Conservation of cofitness between Atu1359 and Atu0041 in Agrobacterium fabrum C58

53 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu1359 dnaK deletion suppressor protein 1.0 Atu0041 glutamine amidotransferase 0.59 8
Rhizobium sp. OAE497 0.95 ABIE40_RS10345 RNA polymerase-binding protein DksA 0.87 ABIE40_RS19450 imidazole glycerol phosphate synthase subunit HisH 0.59 28
Sinorhizobium meliloti 1021 0.92 SMc00469 DnaK suppressor protein 0.80 SMc02572 imidazole glycerol phosphate synthase subunit HisH
Rhodopseudomonas palustris CGA009 0.75 TX73_020255 RNA polymerase-binding protein DksA 0.61 TX73_001615 imidazole glycerol phosphate synthase subunit HisH
Bosea sp. OAE506 0.74 ABIE41_RS13460 RNA polymerase-binding protein DksA 0.63 ABIE41_RS03955 imidazole glycerol phosphate synthase subunit HisH 0.46 42
Azospirillum brasilense Sp245 0.66 AZOBR_RS11245 molecular chaperone DnaK 0.55 AZOBR_RS01670 imidazole glycerol phosphate synthase
Dinoroseobacter shibae DFL-12 0.65 Dshi_1884 transcriptional regulator, TraR/DksA family (RefSeq) 0.55 Dshi_0795 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit (RefSeq)
Caulobacter crescentus NA1000 0.65 CCNA_02663 DnaK suppressor protein DksA 0.51 CCNA_03851 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit low > 66
Caulobacter crescentus NA1000 Δfur 0.65 CCNA_02663 DnaK suppressor protein DksA 0.51 CCNA_03851 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit low > 67
Magnetospirillum magneticum AMB-1 0.64 AMB_RS19350 RNA polymerase-binding protein DksA 0.53 AMB_RS22935 imidazole glycerol phosphate synthase subunit HisH
Phaeobacter inhibens DSM 17395 0.64 PGA1_c11040 dnaK suppressor protein DksA 0.53 PGA1_c09320 imidazole glycerol phosphate synthase subunit HisH
Azospirillum sp. SherDot2 0.63 MPMX19_01492 RNA polymerase-binding transcription factor DksA 0.60 MPMX19_02545 Imidazole glycerol phosphate synthase subunit HisH
Rhodospirillum rubrum S1H 0.62 Rru_A2847 Transcriptional regulators, TraR/DksA family (NCBI) 0.55 Rru_A3596 Imidazole glycerol phosphate synthase, glutamine amidotransferase subunit (NCBI) low > 58
Sphingomonas koreensis DSMZ 15582 0.60 Ga0059261_0274 transcriptional regulator, TraR/DksA family 0.43 Ga0059261_1046 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 0.82 65
Brevundimonas sp. GW460-12-10-14-LB2 0.60 A4249_RS08530 RNA polymerase-binding protein DksA 0.28 A4249_RS10705 imidazole glycerol phosphate synthase subunit HisH low > 48
Ralstonia solanacearum IBSBF1503 0.50 RALBFv3_RS09645 RNA polymerase-binding protein DksA 0.38 RALBFv3_RS06825 imidazole glycerol phosphate synthase subunit HisH
Ralstonia solanacearum UW163 0.50 UW163_RS03935 RNA polymerase-binding protein DksA 0.38 UW163_RS06790 imidazole glycerol phosphate synthase subunit HisH
Ralstonia solanacearum GMI1000 0.48 RS_RS00230 RNA polymerase-binding protein DksA 0.37 RS_RS14770 imidazole glycerol phosphate synthase subunit HisH
Paraburkholderia bryophila 376MFSha3.1 0.47 H281DRAFT_02205 transcriptional regulator, TraR/DksA family 0.36 H281DRAFT_05657 imidazole glycerol phosphate synthase subunit hisH
Burkholderia phytofirmans PsJN 0.47 BPHYT_RS01640 molecular chaperone DnaK 0.35 BPHYT_RS17690 imidazole glycerol phosphate synthase
Ralstonia solanacearum PSI07 0.47 RPSI07_RS23720 RNA polymerase-binding protein DksA 0.37 RPSI07_RS10410 imidazole glycerol phosphate synthase subunit HisH
Ralstonia sp. UNC404CL21Col 0.46 ABZR87_RS05100 RNA polymerase-binding protein DksA 0.36 ABZR87_RS02480 imidazole glycerol phosphate synthase subunit HisH low > 80
Herbaspirillum seropedicae SmR1 0.46 HSERO_RS00840 molecular chaperone DnaK 0.34 HSERO_RS20325 IGP synthase, amidotransferase subunit (EC 4.3.2.10) (from data)
Paraburkholderia graminis OAS925 0.46 ABIE53_000423 DnaK suppressor protein 0.36 ABIE53_003697 glutamine amidotransferase
Cupriavidus basilensis FW507-4G11 0.46 RR42_RS01030 molecular chaperone DnaK 0.36 RR42_RS18895 imidazole glycerol phosphate synthase
Paraburkholderia sabiae LMG 24235 0.46 QEN71_RS00340 RNA polymerase-binding protein DksA 0.36 QEN71_RS27845 imidazole glycerol phosphate synthase subunit HisH
Pseudomonas sp. RS175 0.45 PFR28_03714 RNA polymerase-binding transcription factor DksA 0.30 PFR28_04930 Imidazole glycerol phosphate synthase subunit HisH low > 88
Castellaniella sp019104865 MT123 0.45 ABCV34_RS13420 RNA polymerase-binding protein DksA 0.31 ABCV34_RS11240 imidazole glycerol phosphate synthase subunit HisH
Pseudomonas fluorescens FW300-N2C3 0.44 AO356_16095 molecular chaperone DnaK 0.30 AO356_03385 imidazole glycerol phosphate synthase subunit HisH low > 104
Pseudomonas fluorescens SBW25 0.44 PFLU_RS25715 RNA polymerase-binding protein DksA 0.28 PFLU_RS01610 imidazole glycerol phosphate synthase subunit HisH low > 109
Pseudomonas fluorescens SBW25-INTG 0.44 PFLU_RS25715 RNA polymerase-binding protein DksA 0.28 PFLU_RS01610 imidazole glycerol phosphate synthase subunit HisH low > 109
Kangiella aquimarina DSM 16071 0.44 B158DRAFT_0056 transcriptional regulator, TraR/DksA family 0.15 B158DRAFT_2290 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit low > 40
Pseudomonas stutzeri RCH2 0.44 Psest_1003 RNA polymerase-binding protein DksA 0.29 Psest_0153 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit
Pseudomonas fluorescens FW300-N2E3 0.44 AO353_14420 molecular chaperone DnaK 0.29 AO353_12075 imidazole glycerol phosphate synthase subunit HisH low > 101
Pseudomonas syringae pv. syringae B728a ΔmexB 0.43 Psyr_0835 transcriptional regulator, TraR/DksA family 0.28 Psyr_4896 imidazole glycerol phosphate synthase subunit hisH low > 86
Pseudomonas simiae WCS417 0.43 PS417_23875 molecular chaperone DnaK 0.28 PS417_01565 imidazole glycerol phosphate synthase
Pseudomonas fluorescens FW300-N1B4 0.43 Pf1N1B4_2862 C4-type zinc finger protein, DksA/TraR family 0.29 Pf1N1B4_1626 Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-)
Pseudomonas syringae pv. syringae B728a 0.43 Psyr_0835 transcriptional regulator, TraR/DksA family 0.28 Psyr_4896 imidazole glycerol phosphate synthase subunit hisH low > 86
Pseudomonas sp. S08-1 0.42 OH686_17280 RNA polymerase-binding protein DksA 0.28 OH686_14580 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit
Dechlorosoma suillum PS 0.42 Dsui_2717 RNA polymerase-binding protein DksA 0.32 Dsui_1416 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit
Pseudomonas fluorescens GW456-L13 0.42 PfGW456L13_1528 C4-type zinc finger protein, DksA/TraR family 0.29 PfGW456L13_361 Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) low > 87
Pseudomonas fluorescens FW300-N2E2 0.42 Pf6N2E2_5160 C4-type zinc finger protein, DksA/TraR family 0.29 Pf6N2E2_3841 Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) 0.33 44
Pseudomonas putida KT2440 0.42 PP_4693 RNA polymerase-binding transcription factor DksA 0.28 PP_0290 Imidazole glycerol phosphate synthase subunit HisH low > 96
Shewanella amazonensis SB2B 0.41 Sama_0780 TraR/DksA family transcriptional regulator (RefSeq) 0.25 Sama_1945 hisH imidazole glycerol phosphate synthase subunit HisH (RefSeq) 0.78 36
Shewanella sp. ANA-3 0.41 Shewana3_3404 TraR/DksA family transcriptional regulator (RefSeq) 0.29 Shewana3_1850 hisH imidazole glycerol phosphate synthase subunit HisH (RefSeq) 0.48 40
Marinobacter adhaerens HP15 0.41 HP15_332 transcriptional regulator, TraR/DksA family 0.34 HP15_3011 imidazole glycerol phosphate synthase subunit HisH
Klebsiella michiganensis M5al 0.41 BWI76_RS05015 transcriptional regulator 0.30 BWI76_RS18940 imidazole glycerol phosphate synthase subunit HisH 0.56 6
Shewanella oneidensis MR-1 0.41 SO0874 dksA DnaK suppressor protein (NCBI ptt file) 0.28 SO2070 hisH amidotransferase HisH (NCBI ptt file)
Pantoea sp. MT58 0.41 IAI47_15635 RNA polymerase-binding protein DksA 0.27 IAI47_07075 imidazole glycerol phosphate synthase subunit HisH 0.48 21
Shewanella loihica PV-4 0.41 Shew_3129 TraR/DksA family transcriptional regulator (RefSeq) 0.27 Shew_2201 hisH imidazole glycerol phosphate synthase subunit HisH (RefSeq)
Alteromonas macleodii MIT1002 0.40 MIT1002_03690 DnaK suppressor protein 0.25 MIT1002_02636 Imidazole glycerol phosphate synthase subunit HisH 0.79 38
Vibrio cholerae E7946 ATCC 55056 0.38 CSW01_03155 RNA polymerase-binding transcription factor DksA 0.29 CSW01_05765 imidazole glycerol phosphate synthase subunit HisH low > 62
Desulfovibrio vulgaris Hildenborough JW710 0.36 DVU2150 dksA dnaK suppressor protein, putative (TIGR) 0.23 DVU0285 hisH IGP synthase, amidotransferase subunit (EC 4.3.2.10) (from data) 0.58 5
Desulfovibrio vulgaris Miyazaki F 0.35 DvMF_0008 transcriptional regulator, TraR/DksA family (RefSeq) 0.23 DvMF_2305 hisH IGP synthase, amidotransferase subunit (EC 4.3.2.10) (from data)

Not shown: 0 genomes with orthologs for Atu1359 only; 49 genomes with orthologs for Atu0041 only