Conservation of cofitness between BPHYT_RS02150 and BPHYT_RS02155 in Burkholderia phytofirmans PsJN

74 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS02150 biotin synthase 1.0 BPHYT_RS02155 dithiobiotin synthetase 0.48 2
Paraburkholderia bryophila 376MFSha3.1 0.91 H281DRAFT_02097 biotin synthase 0.81 H281DRAFT_02096 dethiobiotin synthetase 0.77 2
Paraburkholderia graminis OAS925 0.90 ABIE53_000577 biotin synthase 0.81 ABIE53_000578 dethiobiotin synthetase 0.92 2
Paraburkholderia sabiae LMG 24235 0.85 QEN71_RS01085 biotin synthase BioB 0.63 QEN71_RS01090 dethiobiotin synthase — —
Ralstonia solanacearum PSI07 0.71 RPSI07_RS22850 biotin synthase BioB 0.39 RPSI07_RS16695 dethiobiotin synthase low > 81
Ralstonia solanacearum GMI1000 0.70 RS_RS01305 biotin synthase 0.37 RS_RS07440 ATP-dependent dethiobiotin synthetase BioD — —
Ralstonia solanacearum IBSBF1503 0.70 RALBFv3_RS10465 biotin synthase BioB 0.39 RALBFv3_RS00825 dethiobiotin synthase — —
Ralstonia solanacearum UW163 0.70 UW163_RS03115 biotin synthase BioB 0.39 UW163_RS14160 dethiobiotin synthase — —
Ralstonia sp. UNC404CL21Col 0.69 ABZR87_RS06265 biotin synthase BioB 0.40 ABZR87_RS12345 dethiobiotin synthase low > 80
Cupriavidus basilensis FW507-4G11 0.67 RR42_RS00940 biotin synthase 0.36 RR42_RS00935 dethiobiotin synthetase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.60 GFF3992 Biotin synthase (EC 2.8.1.6) 0.36 GFF3994 Dethiobiotin synthetase (EC 6.3.3.3) — —
Dyella japonica UNC79MFTsu3.2 0.59 ABZR86_RS15840 biotin synthase BioB 0.35 ABZR86_RS12700 dethiobiotin synthase low > 74
Kangiella aquimarina DSM 16071 0.58 B158DRAFT_0864 biotin synthase (EC 2.8.1.6) 0.26 B158DRAFT_0869 dethiobiotin synthase — —
Acidovorax sp. GW101-3H11 0.57 Ac3H11_2272 Biotin synthase (EC 2.8.1.6) 0.42 Ac3H11_3829 Dethiobiotin synthetase (EC 6.3.3.3) low > 79
Vibrio cholerae E7946 ATCC 55056 0.57 CSW01_05645 biotin synthase 0.33 CSW01_05660 dethiobiotin synthase low > 62
Marinobacter adhaerens HP15 0.57 HP15_2486 biotin synthase 0.32 HP15_2482 dethiobiotin synthetase low > 73
Herbaspirillum seropedicae SmR1 0.57 HSERO_RS12235 biotin synthase 0.40 HSERO_RS12255 dethiobiotin synthetase 0.48 1
Pseudomonas putida KT2440 0.57 PP_0362 Biotin synthase 0.33 PP_0366 dethiobiotin synthetase 0.82 5
Pseudomonas stutzeri RCH2 0.57 Psest_0411 biotin synthetase 0.30 Psest_0415 dethiobiotin synthase 0.81 4
Pseudomonas sp. S08-1 0.57 OH686_10355 biotin synthase 0.32 OH686_10335 dethiobiotin synthase 0.96 3
Alteromonas macleodii MIT1002 0.57 MIT1002_01379 Biotin synthase 0.30 MIT1002_01382 ATP-dependent dethiobiotin synthetase BioD 1 0.97 3
Escherichia coli ECRC102 0.57 NIAGMN_04445 bioB biotin synthase BioB 0.31 NIAGMN_04430 bioD dethiobiotin synthase — —
Escherichia coli ECRC100 0.57 OKFHMN_06400 bioB biotin synthase BioB 0.31 OKFHMN_06385 bioD dethiobiotin synthase low > 80
Escherichia coli ECRC99 0.57 KEDOAH_21510 bioB biotin synthase BioB 0.32 KEDOAH_21525 bioD dethiobiotin synthase — —
Escherichia coli ECRC101 0.57 MCAODC_25615 bioB biotin synthase BioB 0.32 MCAODC_25600 bioD dethiobiotin synthase 0.76 23
Escherichia coli ECRC98 0.57 JDDGAC_10035 bioB biotin synthase BioB 0.32 JDDGAC_10020 bioD dethiobiotin synthase low > 86
Escherichia coli ECRC62 0.56 BNILDI_21040 bioB biotin synthase BioB 0.30 BNILDI_21025 bioD dethiobiotin synthase low > 75
Pseudomonas fluorescens SBW25 0.56 PFLU_RS27650 biotin synthase BioB 0.34 PFLU_RS27630 dethiobiotin synthase 0.69 10
Pseudomonas fluorescens SBW25-INTG 0.56 PFLU_RS27650 biotin synthase BioB 0.34 PFLU_RS27630 dethiobiotin synthase 0.80 3
Escherichia coli ECOR38 0.56 HEPCGN_01640 bioB biotin synthase BioB 0.31 HEPCGN_01655 bioD dethiobiotin synthase low > 87
Pseudomonas syringae pv. syringae B728a 0.56 Psyr_4687 biotin synthase 0.34 Psyr_4683 dethiobiotin synthase 0.82 3
Escherichia coli BW25113 0.56 b0775 bioB biotin synthase (NCBI) 0.31 b0778 bioD dethiobiotin synthetase (NCBI) 0.48 7
Escherichia coli HS(pFamp)R (ATCC 700891) 0.56 OHPLBJKB_02938 Biotin synthase 0.31 OHPLBJKB_02935 ATP-dependent dethiobiotin synthetase BioD 1 low > 73
Pseudomonas syringae pv. syringae B728a ΔmexB 0.56 Psyr_4687 biotin synthase 0.34 Psyr_4683 dethiobiotin synthase 0.78 3
Klebsiella michiganensis M5al 0.56 BWI76_RS08760 biotin synthase 0.30 BWI76_RS08775 dethiobiotin synthase 0.41 10
Escherichia coli BL21 0.56 ECD_00742 biotin synthase 0.31 ECD_00745 dethiobiotin synthetase low > 61
Enterobacter sp. TBS_079 0.56 MPMX20_01403 Biotin synthase 0.29 MPMX20_01406 ATP-dependent dethiobiotin synthetase BioD 1 low > 85
Pantoea sp. MT58 0.56 IAI47_13530 biotin synthase BioB 0.31 IAI47_13515 ATP-dependent dethiobiotin synthetase BioD 0.29 5
Escherichia coli ECOR27 0.56 NOLOHH_22770 bioB biotin synthase BioB 0.31 NOLOHH_22755 bioD dethiobiotin synthase low > 75
Xanthomonas campestris pv. campestris strain 8004 0.56 Xcc-8004.505.1 Biotin synthase (EC 2.8.1.6) 0.20 Xcc-8004.4530.1 Dethiobiotin synthetase (EC 6.3.3.3) 0.81 1
Escherichia fergusonii Becca 0.56 EFB2_03330 Biotin synthase 0.31 EFB2_03327 ATP-dependent dethiobiotin synthetase BioD 1 low > 86
Enterobacter asburiae PDN3 0.56 EX28DRAFT_2216 biotin synthase (EC 2.8.1.6) 0.30 EX28DRAFT_2213 dethiobiotin synthase low > 76
Pseudomonas fluorescens FW300-N2E2 0.56 Pf6N2E2_4759 Biotin synthase (EC 2.8.1.6) 0.32 Pf6N2E2_4764 Dethiobiotin synthetase (EC 6.3.3.3) 0.80 3
Pseudomonas fluorescens FW300-N2C3 0.56 AO356_14135 biotin synthase 0.32 AO356_14155 dethiobiotin synthetase 0.70 3
Variovorax sp. SCN45 0.56 GFF937 Biotin synthase (EC 2.8.1.6) 0.43 GFF143 Dethiobiotin synthase BioD (EC 6.3.3.3) low > 127
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.56 GFF671 Biotin synthase (EC 2.8.1.6) 0.30 GFF674 Dethiobiotin synthetase (EC 6.3.3.3) low > 78
Escherichia coli Nissle 1917 0.56 ECOLIN_RS04130 biotin synthase BioB 0.31 ECOLIN_RS04145 dethiobiotin synthase — —
Shewanella amazonensis SB2B 0.56 Sama_1438 biotin synthase (RefSeq) 0.27 Sama_1441 bioD dithiobiotin synthetase (RefSeq) — —
Pseudomonas simiae WCS417 0.56 PS417_26005 biotin synthase 0.34 PS417_25985 dethiobiotin synthetase 0.65 4
Pseudomonas fluorescens FW300-N2E3 0.56 AO353_07525 biotin synthase 0.32 AO353_07505 dethiobiotin synthetase 0.94 3
Pseudomonas fluorescens FW300-N1B4 0.56 Pf1N1B4_2487 Biotin synthase (EC 2.8.1.6) 0.32 Pf1N1B4_2491 Dethiobiotin synthetase (EC 6.3.3.3) 0.84 4
Erwinia tracheiphila SCR3 0.56 LU632_RS09130 bioB biotin synthase BioB 0.30 LU632_RS09145 bioD dethiobiotin synthase — —
Pseudomonas sp. RS175 0.56 PFR28_04103 Biotin synthase 0.33 PFR28_04099 ATP-dependent dethiobiotin synthetase BioD 1 — —
Dechlorosoma suillum PS 0.56 Dsui_1297 biotin synthetase 0.39 Dsui_2884 dethiobiotin synthase 0.77 4
Pseudomonas fluorescens GW456-L13 0.56 PfGW456L13_1147 Biotin synthase (EC 2.8.1.6) 0.33 PfGW456L13_1151 Dethiobiotin synthetase (EC 6.3.3.3) 0.91 3
Dickeya dadantii 3937 0.55 DDA3937_RS08510 biotin synthase BioB 0.30 DDA3937_RS08525 ATP-dependent dethiobiotin synthetase BioD low > 74
Serratia liquefaciens MT49 0.55 IAI46_06525 biotin synthase BioB 0.31 IAI46_06540 ATP-dependent dethiobiotin synthetase BioD low > 86
Rhodanobacter sp. FW510-T8 0.55 OKGIIK_13650 bioB biotin synthase BioB 0.34 OKGIIK_16455 bioD dethiobiotin synthase low > 52
Variovorax sp. OAS795 0.55 ABID97_RS13955 biotin synthase BioB 0.44 ABID97_RS16255 dethiobiotin synthase — —
Dickeya dianthicola ME23 0.55 DZA65_RS08965 biotin synthase BioB 0.31 DZA65_RS08980 ATP-dependent dethiobiotin synthetase BioD 0.53 51
Rahnella sp. WP5 0.55 EX31_RS23695 biotin synthase BioB 0.31 EX31_RS23710 ATP-dependent dethiobiotin synthetase BioD 0.54 30
Dickeya dianthicola 67-19 0.55 HGI48_RS08675 biotin synthase BioB 0.32 HGI48_RS08690 ATP-dependent dethiobiotin synthetase BioD 0.75 58
Rhodanobacter denitrificans FW104-10B01 0.55 LRK54_RS10260 biotin synthase BioB 0.30 LRK54_RS07180 dethiobiotin synthase low > 59
Rhodanobacter denitrificans MT42 0.55 LRK55_RS09900 biotin synthase BioB 0.30 LRK55_RS06915 dethiobiotin synthase low > 63
Shewanella oneidensis MR-1 0.55 SO2740 bioB biotin synthase (NCBI ptt file) 0.35 SO2737 bioD dethiobiotin synthase (NCBI ptt file) — —
Pectobacterium carotovorum WPP14 0.55 HER17_RS13460 biotin synthase BioB 0.30 HER17_RS10730 dethiobiotin synthase low > 75
Shewanella loihica PV-4 0.55 Shew_1719 biotin synthase (RefSeq) 0.32 Shew_1722 dethiobiotin synthase (RefSeq) — —
Shewanella sp. ANA-3 0.54 Shewana3_2519 biotin synthase (RefSeq) 0.35 Shewana3_2516 bioD dithiobiotin synthetase (RefSeq) — —
Sphingomonas koreensis DSMZ 15582 0.54 Ga0059261_3989 biotin synthase (EC 2.8.1.6) 0.17 Ga0059261_3673 dethiobiotin synthase low > 68
Caulobacter crescentus NA1000 0.52 CCNA_03636 biotin synthase 0.19 CCNA_01646 dethiobiotin synthetase low > 66
Caulobacter crescentus NA1000 Δfur 0.52 CCNA_03636 biotin synthase 0.19 CCNA_01646 dethiobiotin synthetase 0.58 34
Rhizobium sp. OAE497 0.49 ABIE40_RS21075 biotin synthase BioB 0.15 ABIE40_RS21065 dethiobiotin synthase low > 107
Pedobacter sp. GW460-11-11-14-LB5 0.44 CA265_RS09475 biotin synthase BioB 0.16 CA265_RS09760 dethiobiotin synthase low > 88
Parabacteroides merdae CL09T00C40 0.22 HMPREF1078_RS15300 biotin synthase BioB 0.17 HMPREF1078_RS15275 dethiobiotin synthase 0.96 2
Desulfovibrio vulgaris Miyazaki F 0.20 DvMF_1001 biotin synthase (RefSeq) 0.14 DvMF_1009 dethiobiotin synthase (RefSeq) low > 51

Not shown: 16 genomes with orthologs for BPHYT_RS02150 only; 3 genomes with orthologs for BPHYT_RS02155 only