Conservation of cofitness between BPHYT_RS03650 and BPHYT_RS12475 in Burkholderia phytofirmans PsJN

77 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS03650 DNA mismatch repair protein 1.0 BPHYT_RS12475 DNA mismatch repair protein MutS 0.69 1
Paraburkholderia bryophila 376MFSha3.1 0.88 H281DRAFT_04712 DNA mismatch repair protein MutL 0.93 H281DRAFT_00537 DNA mismatch repair protein MutS low > 103
Paraburkholderia graminis OAS925 0.86 ABIE53_000877 DNA mismatch repair protein MutL 0.91 ABIE53_002719 DNA mismatch repair protein MutS low > 113
Paraburkholderia sabiae LMG 24235 0.81 QEN71_RS26435 DNA mismatch repair endonuclease MutL 0.86 QEN71_RS06085 DNA mismatch repair protein MutS low > 153
Ralstonia solanacearum GMI1000 0.58 RS_RS12850 DNA mismatch repair protein MutL 0.64 RS_RS05735 DNA mismatch repair protein MutS low > 80
Ralstonia solanacearum IBSBF1503 0.58 RALBFv3_RS05230 DNA mismatch repair endonuclease MutL 0.64 RALBFv3_RS14920 DNA mismatch repair protein MutS low > 76
Ralstonia solanacearum UW163 0.58 UW163_RS08395 DNA mismatch repair endonuclease MutL 0.64 UW163_RS12390 DNA mismatch repair protein MutS — —
Ralstonia sp. UNC404CL21Col 0.58 ABZR87_RS00870 DNA mismatch repair endonuclease MutL 0.65 ABZR87_RS10580 DNA mismatch repair protein MutS 0.44 2
Ralstonia solanacearum PSI07 0.57 RPSI07_RS12070 DNA mismatch repair endonuclease MutL 0.65 RPSI07_RS18440 DNA mismatch repair protein MutS low > 81
Castellaniella sp019104865 MT123 0.45 ABCV34_RS08785 DNA mismatch repair endonuclease MutL 0.49 ABCV34_RS00270 DNA mismatch repair protein MutS low > 48
Variovorax sp. SCN45 0.44 GFF4800 DNA mismatch repair protein MutL 0.47 GFF6634 DNA mismatch repair protein MutS low > 127
Variovorax sp. OAS795 0.43 ABID97_RS20310 DNA mismatch repair endonuclease MutL 0.47 ABID97_RS20815 DNA mismatch repair protein MutS low > 91
Dechlorosoma suillum PS 0.43 Dsui_1551 DNA mismatch repair protein MutL 0.58 Dsui_2244 DNA mismatch repair protein MutS low > 51
Pseudomonas putida KT2440 0.40 PP_4896 DNA mismatch repair protein MutL 0.47 PP_1626 DNA mismatch repair protein MutS 0.51 2
Pseudomonas stutzeri RCH2 0.40 Psest_0681 DNA mismatch repair protein MutL 0.47 Psest_2875 DNA mismatch repair protein MutS 0.41 1
Pseudomonas syringae pv. syringae B728a 0.40 Psyr_0570 DNA mismatch repair protein MutL 0.47 Psyr_1376 DNA mismatch repair protein MutS low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.40 Psyr_0570 DNA mismatch repair protein MutL 0.47 Psyr_1376 DNA mismatch repair protein MutS low > 86
Pseudomonas sp. S08-1 0.40 OH686_09480 DNA mismatch repair protein MutL 0.46 OH686_18195 DNA mismatch repair protein MutS 0.91 11
Marinobacter adhaerens HP15 0.39 HP15_2501 DNA mismatch repair protein mutL 0.49 HP15_1047 DNA mismatch repair protein MutS low > 73
Xanthomonas campestris pv. campestris strain 8004 0.39 Xcc-8004.2256.1 DNA mismatch repair protein MutL 0.46 Xcc-8004.3760.1 DNA mismatch repair protein MutS low > 74
Pseudomonas fluorescens SBW25 0.39 PFLU_RS02560 DNA mismatch repair endonuclease MutL 0.47 PFLU_RS05765 DNA mismatch repair protein MutS low > 109
Pseudomonas fluorescens SBW25-INTG 0.39 PFLU_RS02560 DNA mismatch repair endonuclease MutL 0.47 PFLU_RS05765 DNA mismatch repair protein MutS 0.34 89
Pseudomonas fluorescens FW300-N2C3 0.39 AO356_08665 DNA mismatch repair protein 0.48 AO356_05875 DNA mismatch repair protein MutS 0.33 37
Pseudomonas simiae WCS417 0.39 PS417_02480 DNA mismatch repair protein 0.47 PS417_05680 DNA mismatch repair protein MutS 0.40 2
Pseudomonas fluorescens FW300-N2E2 0.39 Pf6N2E2_3616 DNA mismatch repair protein MutL 0.48 Pf6N2E2_3035 DNA mismatch repair protein MutS 0.37 4
Pseudomonas sp. RS175 0.39 PFR28_05119 DNA mismatch repair protein MutL 0.47 PFR28_00429 DNA mismatch repair protein MutS 0.41 15
Pseudomonas fluorescens FW300-N1B4 0.39 Pf1N1B4_1414 DNA mismatch repair protein MutL 0.47 Pf1N1B4_3117 DNA mismatch repair protein MutS 0.31 25
Pseudomonas fluorescens FW300-N2E3 0.38 AO353_13135 DNA mismatch repair protein 0.47 AO353_16625 DNA mismatch repair protein MutS 0.37 31
Lysobacter sp. OAE881 0.38 ABIE51_RS08065 DNA mismatch repair endonuclease MutL 0.48 ABIE51_RS07785 DNA mismatch repair protein MutS low > 62
Rhodanobacter denitrificans FW104-10B01 0.38 LRK54_RS15150 DNA mismatch repair endonuclease MutL 0.46 LRK54_RS14935 DNA mismatch repair protein MutS low > 59
Rhodanobacter denitrificans MT42 0.38 LRK55_RS14865 DNA mismatch repair endonuclease MutL 0.47 LRK55_RS14650 DNA mismatch repair protein MutS low > 63
Pseudomonas fluorescens GW456-L13 0.38 PfGW456L13_156 DNA mismatch repair protein MutL 0.47 PfGW456L13_4672 DNA mismatch repair protein MutS 0.32 50
Cupriavidus basilensis FW507-4G11 0.38 RR42_RS17205 DNA mismatch repair protein 0.64 RR42_RS06285 DNA mismatch repair protein MutS 0.45 15
Dyella japonica UNC79MFTsu3.2 0.37 ABZR86_RS00855 DNA mismatch repair endonuclease MutL 0.46 ABZR86_RS00630 DNA mismatch repair protein MutS 0.63 1
Rhodanobacter sp. FW510-T8 0.37 OKGIIK_03920 mutL DNA mismatch repair endonuclease MutL 0.47 OKGIIK_03705 mutS DNA mismatch repair protein MutS low > 52
Herbaspirillum seropedicae SmR1 0.34 HSERO_RS04190 DNA mismatch repair protein 0.60 HSERO_RS16360 DNA mismatch repair protein MutS low > 78
Brevundimonas sp. GW460-12-10-14-LB2 0.31 A4249_RS04225 DNA mismatch repair endonuclease MutL 0.28 A4249_RS12110 DNA mismatch repair protein MutS low > 48
Azospirillum brasilense Sp245 0.30 AZOBR_RS05025 DNA mismatch repair protein MutL 0.30 AZOBR_RS02125 DNA mismatch repair protein MutS low > 97
Azospirillum sp. SherDot2 0.30 MPMX19_01619 DNA mismatch repair protein MutL 0.31 MPMX19_00908 DNA mismatch repair protein MutS low > 112
Sphingomonas koreensis DSMZ 15582 0.29 Ga0059261_0371 DNA mismatch repair protein MutL 0.30 Ga0059261_3784 DNA mismatch repair protein MutS low > 68
Caulobacter crescentus NA1000 Δfur 0.29 CCNA_00731 DNA mismatch repair protein mutL 0.26 CCNA_00012 DNA mismatch repair protein MutS low > 67
Caulobacter crescentus NA1000 0.29 CCNA_00731 DNA mismatch repair protein mutL 0.26 CCNA_00012 DNA mismatch repair protein MutS 0.81 4
Phaeobacter inhibens DSM 17395 0.28 PGA1_c32740 DNA mismatch repair protein MutL 0.31 PGA1_c35000 DNA mismatch repair protein MutS low > 62
Agrobacterium fabrum C58 0.28 Atu0699 DNA mismatch repair protein MutL 0.31 Atu0345 DNA mismatch repair protein, MutS family 0.41 3
Rhizobium sp. OAE497 0.28 ABIE40_RS05235 DNA mismatch repair endonuclease MutL 0.31 ABIE40_RS01775 DNA mismatch repair protein MutS low > 107
Bosea sp. OAE506 0.28 ABIE41_RS23235 DNA mismatch repair endonuclease MutL 0.28 ABIE41_RS03650 DNA mismatch repair protein MutS low > 77
Pantoea sp. MT58 0.25 IAI47_02580 DNA mismatch repair endonuclease MutL 0.47 IAI47_04240 DNA mismatch repair protein MutS low > 76
Dickeya dadantii 3937 0.25 DDA3937_RS18620 DNA mismatch repair endonuclease MutL 0.48 DDA3937_RS05230 DNA mismatch repair protein MutS low > 74
Pectobacterium carotovorum WPP14 0.25 HER17_RS02575 DNA mismatch repair endonuclease MutL 0.48 HER17_RS16220 DNA mismatch repair protein MutS low > 75
Dickeya dianthicola ME23 0.24 DZA65_RS19690 DNA mismatch repair endonuclease MutL 0.47 DZA65_RS05570 DNA mismatch repair protein MutS low > 75
Pontibacter actiniarum KMM 6156, DSM 19842 0.24 CA264_13305 DNA mismatch repair protein MutL 0.33 CA264_18545 DNA mismatch repair protein MutS — —
Erwinia tracheiphila SCR3 0.24 LU632_RS02045 mutL DNA mismatch repair endonuclease MutL 0.46 LU632_RS06485 mutS DNA mismatch repair protein MutS low > 74
Enterobacter sp. TBS_079 0.24 MPMX20_00451 DNA mismatch repair protein MutL 0.47 MPMX20_03619 DNA mismatch repair protein MutS 0.18 43
Rahnella sp. WP5 0.24 EX31_RS08830 DNA mismatch repair endonuclease MutL 0.46 EX31_RS07820 DNA mismatch repair protein MutS low > 89
Enterobacter asburiae PDN3 0.23 EX28DRAFT_3367 DNA mismatch repair protein MutL 0.47 EX28DRAFT_2829 DNA mismatch repair protein MutS low > 76
Serratia liquefaciens MT49 0.23 IAI46_01615 DNA mismatch repair endonuclease MutL 0.47 IAI46_03800 DNA mismatch repair protein MutS low > 86
Escherichia coli ECOR27 0.23 NOLOHH_04530 mutL DNA mismatch repair endonuclease MutL 0.47 NOLOHH_12370 mutS DNA mismatch repair protein MutS 0.48 60
Escherichia coli BL21 0.23 ECD_04037 methyl-directed mismatch repair protein 0.47 ECD_02583 methyl-directed mismatch repair protein low > 61
Escherichia coli BW25113 0.23 b4170 mutL DNA mismatch repair protein (NCBI) 0.47 b2733 mutS DNA mismatch repair protein (NCBI) 0.36 8
Escherichia coli ECRC62 0.23 BNILDI_06960 mutL DNA mismatch repair endonuclease MutL 0.47 BNILDI_10920 mutS DNA mismatch repair protein MutS low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.23 OHPLBJKB_03872 DNA mismatch repair protein MutL 0.47 OHPLBJKB_01000 DNA mismatch repair protein MutS 0.86 2
Escherichia fergusonii Becca 0.23 EFB2_04365 DNA mismatch repair protein MutL 0.47 EFB2_01179 DNA mismatch repair protein MutS low > 86
Escherichia coli Nissle 1917 0.23 ECOLIN_RS24220 DNA mismatch repair endonuclease MutL 0.47 ECOLIN_RS15275 DNA mismatch repair protein MutS 0.41 39
Escherichia coli ECOR38 0.23 HEPCGN_10495 mutL DNA mismatch repair endonuclease MutL 0.47 HEPCGN_19705 mutS DNA mismatch repair protein MutS 0.91 3
Escherichia coli ECRC102 0.23 NIAGMN_10115 mutL DNA mismatch repair endonuclease MutL 0.47 NIAGMN_18295 mutS DNA mismatch repair protein MutS — —
Escherichia coli ECRC99 0.23 KEDOAH_15890 mutL DNA mismatch repair endonuclease MutL 0.47 KEDOAH_07610 mutS DNA mismatch repair protein MutS — —
Escherichia coli ECRC101 0.23 MCAODC_02780 mutL DNA mismatch repair endonuclease MutL 0.47 MCAODC_11050 mutS DNA mismatch repair protein MutS low > 87
Escherichia coli ECRC100 0.23 OKFHMN_12265 mutL DNA mismatch repair endonuclease MutL 0.47 OKFHMN_20525 mutS DNA mismatch repair protein MutS low > 80
Escherichia coli ECRC98 0.23 JDDGAC_15905 mutL DNA mismatch repair endonuclease MutL 0.47 JDDGAC_24190 mutS DNA mismatch repair protein MutS low > 86
Vibrio cholerae E7946 ATCC 55056 0.23 CSW01_01825 DNA mismatch repair protein MutL 0.47 CSW01_02840 DNA mismatch repair protein MutS low > 62
Shewanella loihica PV-4 0.22 Shew_0564 DNA mismatch repair protein MutL (RefSeq) 0.46 Shew_1214 DNA mismatch repair protein (RefSeq) 0.74 2
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.22 GFF823 DNA mismatch repair protein MutL 0.48 GFF4773 DNA mismatch repair protein MutS low > 78
Shewanella amazonensis SB2B 0.22 Sama_3027 mutL DNA mismatch repair protein (RefSeq) 0.45 Sama_1045 DNA mismatch repair protein MutS (RefSeq) 0.88 1
Shewanella oneidensis MR-1 0.22 SO0601 mutL DNA mismatch repair protein MutL (NCBI ptt file) 0.46 SO3431 mutS DNA mismatch repair protein MutS (NCBI ptt file) 0.53 2
Phocaeicola dorei CL03T12C01 0.21 ABI39_RS02285 DNA mismatch repair endonuclease MutL 0.33 ABI39_RS05500 DNA mismatch repair protein MutS 0.55 5
Phocaeicola vulgatus CL09T03C04 0.21 HMPREF1058_RS02970 DNA mismatch repair endonuclease MutL 0.33 HMPREF1058_RS11435 DNA mismatch repair protein MutS low > 67
Bacteroides ovatus ATCC 8483 0.20 BACOVA_00344 DNA mismatch repair domain protein 0.32 BACOVA_02824 DNA mismatch repair protein MutS — —
Rhodospirillum rubrum S1H 0.12 Rru_A2946 DNA mismatch repair protein (NCBI) 0.31 Rru_A3541 MutS 1 protein (NCBI) low > 58

Not shown: 0 genomes with orthologs for BPHYT_RS03650 only; 22 genomes with orthologs for BPHYT_RS12475 only