Conservation of cofitness between BPHYT_RS15915 and BPHYT_RS17885 in Burkholderia phytofirmans PsJN

62 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS15915 ornithine carbamoyltransferase 1.0 BPHYT_RS17885 3-dehydroquinate synthase 0.89 19
Paraburkholderia bryophila 376MFSha3.1 0.97 H281DRAFT_04119 ornithine carbamoyltransferase 0.96 H281DRAFT_05615 3-dehydroquinate synthase — —
Paraburkholderia graminis OAS925 0.97 ABIE53_003354 ornithine carbamoyltransferase 0.96 ABIE53_003740 3-dehydroquinate synthase — —
Paraburkholderia sabiae LMG 24235 0.96 QEN71_RS02785 ornithine carbamoyltransferase 0.89 QEN71_RS28035 3-dehydroquinate synthase 0.75 60
Ralstonia solanacearum PSI07 0.80 RPSI07_RS12115 ornithine carbamoyltransferase 0.71 RPSI07_RS10300 3-dehydroquinate synthase — —
Ralstonia solanacearum GMI1000 0.79 RS_RS12805 ornithine carbamoyltransferase 0.71 RS_RS14880 3-dehydroquinate synthase — —
Ralstonia solanacearum UW163 0.79 UW163_RS08440 ornithine carbamoyltransferase 0.72 UW163_RS06680 3-dehydroquinate synthase — —
Ralstonia solanacearum IBSBF1503 0.79 RALBFv3_RS05185 ornithine carbamoyltransferase 0.72 RALBFv3_RS06935 3-dehydroquinate synthase — —
Ralstonia sp. UNC404CL21Col 0.79 ABZR87_RS00840 ornithine carbamoyltransferase 0.71 ABZR87_RS02590 3-dehydroquinate synthase — —
Cupriavidus basilensis FW507-4G11 0.77 RR42_RS17175 ornithine carbamoyltransferase 0.75 RR42_RS19005 3-dehydroquinate synthase — —
Variovorax sp. OAS795 0.73 ABID97_RS08630 ornithine carbamoyltransferase 0.63 ABID97_RS23255 3-dehydroquinate synthase — —
Variovorax sp. SCN45 0.71 GFF3926 Ornithine carbamoyltransferase (EC 2.1.3.3) 0.61 GFF5325 3-dehydroquinate synthase (EC 4.2.3.4) — —
Acidovorax sp. GW101-3H11 0.71 Ac3H11_1333 Ornithine carbamoyltransferase (EC 2.1.3.3) 0.56 Ac3H11_4705 3-dehydroquinate synthase (EC 4.2.3.4) — —
Dechlorosoma suillum PS 0.71 Dsui_3249 ornithine carbamoyltransferase 0.57 Dsui_1095 3-dehydroquinate synthase — —
Castellaniella sp019104865 MT123 0.71 ABCV34_RS05380 ornithine carbamoyltransferase 0.58 ABCV34_RS12705 3-dehydroquinate synthase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.68 GFF3419 Ornithine carbamoyltransferase (EC 2.1.3.3) 0.60 GFF1331 3-dehydroquinate synthase (EC 4.2.3.4) — —
Acinetobacter radioresistens SK82 0.56 MPMX26_01287 Ornithine carbamoyltransferase 1, anabolic 0.55 MPMX26_02810 3-dehydroquinate synthase — —
Marinobacter adhaerens HP15 0.52 HP15_750 ornithine carbamoyltransferase 0.55 HP15_480 3-dehydroquinate synthase — —
Pseudomonas simiae WCS417 0.51 PS417_05595 ornithine carbamoyltransferase 0.57 PS417_01985 3-dehydroquinate synthase — —
Pseudomonas fluorescens FW300-N2E3 0.51 AO353_04155 ornithine carbamoyltransferase 0.55 AO353_12505 3-dehydroquinate synthase — —
Pseudomonas fluorescens SBW25-INTG 0.51 PFLU_RS05680 ornithine carbamoyltransferase 0.57 PFLU_RS02030 3-dehydroquinate synthase — —
Pseudomonas fluorescens SBW25 0.51 PFLU_RS05680 ornithine carbamoyltransferase 0.57 PFLU_RS02030 3-dehydroquinate synthase — —
Pseudomonas fluorescens FW300-N1B4 0.51 Pf1N1B4_762 Ornithine carbamoyltransferase (EC 2.1.3.3) 0.56 Pf1N1B4_1537 3-dehydroquinate synthase (EC 4.2.3.4) — —
Pseudomonas sp. RS175 0.50 PFR28_03363 Ornithine carbamoyltransferase 1, anabolic 0.54 PFR28_05013 3-dehydroquinate synthase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.50 Psyr_3901 ornithine carbamoyltransferase 0.54 Psyr_0409 3-dehydroquinate synthase — —
Pseudomonas syringae pv. syringae B728a 0.50 Psyr_3901 ornithine carbamoyltransferase 0.54 Psyr_0409 3-dehydroquinate synthase — —
Pseudomonas fluorescens FW300-N2E2 0.50 Pf6N2E2_5579 Ornithine carbamoyltransferase (EC 2.1.3.3) 0.56 Pf6N2E2_3754 3-dehydroquinate synthase (EC 4.2.3.4) — —
Pseudomonas stutzeri RCH2 0.50 Psest_1291 ornithine carbamoyltransferase 0.54 Psest_3713 3-dehydroquinate synthase — —
Pseudomonas fluorescens FW300-N2C3 0.50 AO356_18275 ornithine carbamoyltransferase 0.56 AO356_09385 3-dehydroquinate synthase — —
Pseudomonas fluorescens GW456-L13 0.50 PfGW456L13_1739 Ornithine carbamoyltransferase (EC 2.1.3.3) 0.56 PfGW456L13_275 3-dehydroquinate synthase (EC 4.2.3.4) 0.69 65
Pseudomonas putida KT2440 0.49 PP_1079 Ornithine carbamoyltransferase 0.58 PP_5078 3-dehydroquinate synthase — —
Pseudomonas sp. S08-1 0.49 OH686_20405 ornithine carbamoyltransferase 0.57 OH686_10015 3-dehydroquinate synthase — —
Rhodopseudomonas palustris CGA009 0.46 TX73_024805 ornithine carbamoyltransferase 0.37 TX73_002610 3-dehydroquinate synthase — —
Brevundimonas sp. GW460-12-10-14-LB2 0.46 A4249_RS11920 ornithine carbamoyltransferase 0.38 A4249_RS04175 3-dehydroquinate synthase — —
Rhodospirillum rubrum S1H 0.45 Rru_A3276 Ornithine carbamoyltransferase (NCBI) 0.43 Rru_A3741 3-dehydroquinate synthase (NCBI) — —
Agrobacterium fabrum C58 0.43 Atu0429 ornithine carbamoyltransferase 0.36 Atu3625 3-dehydroquinate synthase — —
Magnetospirillum magneticum AMB-1 0.43 AMB_RS01610 ornithine carbamoyltransferase 0.40 AMB_RS19865 3-dehydroquinate synthase — —
Sinorhizobium meliloti 1021 0.43 SMc02137 ornithine carbamoyltransferase 0.38 SMc00696 3-dehydroquinate synthase — —
Dinoroseobacter shibae DFL-12 0.43 Dshi_0796 ornithine carbamoyltransferase (RefSeq) 0.36 Dshi_1608 3-dehydroquinate synthase (RefSeq) — —
Azospirillum brasilense Sp245 0.43 AZOBR_RS19030 ornithine carbamoyltransferase 0.38 AZOBR_RS03220 3-dehydroquinate synthase — —
Caulobacter crescentus NA1000 Δfur 0.43 CCNA_02325 ornithine carbamoyltransferase 0.40 CCNA_03104 3-dehydroquinate synthase low > 67
Caulobacter crescentus NA1000 0.43 CCNA_02325 ornithine carbamoyltransferase 0.40 CCNA_03104 3-dehydroquinate synthase — —
Rhizobium sp. OAE497 0.42 ABIE40_RS02325 ornithine carbamoyltransferase 0.38 ABIE40_RS17670 3-dehydroquinate synthase — —
Azospirillum sp. SherDot2 0.42 MPMX19_02178 Ornithine carbamoyltransferase, anabolic 0.39 MPMX19_02639 3-dehydroquinate synthase — —
Phaeobacter inhibens DSM 17395 0.42 PGA1_c24220 ornithine carbamoyltransferase ArgF 0.37 PGA1_c14100 3-dehydroquinate synthase AroB — —
Sphingomonas koreensis DSMZ 15582 0.39 Ga0059261_3206 ornithine carbamoyltransferase 0.35 Ga0059261_3591 3-dehydroquinate synthase (EC 4.2.3.4) — —
Synechococcus elongatus PCC 7942 0.39 Synpcc7942_2514 argF ornithine carbamoyltransferase 0.40 Synpcc7942_0525 aroB 3-dehydroquinate synthase — —
Mycobacterium tuberculosis H37Rv 0.38 Rv1656 Probable ornithine carbamoyltransferase, anabolic ArgF 0.30 Rv2538c 3-dehydroquinate synthase AroB — —
Shewanella loihica PV-4 0.33 Shew_0204 ornithine carbamoyltransferase (RefSeq) 0.51 Shew_0214 3-dehydroquinate synthase (RefSeq) low > 60
Shewanella sp. ANA-3 0.31 Shewana3_3903 ornithine carbamoyltransferase (RefSeq) 0.52 Shewana3_3893 aroB 3-dehydroquinate synthase (RefSeq) 0.87 45
Shewanella oneidensis MR-1 0.30 SO0277 argF ornithine carbamoyltransferase (NCBI ptt file) 0.53 SO0287 aroB 3-dehydroquinate synthase (NCBI ptt file) low > 76
Rhodanobacter denitrificans MT42 0.22 LRK55_RS02170 N-acetylornithine carbamoyltransferase 0.41 LRK55_RS04085 3-dehydroquinate synthase — —
Rhodanobacter denitrificans FW104-10B01 0.22 LRK54_RS02415 N-acetylornithine carbamoyltransferase 0.41 LRK54_RS04310 3-dehydroquinate synthase — —
Dyella japonica UNC79MFTsu3.2 0.22 ABZR86_RS08730 N-acetylornithine carbamoyltransferase 0.39 ABZR86_RS10480 3-dehydroquinate synthase low > 74
Lysobacter sp. OAE881 0.21 ABIE51_RS13410 N-acetylornithine carbamoyltransferase 0.42 ABIE51_RS16100 3-dehydroquinate synthase — —
Rhodanobacter sp. FW510-T8 0.21 OKGIIK_09480 argF N-acetylornithine carbamoyltransferase 0.41 OKGIIK_11185 aroB 3-dehydroquinate synthase — —
Xanthomonas campestris pv. campestris strain 8004 0.21 Xcc-8004.2316.1 N-acetylornithine carbamoyltransferase (EC 2.1.3.9) 0.38 Xcc-8004.1615.1 3-dehydroquinate synthase (EC 4.2.3.4) low > 74
Kangiella aquimarina DSM 16071 0.19 B158DRAFT_1975 Ornithine carbamoyltransferase 0.44 B158DRAFT_0764 3-dehydroquinate synthase (EC 4.2.3.4) low > 40
Echinicola vietnamensis KMM 6221, DSM 17526 0.16 Echvi_3849 N-succinylornithine carbamoyltransferase (EC 2.1.3.11) (from data) 0.23 Echvi_0121 3-dehydroquinate synthase — —
Parabacteroides merdae CL09T00C40 0.15 HMPREF1078_RS10660 acetylornithine carbamoyltransferase 0.22 HMPREF1078_RS04395 3-dehydroquinate synthase — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.15 CA264_06240 acetylornithine carbamoyltransferase 0.24 CA264_13105 3-dehydroquinate synthase — —
Bacteroides stercoris CC31F 0.15 HMPREF1181_RS03315 N-acetylornithine carbamoyltransferase 0.24 HMPREF1181_RS09265 3-dehydroquinate synthase low > 56
Mucilaginibacter yixingensis YX-36 DSM 26809 0.15 ABZR88_RS15495 acetylornithine carbamoyltransferase 0.27 ABZR88_RS05215 3-dehydroquinate synthase — —

Not shown: 10 genomes with orthologs for BPHYT_RS15915 only; 28 genomes with orthologs for BPHYT_RS17885 only