261_3591 3-dehydroquinate synthase (EC 4.2.3.4) 0.48 Ga0059261_3194 O-acetylhomoserine sulfhydrylase (EC:2.5.1.49) (from data) — —
Mycobacterium tuberculosis H37Rv 0.30 Rv2538c 3-dehydroquinate synthase AroB 0.47 Rv0391 Probable O-succinylhomoserine sulfhydrylase MetZ (OSH sulfhydrylase) — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.27 ABZR88_RS05215 3-dehydroquinate synthase 0.31 ABZR88_RS06685 cystathionine gamma-synthase — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.24 CA264_13105 3-dehydroquinate synthase 0.45 CA264_02530 O-succinylhomoserine sulfhydrylase — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.23 Echvi_0121 3-dehydroquinate synthase 0.48 Echvi_2283 Cystathionine beta-lyases/cystathionine gamma-synthases — —

Not shown: 12 genomes with orthologs for BPHYT_RS17885 only; 3 genomes with orthologs for BPHYT_RS33835 only