Conservation of cofitness between Atu1688 and Atu1141 in Agrobacterium fabrum C58

58 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu1688 indole-3-glycerol-phosphate synthase 1.0 Atu1141 Phosphoribosylglycinamide synthetase 0.85 20
Rhizobium sp. OAE497 0.83 ABIE40_RS09550 indole-3-glycerol phosphate synthase TrpC 0.91 ABIE40_RS06560 phosphoribosylformylglycinamidine cyclo-ligase — —
Sinorhizobium meliloti 1021 0.78 SMc00236 Indole-3-glycerol phosphate synthase 0.85 SMc00615 phosphoribosylaminoimidazole synthetase 0.74 39
Pseudomonas syringae pv. syringae B728a ΔmexB 0.74 Psyr_0756 indole-3-glycerol phosphate synthase 0.53 Psyr_3689 phosphoribosylformylglycinamidine cyclo-ligase — —
Pseudomonas syringae pv. syringae B728a 0.74 Psyr_0756 indole-3-glycerol phosphate synthase 0.53 Psyr_3689 phosphoribosylformylglycinamidine cyclo-ligase — —
Rhodopseudomonas palustris CGA009 0.67 TX73_014985 indole-3-glycerol phosphate synthase TrpC 0.68 TX73_015785 phosphoribosylformylglycinamidine cyclo-ligase — —
Bosea sp. OAE506 0.58 ABIE41_RS17425 indole-3-glycerol phosphate synthase TrpC 0.70 ABIE41_RS17040 phosphoribosylformylglycinamidine cyclo-ligase — —
Phaeobacter inhibens DSM 17395 0.56 PGA1_c16910 indole-3-glycerol phosphate synthase TrpC 0.63 PGA1_c13260 phosphoribosylformylglycinamidine cyclo-ligase PurM — —
Azospirillum sp. SherDot2 0.55 MPMX19_01014 Indole-3-glycerol phosphate synthase 0.61 MPMX19_01304 Phosphoribosylformylglycinamidine cyclo-ligase 0.82 1
Brevundimonas sp. GW460-12-10-14-LB2 0.54 A4249_RS06175 indole-3-glycerol phosphate synthase TrpC 0.59 A4249_RS08210 phosphoribosylformylglycinamidine cyclo-ligase — —
Caulobacter crescentus NA1000 0.54 CCNA_01976 Indole-3-glycerol phosphate synthase 0.58 CCNA_01775 phosphoribosylformylglycinamidine cyclo-ligase low > 66
Caulobacter crescentus NA1000 Δfur 0.54 CCNA_01976 Indole-3-glycerol phosphate synthase 0.58 CCNA_01775 phosphoribosylformylglycinamidine cyclo-ligase low > 67
Dinoroseobacter shibae DFL-12 0.53 Dshi_1800 Indole-3-glycerol-phosphate synthase (RefSeq) 0.60 Dshi_1889 phosphoribosylformylglycinamidine cyclo-ligase (RefSeq) — —
Azospirillum brasilense Sp245 0.53 AZOBR_RS07450 indole-3-glycerol-phosphate synthase 0.61 AZOBR_RS16290 phosphoribosylaminoimidazole synthetase 0.80 24
Rhodanobacter sp. FW510-T8 0.52 OKGIIK_12280 trpC indole-3-glycerol phosphate synthase TrpC 0.44 OKGIIK_02315 purM phosphoribosylformylglycinamidine cyclo-ligase low > 52
Sphingomonas koreensis DSMZ 15582 0.51 Ga0059261_0930 indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.58 Ga0059261_0228 phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) — —
Dyella japonica UNC79MFTsu3.2 0.51 ABZR86_RS12065 indole-3-glycerol phosphate synthase TrpC 0.45 ABZR86_RS19865 phosphoribosylformylglycinamidine cyclo-ligase low > 74
Magnetospirillum magneticum AMB-1 0.50 AMB_RS14415 indole-3-glycerol phosphate synthase TrpC 0.64 AMB_RS14330 phosphoribosylformylglycinamidine cyclo-ligase — —
Lysobacter sp. OAE881 0.50 ABIE51_RS04190 indole-3-glycerol phosphate synthase TrpC 0.47 ABIE51_RS15890 phosphoribosylformylglycinamidine cyclo-ligase low > 62
Xanthomonas campestris pv. campestris strain 8004 0.50 Xcc-8004.622.1 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.47 Xcc-8004.1676.1 Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) 0.70 55
Marinobacter adhaerens HP15 0.50 HP15_3291 indole-3-glycerol phosphate synthase 0.51 HP15_1299 phosphoribosylaminoimidazole synthetase — —
Cupriavidus basilensis FW507-4G11 0.49 RR42_RS18310 indole-3-glycerol-phosphate synthase 0.52 RR42_RS17220 phosphoribosylaminoimidazole synthetase — —
Rhodospirillum rubrum S1H 0.49 Rru_A1897 Indole-3-glycerol-phosphate synthase (NCBI) 0.60 Rru_A2167 Phosphoribosylformylglycinamidine cyclo-ligase (NCBI) low > 58
Pseudomonas simiae WCS417 0.48 PS417_25710 indole-3-glycerol-phosphate synthase 0.53 PS417_20120 phosphoribosylaminoimidazole synthetase — —
Pseudomonas fluorescens SBW25 0.48 PFLU_RS27365 indole-3-glycerol phosphate synthase TrpC 0.53 PFLU_RS22065 phosphoribosylformylglycinamidine cyclo-ligase — —
Pseudomonas fluorescens SBW25-INTG 0.48 PFLU_RS27365 indole-3-glycerol phosphate synthase TrpC 0.53 PFLU_RS22065 phosphoribosylformylglycinamidine cyclo-ligase — —
Pseudomonas fluorescens FW300-N2E3 0.47 AO353_07210 indole-3-glycerol-phosphate synthase 0.52 AO353_02680 phosphoribosylaminoimidazole synthetase — —
Pseudomonas stutzeri RCH2 0.47 Psest_3647 Indole-3-glycerol phosphate synthase 0.52 Psest_1474 phosphoribosylaminoimidazole synthetase 0.46 52
Ralstonia solanacearum GMI1000 0.47 RS_RS14450 Indole-3-glycerol phosphate synthase 1 0.49 RS_RS13145 phosphoribosylformylglycinamidine cyclo-ligase — —
Pseudomonas sp. S08-1 0.47 OH686_15140 Indole-3-glycerol phosphate synthase 0.52 OH686_18995 Phosphoribosylformylglycinamidine cyclo-ligase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.47 GFF3111 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.50 GFF3433 Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) — —
Ralstonia solanacearum PSI07 0.47 RPSI07_RS10735 indole-3-glycerol phosphate synthase TrpC 0.50 RPSI07_RS12020 phosphoribosylformylglycinamidine cyclo-ligase — —
Pseudomonas fluorescens GW456-L13 0.47 PfGW456L13_1222 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.53 PfGW456L13_4252 Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) — —
Rhodanobacter denitrificans FW104-10B01 0.47 LRK54_RS11570 indole-3-glycerol phosphate synthase TrpC 0.45 LRK54_RS12945 phosphoribosylformylglycinamidine cyclo-ligase 0.58 12
Pseudomonas fluorescens FW300-N1B4 0.47 Pf1N1B4_2549 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.52 Pf1N1B4_3698 Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) — —
Ralstonia sp. UNC404CL21Col 0.47 ABZR87_RS02160 indole-3-glycerol phosphate synthase TrpC 0.51 ABZR87_RS00915 phosphoribosylformylglycinamidine cyclo-ligase — —
Variovorax sp. OAS795 0.47 ABID97_RS05280 indole-3-glycerol phosphate synthase TrpC 0.50 ABID97_RS08700 phosphoribosylformylglycinamidine cyclo-ligase — —
Acidovorax sp. GW101-3H11 0.47 Ac3H11_772 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.51 Ac3H11_1318 Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) — —
Pseudomonas fluorescens FW300-N2C3 0.46 AO356_14440 indole-3-glycerol-phosphate synthase 0.53 AO356_19090 phosphoribosylaminoimidazole synthetase 0.70 47
Pseudomonas fluorescens FW300-N2E2 0.46 Pf6N2E2_4826 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.53 Pf6N2E2_5729 Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) — —
Pseudomonas sp. RS175 0.46 PFR28_04043 Indole-3-glycerol phosphate synthase 0.52 PFR28_03217 Phosphoribosylformylglycinamidine cyclo-ligase — —
Dechlorosoma suillum PS 0.46 Dsui_0168 Indole-3-glycerol phosphate synthase 0.53 Dsui_1519 phosphoribosylaminoimidazole synthetase — —
Rhodanobacter denitrificans MT42 0.46 LRK55_RS11300 indole-3-glycerol phosphate synthase TrpC 0.45 LRK55_RS12645 phosphoribosylformylglycinamidine cyclo-ligase low > 63
Ralstonia solanacearum IBSBF1503 0.46 RALBFv3_RS06505 indole-3-glycerol phosphate synthase TrpC 0.49 RALBFv3_RS05280 phosphoribosylformylglycinamidine cyclo-ligase — —
Ralstonia solanacearum UW163 0.46 UW163_RS07120 indole-3-glycerol phosphate synthase TrpC 0.49 UW163_RS08345 phosphoribosylformylglycinamidine cyclo-ligase — —
Castellaniella sp019104865 MT123 0.46 ABCV34_RS10310 indole-3-glycerol phosphate synthase TrpC 0.52 ABCV34_RS08795 phosphoribosylformylglycinamidine cyclo-ligase — —
Herbaspirillum seropedicae SmR1 0.46 HSERO_RS19450 indole-3-glycerol-phosphate synthase 0.52 HSERO_RS03165 phosphoribosylaminoimidazole synthetase — —
Variovorax sp. SCN45 0.45 GFF5890 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.50 GFF3941 Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) — —
Pseudomonas putida KT2440 0.45 PP_0422 Indole-3-glycerol phosphate synthase 0.51 PP_1665 Phosphoribosylformylglycinamidine cyclo-ligase — —
Acinetobacter radioresistens SK82 0.45 MPMX26_00983 Indole-3-glycerol phosphate synthase 0.48 MPMX26_02206 Phosphoribosylformylglycinamidine cyclo-ligase low > 36
Paraburkholderia sabiae LMG 24235 0.44 QEN71_RS27565 indole-3-glycerol phosphate synthase TrpC 0.50 QEN71_RS26445 phosphoribosylformylglycinamidine cyclo-ligase 0.90 16
Paraburkholderia graminis OAS925 0.43 ABIE53_003643 indole-3-glycerol phosphate synthase 0.48 ABIE53_000874 phosphoribosylformylglycinamidine cyclo-ligase — —
Paraburkholderia bryophila 376MFSha3.1 0.42 H281DRAFT_05712 indole-3-glycerol phosphate synthase 0.48 H281DRAFT_04710 phosphoribosylformylglycinamidine cyclo-ligase 0.45 43
Burkholderia phytofirmans PsJN 0.41 BPHYT_RS17405 indole-3-glycerol phosphate synthase 0.48 BPHYT_RS03640 phosphoribosylformylglycinamidine cyclo-ligase 0.47 92
Synechococcus elongatus PCC 7942 0.33 Synpcc7942_1197 trpC indole-3-glycerol-phosphate synthase 0.50 Synpcc7942_0851 purM phosphoribosylaminoimidazole synthetase — —
Mycobacterium tuberculosis H37Rv 0.29 Rv1611 Probable indole-3-glycerol phosphate synthase TrpC 0.37 Rv0809 Probable phosphoribosylformylglycinamidine CYCLO-ligase PurM (AIRS) (phosphoribosyl-aminoimidazole synthetase) (air synthase) — —
Methanococcus maripaludis JJ 0.20 MMJJ_RS09165 indole-3-glycerol phosphate synthase TrpC 0.28 MMJJ_RS07900 phosphoribosylformylglycinamidine cyclo-ligase — —
Methanococcus maripaludis S2 0.20 MMP_RS05215 indole-3-glycerol phosphate synthase TrpC 0.29 MMP_RS06450 phosphoribosylformylglycinamidine cyclo-ligase — —
Desulfovibrio vulgaris Hildenborough JW710 0.19 DVU0468 trpC indole-3-glycerol phosphate synthase (TIGR) 0.46 DVU1406 purM phosphoribosylformylglycinamidine cyclo-ligase (TIGR) — —

Not shown: 9 genomes with orthologs for Atu1688 only; 35 genomes with orthologs for Atu1141 only