Conservation of cofitness between BPHYT_RS16245 and BPHYT_RS14895 in Burkholderia phytofirmans PsJN

75 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS16245 phosphoribosylaminoimidazole carboxylase 1.0 BPHYT_RS14895 3-phosphoshikimate 1-carboxyvinyltransferase 0.76 20
Paraburkholderia bryophila 376MFSha3.1 0.95 H281DRAFT_04185 5-(carboxyamino)imidazole ribonucleotide synthase 0.95 H281DRAFT_03922 3-phosphoshikimate 1-carboxyvinyltransferase — —
Paraburkholderia graminis OAS925 0.92 ABIE53_003423 5-(carboxyamino)imidazole ribonucleotide synthase 0.91 ABIE53_003154 3-phosphoshikimate 1-carboxyvinyltransferase — —
Paraburkholderia sabiae LMG 24235 0.85 QEN71_RS02450 5-(carboxyamino)imidazole ribonucleotide synthase 0.90 QEN71_RS04085 3-phosphoshikimate 1-carboxyvinyltransferase 0.63 13
Herbaspirillum seropedicae SmR1 0.56 HSERO_RS03370 phosphoribosylaminoimidazole carboxylase 0.62 HSERO_RS18420 3-phosphoshikimate 1-carboxyvinyltransferase — —
Cupriavidus basilensis FW507-4G11 0.53 RR42_RS03230 phosphoribosylaminoimidazole carboxylase 0.67 RR42_RS04475 3-phosphoshikimate 1-carboxyvinyltransferase — —
Ralstonia sp. UNC404CL21Col 0.49 ABZR87_RS08090 5-(carboxyamino)imidazole ribonucleotide synthase 0.70 ABZR87_RS09465 3-phosphoshikimate 1-carboxyvinyltransferase — —
Ralstonia solanacearum GMI1000 0.49 RS_RS02885 5-(carboxyamino)imidazole ribonucleotide synthase 0.69 RS_RS04510 3-phosphoshikimate 1-carboxyvinyltransferase — —
Ralstonia solanacearum PSI07 0.49 RPSI07_RS21130 5-(carboxyamino)imidazole ribonucleotide synthase 0.69 RPSI07_RS19695 3-phosphoshikimate 1-carboxyvinyltransferase — —
Ralstonia solanacearum IBSBF1503 0.49 RALBFv3_RS12200 5-(carboxyamino)imidazole ribonucleotide synthase 0.69 RALBFv3_RS13775 3-phosphoshikimate 1-carboxyvinyltransferase — —
Ralstonia solanacearum UW163 0.49 UW163_RS01410 5-(carboxyamino)imidazole ribonucleotide synthase 0.69 UW163_RS16035 3-phosphoshikimate 1-carboxyvinyltransferase — —
Caulobacter crescentus NA1000 0.36 CCNA_03392 phosphoribosylaminoimidazole carboxylase NCAIR mutase subunit 0.15 CCNA_03704 3-phosphoshikimate 1-carboxyvinyltransferase — —
Caulobacter crescentus NA1000 Δfur 0.36 CCNA_03392 phosphoribosylaminoimidazole carboxylase NCAIR mutase subunit 0.15 CCNA_03704 3-phosphoshikimate 1-carboxyvinyltransferase low > 67
Sinorhizobium meliloti 1021 0.35 SMc04002 phosphoribosylaminoimidazole carboxylase ATPase subunit 0.17 SMc00333 3-phosphoshikimate 1-carboxyvinyltransferase — —
Rhizobium sp. OAE497 0.35 ABIE40_RS16070 5-(carboxyamino)imidazole ribonucleotide synthase 0.24 ABIE40_RS05420 3-phosphoshikimate 1-carboxyvinyltransferase — —
Azospirillum sp. SherDot2 0.34 MPMX19_01418 N5-carboxyaminoimidazole ribonucleotide synthase 0.13 MPMX19_02233 3-phosphoshikimate 1-carboxyvinyltransferase — —
Azospirillum brasilense Sp245 0.34 AZOBR_RS06140 phosphoribosylaminoimidazole carboxylase 0.14 AZOBR_RS03090 3-phosphoshikimate 1-carboxyvinyltransferase — —
Agrobacterium fabrum C58 0.33 Atu3755 phosphoribosylaminoimidazole carboxylase ATPase subunit 0.22 Atu0642 3-phosphoshikimate 1-carboxyvinyltransferase — —
Rhodospirillum rubrum S1H 0.33 Rru_A1051 Phosphoribosylaminoimidazole carboxylase, ATPase subunit (NCBI) 0.12 Rru_A0295 3-phosphoshikimate 1-carboxyvinyltransferase (NCBI) — —
Brevundimonas sp. GW460-12-10-14-LB2 0.32 A4249_RS08935 5-(carboxyamino)imidazole ribonucleotide synthase 0.16 A4249_RS10920 3-phosphoshikimate 1-carboxyvinyltransferase — —
Magnetospirillum magneticum AMB-1 0.32 AMB_RS11140 5-(carboxyamino)imidazole ribonucleotide synthase 0.15 AMB_RS21555 3-phosphoshikimate 1-carboxyvinyltransferase — —
Bosea sp. OAE506 0.31 ABIE41_RS09245 5-(carboxyamino)imidazole ribonucleotide synthase 0.14 ABIE41_RS03910 3-phosphoshikimate 1-carboxyvinyltransferase — —
Dinoroseobacter shibae DFL-12 0.31 Dshi_0680 phosphoribosylaminoimidazole carboxylase, ATPase subunit (RefSeq) 0.14 Dshi_1022 3-phosphoshikimate 1-carboxyvinyltransferase (RefSeq) — —
Bifidobacterium breve UCC2003 0.30 BBR_RS13300 5-(carboxyamino)imidazole ribonucleotide synthase 0.17 BBR_RS14370 3-phosphoshikimate 1-carboxyvinyltransferase 0.48 2
Sphingomonas koreensis DSMZ 15582 0.29 Ga0059261_1428 5-(carboxyamino)imidazole ribonucleotide synthase 0.14 Ga0059261_0167 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) — —
Phaeobacter inhibens DSM 17395 0.29 PGA1_c24870 phosphoribosylaminoimidazole carboxylase ATPase subunit PurK 0.13 PGA1_c04810 3-phosphoshikimate 1-carboxyvinyltransferase AroA — —
Rhodopseudomonas palustris CGA009 0.28 TX73_021645 5-(carboxyamino)imidazole ribonucleotide synthase 0.14 TX73_000320 3-phosphoshikimate 1-carboxyvinyltransferase — —
Mycobacterium tuberculosis H37Rv 0.28 Rv3276c Probable phosphoribosylaminoimidazole carboxylase ATPase subunit PurK (air carboxylase) (AIRC) 0.16 Rv3227 3-phosphoshikimate 1-carboxyvinyltransferase AroA (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS) — —
Pseudomonas fluorescens SBW25 0.28 PFLU_RS29800 5-(carboxyamino)imidazole ribonucleotide synthase 0.21 PFLU_RS13540 3-phosphoshikimate 1-carboxyvinyltransferase — —
Pseudomonas fluorescens SBW25-INTG 0.28 PFLU_RS29800 5-(carboxyamino)imidazole ribonucleotide synthase 0.21 PFLU_RS13540 3-phosphoshikimate 1-carboxyvinyltransferase — —
Pseudomonas syringae pv. syringae B728a 0.27 Psyr_5047 5-(carboxyamino)imidazole ribonucleotide synthase 0.25 Psyr_0888 3-phosphoshikimate 1-carboxyvinyltransferase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.27 Psyr_5047 5-(carboxyamino)imidazole ribonucleotide synthase 0.25 Psyr_0888 3-phosphoshikimate 1-carboxyvinyltransferase — —
Rhodanobacter sp. FW510-T8 0.27 OKGIIK_03050 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.17 OKGIIK_06920 aroA 3-phosphoshikimate 1-carboxyvinyltransferase — —
Dyella japonica UNC79MFTsu3.2 0.27 ABZR86_RS09830 5-(carboxyamino)imidazole ribonucleotide synthase 0.18 ABZR86_RS02230 3-phosphoshikimate 1-carboxyvinyltransferase — —
Pseudomonas simiae WCS417 0.27 PS417_28115 phosphoribosylaminoimidazole carboxylase 0.21 PS417_12855 3-phosphoshikimate 1-carboxyvinyltransferase — —
Xanthomonas campestris pv. campestris strain 8004 0.27 Xcc-8004.2012.1 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) 0.15 Xcc-8004.3281.1 5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19) 0.80 9
Lysobacter sp. OAE881 0.27 ABIE51_RS15390 5-(carboxyamino)imidazole ribonucleotide synthase 0.18 ABIE51_RS12135 3-phosphoshikimate 1-carboxyvinyltransferase — —
Rhodanobacter denitrificans MT42 0.26 LRK55_RS13530 5-(carboxyamino)imidazole ribonucleotide synthase 0.17 LRK55_RS00130 3-phosphoshikimate 1-carboxyvinyltransferase low > 63
Rhodanobacter denitrificans FW104-10B01 0.26 LRK54_RS13815 5-(carboxyamino)imidazole ribonucleotide synthase 0.16 LRK54_RS00390 3-phosphoshikimate 1-carboxyvinyltransferase — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.25 Echvi_0884 phosphoribosylaminoimidazole carboxylase, PurK protein 0.25 Echvi_0122 5-enolpyruvylshikimate-3-phosphate synthase — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.25 CA264_12600 5-(carboxyamino)imidazole ribonucleotide synthase 0.21 CA264_13100 3-phosphoshikimate 1-carboxyvinyltransferase low > 74
Alteromonas macleodii MIT1002 0.25 MIT1002_00522 N5-carboxyaminoimidazole ribonucleotide synthase 0.53 MIT1002_02191 3-phosphoshikimate 1-carboxyvinyltransferase — —
Synechococcus elongatus PCC 7942 0.24 Synpcc7942_1428 purK phosphoribosylaminoimidazole carboxylase ATPase subunit 0.15 Synpcc7942_0232 aroA 3-phosphoshikimate 1-carboxyvinyltransferase — —
Pedobacter sp. GW460-11-11-14-LB5 0.23 CA265_RS07745 5-(carboxyamino)imidazole ribonucleotide synthase 0.24 CA265_RS11640 3-phosphoshikimate 1-carboxyvinyltransferase — —
Vibrio cholerae E7946 ATCC 55056 0.23 CSW01_00260 5-(carboxyamino)imidazole ribonucleotide synthase 0.58 CSW01_08705 3-phosphoshikimate 1-carboxyvinyltransferase low > 62
Kangiella aquimarina DSM 16071 0.23 B158DRAFT_0610 5-(carboxyamino)imidazole ribonucleotide synthase 0.21 B158DRAFT_2432 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.21 ABZR88_RS09290 5-(carboxyamino)imidazole ribonucleotide synthase 0.25 ABZR88_RS07000 3-phosphoshikimate 1-carboxyvinyltransferase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.21 GFF4438 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) 0.55 GFF3665 5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19) low > 78
Shewanella loihica PV-4 0.21 Shew_1249 phosphoribosylaminoimidazole carboxylase, ATPase subunit (RefSeq) 0.56 Shew_1952 3-phosphoshikimate 1-carboxyvinyltransferase (RefSeq) low > 60
Klebsiella michiganensis M5al 0.20 BWI76_RS07065 5-(carboxyamino)imidazole ribonucleotide synthase 0.54 BWI76_RS09760 3-phosphoshikimate 1-carboxyvinyltransferase 0.72 59
Rahnella sp. WP5 0.20 EX31_RS22620 5-(carboxyamino)imidazole ribonucleotide synthase 0.56 EX31_RS18250 3-phosphoshikimate 1-carboxyvinyltransferase — —
Serratia liquefaciens MT49 0.20 IAI46_05370 5-(carboxyamino)imidazole ribonucleotide synthase 0.54 IAI46_08640 3-phosphoshikimate 1-carboxyvinyltransferase 0.71 38
Enterobacter asburiae PDN3 0.19 EX28DRAFT_2460 phosphoribosylaminoimidazole carboxylase, PurK protein 0.54 EX28DRAFT_2027 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) — —
Pantoea sp. MT58 0.19 IAI47_14355 5-(carboxyamino)imidazole ribonucleotide synthase 0.54 IAI47_12860 3-phosphoshikimate 1-carboxyvinyltransferase — —
Escherichia coli BW25113 0.19 b0522 purK phosphoribosylaminoimidazole carboxylase (NCBI) 0.54 b0908 aroA 3-phosphoshikimate 1-carboxyvinyltransferase (NCBI) 0.83 20
Escherichia coli ECOR38 0.19 HEPCGN_06480 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.54 HEPCGN_23035 aroA 3-phosphoshikimate 1-carboxyvinyltransferase 0.71 48
Escherichia coli Nissle 1917 0.19 ECOLIN_RS03025 5-(carboxyamino)imidazole ribonucleotide synthase 0.55 ECOLIN_RS04810 3-phosphoshikimate 1-carboxyvinyltransferase low > 55
Enterobacter sp. TBS_079 0.19 MPMX20_01097 N5-carboxyaminoimidazole ribonucleotide synthase 0.55 MPMX20_01567 3-phosphoshikimate 1-carboxyvinyltransferase 0.81 28
Escherichia fergusonii Becca 0.19 EFB2_03540 N5-carboxyaminoimidazole ribonucleotide synthase 0.55 EFB2_03156 3-phosphoshikimate 1-carboxyvinyltransferase low > 86
Escherichia coli BL21 0.19 ECD_00472 N5-carboxyaminoimidazole ribonucleotide synthase 0.54 ECD_00912 5-enolpyruvylshikimate-3-phosphate synthetase 0.65 22
Escherichia coli ECOR27 0.19 NOLOHH_00830 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.54 NOLOHH_22045 aroA 3-phosphoshikimate 1-carboxyvinyltransferase 0.76 52
Escherichia coli ECRC101 0.19 MCAODC_27060 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.54 MCAODC_24875 aroA 3-phosphoshikimate 1-carboxyvinyltransferase low > 87
Escherichia coli ECRC99 0.19 KEDOAH_20130 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.54 KEDOAH_22250 aroA 3-phosphoshikimate 1-carboxyvinyltransferase — —
Escherichia coli ECRC98 0.19 JDDGAC_11490 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.54 JDDGAC_09095 aroA 3-phosphoshikimate 1-carboxyvinyltransferase low > 86
Escherichia coli ECRC62 0.19 BNILDI_22260 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.54 BNILDI_20300 aroA 3-phosphoshikimate 1-carboxyvinyltransferase low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.19 OHPLBJKB_03159 N5-carboxyaminoimidazole ribonucleotide synthase 0.54 OHPLBJKB_02760 3-phosphoshikimate 1-carboxyvinyltransferase low > 73
Escherichia coli ECRC102 0.19 NIAGMN_05895 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.54 NIAGMN_03205 aroA 3-phosphoshikimate 1-carboxyvinyltransferase — —
Escherichia coli ECRC100 0.19 OKFHMN_07840 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.54 OKFHMN_05485 aroA 3-phosphoshikimate 1-carboxyvinyltransferase low > 80
Dickeya dianthicola 67-19 0.18 HGI48_RS15190 5-(carboxyamino)imidazole ribonucleotide synthase 0.54 HGI48_RS09685 3-phosphoshikimate 1-carboxyvinyltransferase — —
Dickeya dianthicola ME23 0.18 DZA65_RS15995 5-(carboxyamino)imidazole ribonucleotide synthase 0.54 DZA65_RS09995 3-phosphoshikimate 1-carboxyvinyltransferase — —
Dickeya dadantii 3937 0.18 DDA3937_RS15110 5-(carboxyamino)imidazole ribonucleotide synthase 0.55 DDA3937_RS09675 3-phosphoshikimate 1-carboxyvinyltransferase — —
Pectobacterium carotovorum WPP14 0.18 HER17_RS06470 5-(carboxyamino)imidazole ribonucleotide synthase 0.52 HER17_RS12285 3-phosphoshikimate 1-carboxyvinyltransferase 0.93 33
Erwinia tracheiphila SCR3 0.18 LU632_RS15250 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.51 LU632_RS09795 aroA 3-phosphoshikimate 1-carboxyvinyltransferase low > 74
Shewanella amazonensis SB2B 0.17 Sama_1063 phosphoribosylaminoimidazole carboxylase ATPase subunit (RefSeq) 0.56 Sama_1734 3-phosphoshikimate 1-carboxyvinyltransferase (RefSeq) low > 62
Shewanella sp. ANA-3 0.16 Shewana3_3156 phosphoribosylaminoimidazole carboxylase ATPase subunit (RefSeq) 0.56 Shewana3_1975 3-phosphoshikimate 1-carboxyvinyltransferase (RefSeq) 0.89 18
Shewanella oneidensis MR-1 0.15 SO3555 purK phosphoribosylaminoimidazole carboxylase, ATPase subunit (NCBI ptt file) 0.56 SO2404 aroA 3-phosphoshikimate 1-carboxyvinyltransferase (NCBI ptt file) 0.83 67

Not shown: 17 genomes with orthologs for BPHYT_RS16245 only; 11 genomes with orthologs for BPHYT_RS14895 only