Conservation of cofitness between BPHYT_RS16835 and BPHYT_RS06555 in Burkholderia phytofirmans PsJN

60 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS16835 glyceraldehyde-3-phosphate dehydrogenase 1.0 BPHYT_RS06555 ketol-acid reductoisomerase 0.81 12
Paraburkholderia bryophila 376MFSha3.1 0.99 H281DRAFT_06315 glyceraldehyde-3-phosphate dehydrogenase (NAD+) 0.95 H281DRAFT_04553 ketol-acid reductoisomerase low > 103
Paraburkholderia graminis OAS925 0.99 ABIE53_003536 glyceraldehyde 3-phosphate dehydrogenase 0.99 ABIE53_001576 ketol-acid reductoisomerase
Paraburkholderia sabiae LMG 24235 0.96 QEN71_RS27005 type I glyceraldehyde-3-phosphate dehydrogenase 0.93 QEN71_RS24215 ketol-acid reductoisomerase low > 153
Herbaspirillum seropedicae SmR1 0.89 HSERO_RS07125 glyceraldehyde-3-phosphate dehydrogenase 0.88 HSERO_RS08660 ketol-acid reductoisomerase
Castellaniella sp019104865 MT123 0.87 ABCV34_RS15455 type I glyceraldehyde-3-phosphate dehydrogenase 0.87 ABCV34_RS01220 ketol-acid reductoisomerase
Dyella japonica UNC79MFTsu3.2 0.76 ABZR86_RS18615 type I glyceraldehyde-3-phosphate dehydrogenase 0.54 ABZR86_RS15940 ketol-acid reductoisomerase 0.77 5
Pseudomonas syringae pv. syringae B728a 0.67 Psyr_1108 glyceraldehyde-3-phosphate dehydrogenase 0.71 Psyr_0848 ketol-acid reductoisomerase 0.54 18
Pseudomonas syringae pv. syringae B728a ΔmexB 0.67 Psyr_1108 glyceraldehyde-3-phosphate dehydrogenase 0.71 Psyr_0848 ketol-acid reductoisomerase low > 86
Pseudomonas fluorescens SBW25-INTG 0.66 PFLU_RS24335 type I glyceraldehyde-3-phosphate dehydrogenase 0.71 PFLU_RS25640 ketol-acid reductoisomerase low > 109
Pseudomonas fluorescens SBW25 0.66 PFLU_RS24335 type I glyceraldehyde-3-phosphate dehydrogenase 0.71 PFLU_RS25640 ketol-acid reductoisomerase low > 109
Pseudomonas simiae WCS417 0.66 PS417_22695 glyceraldehyde-3-phosphate dehydrogenase 0.71 PS417_23800 ketol-acid reductoisomerase 0.21 73
Pseudomonas fluorescens FW300-N1B4 0.66 Pf1N1B4_602 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) 0.71 Pf1N1B4_2880 Ketol-acid reductoisomerase (EC 1.1.1.86) 0.46 27
Marinobacter adhaerens HP15 0.65 HP15_2175 glyceraldehyde-3-phosphate dehydrogenase, type I 0.67 HP15_533 ketol-acid reductoisomerase
Pseudomonas sp. RS175 0.65 PFR28_00560 Glyceraldehyde-3-phosphate dehydrogenase 1 0.70 PFR28_03697 Ketol-acid reductoisomerase (NADP(+)) 0.26 60
Pseudomonas fluorescens FW300-N2E3 0.65 AO353_03425 glyceraldehyde-3-phosphate dehydrogenase 0.71 AO353_14505 ketol-acid reductoisomerase low > 101
Pseudomonas fluorescens GW456-L13 0.65 PfGW456L13_1888 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) 0.71 PfGW456L13_1540 Ketol-acid reductoisomerase (EC 1.1.1.86) 0.39 80
Pseudomonas fluorescens FW300-N2C3 0.65 AO356_05225 glyceraldehyde-3-phosphate dehydrogenase 0.71 AO356_16180 ketol-acid reductoisomerase 0.34 78
Pseudomonas fluorescens FW300-N2E2 0.65 Pf6N2E2_2899 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) 0.70 Pf6N2E2_5177 Ketol-acid reductoisomerase (EC 1.1.1.86) 0.35 64
Sinorhizobium meliloti 1021 0.62 SMc03979 glyceraldehyde-3-phosphate dehydrogenase 0.68 SMc04346 ketol-acid reductoisomerase 0.83 39
Pseudomonas putida KT2440 0.62 PP_1009 glyceraldehyde-3-phosphate dehydrogenase 0.70 PP_4678 Ketol-acid reductoisomerase 0.25 56
Rhodopseudomonas palustris CGA009 0.61 TX73_004865 type I glyceraldehyde-3-phosphate dehydrogenase 0.71 TX73_010485 ketol-acid reductoisomerase
Agrobacterium fabrum C58 0.61 Atu3737 glyceraldehyde 3-phosphate dehydrogenase 0.67 Atu2019 ketol-acid reductoisomerase
Rhodospirillum rubrum S1H 0.61 Rru_A0222 Glyceraldehyde-3-phosphate dehydrogenase, type I (NCBI) 0.70 Rru_A0469 Ketol-acid reductoisomerase (NCBI)
Sphingomonas koreensis DSMZ 15582 0.60 Ga0059261_0730 glyceraldehyde-3-phosphate dehydrogenase, type I 0.67 Ga0059261_0066 ketol-acid reductoisomerase (EC 1.1.1.86)
Rhizobium sp. OAE497 0.60 ABIE40_RS15870 type I glyceraldehyde-3-phosphate dehydrogenase 0.68 ABIE40_RS11360 ketol-acid reductoisomerase
Azospirillum brasilense Sp245 0.59 AZOBR_RS10375 glyceraldehyde-3-phosphate dehydrogenase 0.68 AZOBR_RS06570 ketol-acid reductoisomerase
Dinoroseobacter shibae DFL-12 0.59 Dshi_1742 glyceraldehyde-3-phosphate dehydrogenase, type I (RefSeq) 0.69 Dshi_2396 ketol-acid reductoisomerase (RefSeq)
Azospirillum sp. SherDot2 0.59 MPMX19_02850 Glyceraldehyde-3-phosphate dehydrogenase 1 0.69 MPMX19_01774 Ketol-acid reductoisomerase (NADP(+))
Dechlorosoma suillum PS 0.58 Dsui_1560 glyceraldehyde-3-phosphate dehydrogenase, type I 0.80 Dsui_3527 ketol-acid reductoisomerase
Brevundimonas sp. GW460-12-10-14-LB2 0.57 A4249_RS10040 type I glyceraldehyde-3-phosphate dehydrogenase 0.49 A4249_RS10025 ketol-acid reductoisomerase
Phaeobacter inhibens DSM 17395 0.56 PGA1_c27490 glyceraldehyde-3-phosphate dehydrogenase Gap 0.69 PGA1_c06580 ketol-acid reductoisomerase IlvC
Caulobacter crescentus NA1000 Δfur 0.56 CCNA_03358 glyceraldehyde 3-phosphate dehydrogenase 0.70 CCNA_02204 ketol-acid reductoisomerase/2-dehydropantoate 2-reductase
Caulobacter crescentus NA1000 0.56 CCNA_03358 glyceraldehyde 3-phosphate dehydrogenase 0.70 CCNA_02204 ketol-acid reductoisomerase/2-dehydropantoate 2-reductase
Pseudomonas stutzeri RCH2 0.53 Psest_3784 glyceraldehyde-3-phosphate dehydrogenase, type I 0.71 Psest_1038 ketol-acid reductoisomerase
Mycobacterium tuberculosis H37Rv 0.52 Rv1436 Probable glyceraldehyde 3-phosphate dehydrogenase Gap (GAPDH) 0.55 Rv3001c Probable KETOL-acid reductoisomerase IlvC (acetohydroxy-acid isomeroreductase) (alpha-keto-beta-hydroxylacil reductoisomerase)
Pseudomonas sp. S08-1 0.51 OH686_10765 erythrose-4-phosphate dehydrogenase 0.72 OH686_08115 ketol-acid reductoisomerase
Acinetobacter radioresistens SK82 0.50 MPMX26_01087 D-erythrose-4-phosphate dehydrogenase 0.72 MPMX26_00474 Ketol-acid reductoisomerase (NADP(+)) low > 36
Variovorax sp. SCN45 0.49 GFF7175 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) 0.85 GFF1161 Ketol-acid reductoisomerase (NADP(+)) (EC 1.1.1.86)
Ralstonia solanacearum PSI07 0.49 RPSI07_RS11435 type I glyceraldehyde-3-phosphate dehydrogenase 0.91 RPSI07_RS14265 ketol-acid reductoisomerase
Desulfovibrio vulgaris Hildenborough JW710 0.49 DVU0565 gap-1 glyceraldehyde 3-phosphate dehydrogenase (TIGR) 0.60 DVU1378 ilvC ketol-acid reductoisomerase (TIGR) low > 55
Ralstonia solanacearum IBSBF1503 0.49 RALBFv3_RS05865 type I glyceraldehyde-3-phosphate dehydrogenase 0.92 RALBFv3_RS03040 ketol-acid reductoisomerase
Variovorax sp. OAS795 0.49 ABID97_RS02440 type I glyceraldehyde-3-phosphate dehydrogenase 0.85 ABID97_RS14895 ketol-acid reductoisomerase
Ralstonia solanacearum UW163 0.49 UW163_RS07760 type I glyceraldehyde-3-phosphate dehydrogenase 0.92 UW163_RS10685 ketol-acid reductoisomerase
Ralstonia solanacearum GMI1000 0.49 RS_RS13755 aldehyde dehydrogenase 0.91 RS_RS10410 ketol-acid reductoisomerase
Rhodanobacter denitrificans FW104-10B01 0.49 LRK54_RS05785 type I glyceraldehyde-3-phosphate dehydrogenase 0.54 LRK54_RS10315 ketol-acid reductoisomerase low > 59
Ralstonia sp. UNC404CL21Col 0.49 ABZR87_RS01435 type I glyceraldehyde-3-phosphate dehydrogenase 0.91 ABZR87_RS14945 ketol-acid reductoisomerase
Rhodanobacter denitrificans MT42 0.49 LRK55_RS05540 type I glyceraldehyde-3-phosphate dehydrogenase 0.54 LRK55_RS09955 ketol-acid reductoisomerase low > 63
Cupriavidus basilensis FW507-4G11 0.48 RR42_RS17570 glyceraldehyde-3-phosphate dehydrogenase 0.91 RR42_RS05445 ketol-acid reductoisomerase
Mucilaginibacter yixingensis YX-36 DSM 26809 0.48 ABZR88_RS12470 type I glyceraldehyde-3-phosphate dehydrogenase 0.21 ABZR88_RS11590 ketol-acid reductoisomerase
Lysobacter sp. OAE881 0.47 ABIE51_RS17095 type I glyceraldehyde-3-phosphate dehydrogenase 0.50 ABIE51_RS17545 ketol-acid reductoisomerase low > 62
Echinicola vietnamensis KMM 6221, DSM 17526 0.47 Echvi_3029 glyceraldehyde-3-phosphate dehydrogenase, type I 0.21 Echvi_2058 ketol-acid reductoisomerase
Synechococcus elongatus PCC 7942 0.47 Synpcc7942_1742 gap2 glyceraldehyde-3-phosphate dehydrogenase 0.62 Synpcc7942_1552 ilvC ketol-acid reductoisomerase
Rhodanobacter sp. FW510-T8 0.47 OKGIIK_01060 gap type I glyceraldehyde-3-phosphate dehydrogenase 0.54 OKGIIK_13605 ilvC ketol-acid reductoisomerase low > 52
Xanthomonas campestris pv. campestris strain 8004 0.47 Xcc-8004.1236.1 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) 0.52 Xcc-8004.1060.1 Ketol-acid reductoisomerase (EC 1.1.1.86) 0.38 53
Acidovorax sp. GW101-3H11 0.46 Ac3H11_648 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) 0.76 Ac3H11_527 Ketol-acid reductoisomerase (EC 1.1.1.86)
Desulfovibrio vulgaris Miyazaki F 0.46 DvMF_1440 glyceraldehyde-3-phosphate dehydrogenase, type I (RefSeq) 0.60 DvMF_0155 ketol-acid reductoisomerase (RefSeq) low > 51
Bacteroides ovatus ATCC 8483 0.45 BACOVA_05096 glyceraldehyde-3-phosphate dehydrogenase, type I 0.20 BACOVA_03306 ketol-acid reductoisomerase
Magnetospirillum magneticum AMB-1 0.44 AMB_RS02635 type I glyceraldehyde-3-phosphate dehydrogenase 0.69 AMB_RS17750 ketol-acid reductoisomerase
Hydrogenophaga sp. GW460-11-11-14-LB1 0.43 GFF1114 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) 0.79 GFF4278 Ketol-acid reductoisomerase (EC 1.1.1.86)
Bifidobacterium breve UCC2003 0.38 BBR_RS16790 type I glyceraldehyde-3-phosphate dehydrogenase 0.49 BBR_RS10830 ketol-acid reductoisomerase

Not shown: 41 genomes with orthologs for BPHYT_RS16835 only; 2 genomes with orthologs for BPHYT_RS06555 only