| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Burkholderia phytofirmans PsJN | 1.0 | BPHYT_RS16490 | | glycerol-3-phosphate dehydrogenase | 1.0 | BPHYT_RS03495 | | hypothetical protein | 0.33 | 8 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.91 | H281DRAFT_04228 | | homodimeric glycerol 3-phosphate dehydrogenase (quinone) | 0.89 | H281DRAFT_04680 | | hypothetical protein | low | > 103 |
| Paraburkholderia graminis OAS925 | 0.90 | ABIE53_003468 | | glycerol-3-phosphate dehydrogenase | 0.90 | ABIE53_000841 | | pyridoxal phosphate enzyme (YggS family) | low | > 113 |
| Paraburkholderia sabiae LMG 24235 | 0.79 | QEN71_RS02235 | | glycerol-3-phosphate dehydrogenase | 0.84 | QEN71_RS26595 | | YggS family pyridoxal phosphate-dependent enzyme | — | — |
| Variovorax sp. SCN45 | 0.60 | GFF2677 | | Aerobic glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) | 0.61 | GFF3744 | | Pyridoxal phosphate-containing protein YggS | — | — |
| Azospirillum sp. SherDot2 | 0.59 | MPMX19_05967 | | D-erythritol 1-phosphate dehydrogenase | 0.28 | MPMX19_00050 | | Pyridoxal phosphate homeostasis protein | low | > 112 |
| Variovorax sp. OAS795 | 0.58 | ABID97_RS19955 | | glycerol-3-phosphate dehydrogenase | 0.60 | ABID97_RS00250 | | YggS family pyridoxal phosphate-dependent enzyme | — | — |
| Herbaspirillum seropedicae SmR1 | 0.58 | HSERO_RS04840 | | glycerol-3-phosphate dehydrogenase | 0.59 | HSERO_RS18995 | | hypothetical protein | — | — |
| Ralstonia sp. UNC404CL21Col | 0.56 | ABZR87_RS03020 | | glycerol-3-phosphate dehydrogenase | 0.62 | ABZR87_RS01225 | | YggS family pyridoxal phosphate-dependent enzyme | 0.29 | 62 |
| Dyella japonica UNC79MFTsu3.2 | 0.55 | ABZR86_RS20025 | | glycerol-3-phosphate dehydrogenase | 0.30 | ABZR86_RS09305 | | YggS family pyridoxal phosphate-dependent enzyme | — | — |
| Ralstonia solanacearum PSI07 | 0.55 | RPSI07_RS09885 | | glycerol-3-phosphate dehydrogenase | 0.56 | RPSI07_RS11725 | | YggS family pyridoxal phosphate-dependent enzyme | low | > 81 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.54 | Xcc-8004.471.1 | | Aerobic glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) | 0.39 | Xcc-8004.1711.1 | | Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC | low | > 74 |
| Ralstonia solanacearum GMI1000 | 0.54 | RS_RS15300 | | glycerol-3-phosphate dehydrogenase | 0.57 | RS_RS13435 | | YggS family pyridoxal phosphate-dependent enzyme | low | > 80 |
| Ralstonia solanacearum UW163 | 0.54 | UW163_RS06260 | | glycerol-3-phosphate dehydrogenase | 0.57 | UW163_RS08050 | | YggS family pyridoxal phosphate-dependent enzyme | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.54 | RALBFv3_RS07360 | | glycerol-3-phosphate dehydrogenase | 0.57 | RALBFv3_RS05575 | | YggS family pyridoxal phosphate-dependent enzyme | low | > 76 |
| Azospirillum brasilense Sp245 | 0.53 | AZOBR_RS25870 | | glycerol-3-phosphate dehydrogenase | 0.30 | AZOBR_RS01870 | | alanine racemase | — | — |
| Sinorhizobium meliloti 1021 | 0.51 | SMc01620 | | glycerol-3-phosphate dehydrogenase | 0.30 | SMc02812 | | hypothetical protein | low | > 103 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.49 | Psyr_3907 | | homodimeric glycerol 3-phosphate dehydrogenase (quinone) | 0.56 | Psyr_0477 | | Protein of unknown function UPF0001 | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.49 | Psyr_3907 | | homodimeric glycerol 3-phosphate dehydrogenase (quinone) | 0.56 | Psyr_0477 | | Protein of unknown function UPF0001 | — | — |
| Pseudomonas sp. RS175 | 0.49 | PFR28_03370 | | Aerobic glycerol-3-phosphate dehydrogenase | 0.54 | PFR28_04242 | | Pyridoxal phosphate homeostasis protein | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.49 | AO356_18235 | | glycerol-3-phosphate dehydrogenase | 0.55 | AO356_13425 | | hypothetical protein | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.49 | AO353_04190 | | glycerol-3-phosphate dehydrogenase | 0.53 | AO353_08160 | | hypothetical protein | low | > 101 |
| Bosea sp. OAE506 | 0.49 | ABIE41_RS14410 | | glycerol-3-phosphate dehydrogenase | 0.30 | ABIE41_RS04720 | | YggS family pyridoxal phosphate-dependent enzyme | low | > 77 |
| Pseudomonas fluorescens FW300-N1B4 | 0.48 | Pf1N1B4_769 | | Aerobic glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) | 0.55 | Pf1N1B4_2342 | | Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.48 | Pf6N2E2_5572 | | Aerobic glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) | 0.54 | Pf6N2E2_4601 | | Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC | — | — |
| Rhodopseudomonas palustris CGA009 | 0.48 | TX73_022860 | | glycerol-3-phosphate dehydrogenase | 0.32 | TX73_014475 | | YggS family pyridoxal phosphate-dependent enzyme | low | > 86 |
| Pseudomonas simiae WCS417 | 0.48 | PS417_05565 | | glycerol-3-phosphate dehydrogenase | 0.57 | PS417_26725 | | hypothetical protein | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.48 | PfGW456L13_1732 | | Aerobic glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) | 0.56 | PfGW456L13_1011 | | Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC | — | — |
| Pseudomonas fluorescens SBW25 | 0.48 | PFLU_RS05650 | | glycerol-3-phosphate dehydrogenase | 0.57 | PFLU_RS28370 | | YggS family pyridoxal phosphate-dependent enzyme | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.48 | PFLU_RS05650 | | glycerol-3-phosphate dehydrogenase | 0.57 | PFLU_RS28370 | | YggS family pyridoxal phosphate-dependent enzyme | — | — |
| Agrobacterium fabrum C58 | 0.48 | Atu3897 | | glycerol-3-phosphate dehydrogenase | 0.32 | Atu2747 | | hypothetical protein | low | > 89 |
| Marinobacter adhaerens HP15 | 0.48 | HP15_2168 | | FAD dependent oxidoreductase | 0.50 | HP15_288 | | alanine racemase domain protein | — | — |
| Pseudomonas sp. S08-1 | 0.48 | OH686_20360 | | Aerobic glycerol-3-phosphate dehydrogenase | 0.58 | OH686_10975 | | Pyridoxal phosphate-containing protein YggS | — | — |
| Pseudomonas putida KT2440 | 0.48 | PP_1073 | | glycerol-3-phosphate dehydrogenase (aerobic) | 0.56 | PP_5094 | | putative enzyme with PLP binding domain | — | — |
| Rhizobium sp. OAE497 | 0.48 | ABIE40_RS24730 | | glycerol-3-phosphate dehydrogenase | 0.30 | ABIE40_RS19180 | | YggS family pyridoxal phosphate-dependent enzyme | — | — |
| Pseudomonas stutzeri RCH2 | 0.47 | Psest_2775 | | Glycerol-3-phosphate dehydrogenase | 0.54 | Psest_0284 | | pyridoxal phosphate enzyme, YggS family | low | > 67 |
| Alteromonas macleodii MIT1002 | 0.47 | MIT1002_00200 | | Aerobic glycerol-3-phosphate dehydrogenase | 0.50 | MIT1002_03061 | | pyridoxal phosphate enzyme, YggS family | — | — |
| Dinoroseobacter shibae DFL-12 | 0.46 | Dshi_0630 | | FAD dependent oxidoreductase (RefSeq) | 0.33 | Dshi_0042 | | alanine racemase domain protein (RefSeq) | — | — |
| Dickeya dadantii 3937 | 0.45 | DDA3937_RS19720 | | glycerol-3-phosphate dehydrogenase | 0.53 | DDA3937_RS17300 | | YggS family pyridoxal phosphate-dependent enzyme | — | — |
| Dickeya dianthicola 67-19 | 0.44 | HGI48_RS19815 | | glycerol-3-phosphate dehydrogenase | 0.53 | HGI48_RS17345 | | YggS family pyridoxal phosphate-dependent enzyme | low | > 71 |
| Rahnella sp. WP5 | 0.44 | EX31_RS05000 | | glycerol-3-phosphate dehydrogenase | 0.51 | EX31_RS02685 | | YggS family pyridoxal phosphate-dependent enzyme | low | > 89 |
| Dickeya dianthicola ME23 | 0.44 | DZA65_RS20905 | | glycerol-3-phosphate dehydrogenase | 0.53 | DZA65_RS18435 | | YggS family pyridoxal phosphate-dependent enzyme | low | > 75 |
| Serratia liquefaciens MT49 | 0.44 | IAI46_23915 | | glycerol-3-phosphate dehydrogenase | 0.49 | IAI46_21410 | | YggS family pyridoxal phosphate-dependent enzyme | low | > 86 |
| Pectobacterium carotovorum WPP14 | 0.44 | HER17_RS01510 | | glycerol-3-phosphate dehydrogenase | 0.54 | HER17_RS03810 | | YggS family pyridoxal phosphate-dependent enzyme | — | — |
| Pantoea sp. MT58 | 0.43 | IAI47_01750 | | glycerol-3-phosphate dehydrogenase | 0.52 | IAI47_03595 | | YggS family pyridoxal phosphate-dependent enzyme | low | > 76 |
| Erwinia tracheiphila SCR3 | 0.43 | LU632_RS23020 | glpD | glycerol-3-phosphate dehydrogenase | 0.50 | LU632_RS05460 | | YggS family pyridoxal phosphate-dependent enzyme | — | — |
| Phaeobacter inhibens DSM 17395 | 0.43 | PGA1_c08240 | | aerobic glycerol-3-phosphate dehydrogenase GlpD | 0.28 | PGA1_c33360 | | putative alanine racemase | — | — |
| Escherichia coli BL21 | 0.43 | ECD_03277 | | sn-glycerol-3-phosphate dehydrogenase, aerobic, FAD/NAD(P)-binding | 0.53 | ECD_02781 | | UPF0001 family protein, PLP-binding | low | > 61 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.43 | OHPLBJKB_00278 | | Aerobic glycerol-3-phosphate dehydrogenase | 0.53 | OHPLBJKB_00765 | | Pyridoxal phosphate homeostasis protein | low | > 73 |
| Escherichia coli BW25113 | 0.43 | b3426 | glpD | sn-glycerol-3-phosphate dehydrogenase, aerobic, FAD/NAD(P)-binding (NCBI) | 0.53 | b2951 | yggS | predicted enzyme (NCBI) | low | > 76 |
| Escherichia coli ECOR27 | 0.43 | NOLOHH_08720 | glpD | glycerol-3-phosphate dehydrogenase | 0.53 | NOLOHH_11125 | yggS | pyridoxal phosphate homeostasis protein | low | > 75 |
| Escherichia coli ECRC99 | 0.43 | KEDOAH_11215 | glpD | glycerol-3-phosphate dehydrogenase | 0.53 | KEDOAH_08885 | yggS | pyridoxal phosphate homeostasis protein | — | — |
| Escherichia coli ECRC102 | 0.43 | NIAGMN_14695 | glpD | glycerol-3-phosphate dehydrogenase | 0.53 | NIAGMN_17020 | yggS | pyridoxal phosphate homeostasis protein | — | — |
| Escherichia coli ECRC98 | 0.43 | JDDGAC_20555 | glpD | glycerol-3-phosphate dehydrogenase | 0.53 | JDDGAC_22885 | yggS | pyridoxal phosphate homeostasis protein | low | > 86 |
| Enterobacter asburiae PDN3 | 0.43 | EX28DRAFT_4120 | | Glycerol-3-phosphate dehydrogenase | 0.52 | EX28DRAFT_2989 | | pyridoxal phosphate enzyme, YggS family | low | > 76 |
| Escherichia coli ECRC101 | 0.43 | MCAODC_07455 | glpD | glycerol-3-phosphate dehydrogenase | 0.53 | MCAODC_09775 | yggS | pyridoxal phosphate homeostasis protein | low | > 87 |
| Escherichia coli ECRC62 | 0.43 | BNILDI_02795 | glpD | glycerol-3-phosphate dehydrogenase | 0.53 | BNILDI_09705 | yggS | pyridoxal phosphate homeostasis protein | low | > 75 |
| Escherichia coli ECRC100 | 0.43 | OKFHMN_16925 | glpD | glycerol-3-phosphate dehydrogenase | 0.53 | OKFHMN_19255 | yggS | pyridoxal phosphate homeostasis protein | 0.97 | 1 |
| Escherichia coli ECOR38 | 0.43 | HEPCGN_15745 | glpD | glycerol-3-phosphate dehydrogenase | 0.53 | HEPCGN_18560 | yggS | pyridoxal phosphate homeostasis protein | low | > 87 |
| Escherichia coli Nissle 1917 | 0.42 | ECOLIN_RS19555 | | glycerol-3-phosphate dehydrogenase | 0.53 | ECOLIN_RS16415 | | pyridoxal phosphate homeostasis protein | low | > 55 |
| Escherichia fergusonii Becca | 0.42 | EFB2_00403 | | Aerobic glycerol-3-phosphate dehydrogenase | 0.53 | EFB2_00951 | | Pyridoxal phosphate homeostasis protein | low | > 86 |
| Vibrio cholerae E7946 ATCC 55056 | 0.41 | CSW01_17495 | | glycerol-3-phosphate dehydrogenase | 0.52 | CSW01_02455 | | YggS family pyridoxal phosphate enzyme | low | > 62 |
| Enterobacter sp. TBS_079 | 0.41 | MPMX20_04309 | | Aerobic glycerol-3-phosphate dehydrogenase | 0.51 | MPMX20_03809 | | Pyridoxal phosphate homeostasis protein | low | > 85 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.41 | GFF587 | | Aerobic glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) | 0.55 | GFF3054 | | Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC | low | > 78 |
| Klebsiella michiganensis M5al | 0.41 | BWI76_RS26190 | | glycerol-3-phosphate dehydrogenase | 0.53 | BWI76_RS24100 | | YggS family pyridoxal phosphate enzyme | low | > 92 |
| Desulfovibrio vulgaris Miyazaki F | 0.19 | DvMF_0811 | | FAD dependent oxidoreductase (RefSeq) | 0.33 | DvMF_2208 | | alanine racemase domain protein (RefSeq) | low | > 51 |
| Acidovorax sp. GW101-3H11 | 0.19 | Ac3H11_797 | | Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) | 0.52 | Ac3H11_4474 | | Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC | — | — |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.18 | DVU3132 | | glycerol-3-phosphate dehydrogenase, FAD-dependent (TIGR) | 0.32 | DVU0051 | | conserved hypothetical protein TIGR00044 (TIGR) | low | > 55 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.18 | GFF2815 | | Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) | 0.53 | GFF2722 | | Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC | low | > 90 |
| Cupriavidus basilensis FW507-4G11 | 0.17 | RR42_RS13815 | | FAD-dependent oxidoreductase | 0.57 | RR42_RS17355 | | hypothetical protein | — | — |
| Castellaniella sp019104865 MT123 | 0.17 | ABCV34_RS05860 | | glycerol-3-phosphate dehydrogenase/oxidase | 0.31 | ABCV34_RS02955 | | YggS family pyridoxal phosphate-dependent enzyme | — | — |
| Rhodospirillum rubrum S1H | 0.17 | Rru_A1508 | | FAD dependent oxidoreductase (NCBI) | 0.31 | Rru_A1141 | | Protein of unknown function UPF0001 (NCBI) | low | > 58 |
| Rhodanobacter denitrificans FW104-10B01 | 0.16 | LRK54_RS15405 | | glycerol-3-phosphate dehydrogenase/oxidase | 0.30 | LRK54_RS02905 | | YggS family pyridoxal phosphate-dependent enzyme | low | > 59 |
| Rhodanobacter denitrificans MT42 | 0.16 | LRK55_RS15125 | | glycerol-3-phosphate dehydrogenase/oxidase | 0.31 | LRK55_RS08955 | | YggS family pyridoxal phosphate-dependent enzyme | low | > 63 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.16 | CA264_11355 | | FAD-dependent oxidoreductase | 0.28 | CA264_06410 | | YggS family pyridoxal phosphate enzyme | low | > 74 |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.16 | CA265_RS07875 | | FAD-dependent oxidoreductase | 0.29 | CA265_RS06285 | | YggS family pyridoxal phosphate enzyme | low | > 88 |
Not shown: 0 genomes with orthologs for BPHYT_RS16490 only; 26 genomes with orthologs for BPHYT_RS03495 only