Conservation of cofitness between AO356_07100 and AO356_16450 in Pseudomonas fluorescens FW300-N2C3

77 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens FW300-N2C3 1.0 AO356_07100 carbon-nitrogen hydrolase 1.0 AO356_16450 GTP-binding protein 0.36 7
Pseudomonas sp. RS175 0.97 PFR28_00160 Deaminated glutathione amidase 0.98 PFR28_03664 Ribosome-binding ATPase YchF low > 88
Pseudomonas fluorescens GW456-L13 0.91 PfGW456L13_5027 FIG003879: Predicted amidohydrolase / Omega amidase (Nit2 homolog) 0.98 PfGW456L13_1574 GTP-binding and nucleic acid-binding protein YchF 0.32 32
Pseudomonas fluorescens FW300-N1B4 0.90 Pf1N1B4_1093 FIG003879: Predicted amidohydrolase / Omega amidase (Nit2 homolog) 0.96 Pf1N1B4_2912 GTP-binding and nucleic acid-binding protein YchF low > 87
Pseudomonas fluorescens SBW25-INTG 0.90 PFLU_RS04335 carbon-nitrogen hydrolase family protein 0.96 PFLU_RS03610 redox-regulated ATPase YchF low > 109
Pseudomonas fluorescens SBW25 0.90 PFLU_RS04335 carbon-nitrogen hydrolase family protein 0.96 PFLU_RS03610 redox-regulated ATPase YchF low > 109
Pseudomonas fluorescens FW300-N2E3 0.89 AO353_05220 carbon-nitrogen hydrolase 0.97 AO353_14740 GTP-binding protein 0.39 26
Pseudomonas simiae WCS417 0.88 PS417_04280 carbon-nitrogen hydrolase 0.96 PS417_03560 GTP-binding protein low > 88
Pseudomonas syringae pv. syringae B728a 0.83 Psyr_4157 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 0.97 Psyr_0941 Conserved hypothetical protein 92 low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.83 Psyr_4157 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 0.97 Psyr_0941 Conserved hypothetical protein 92 low > 86
Pseudomonas putida KT2440 0.82 PP_0939 Carbon-nitrogen hydrolase family protein 0.94 PP_0719 ribosome-associated potassium-dependent informational ATP/GTPase low > 96
Pseudomonas sp. S08-1 0.78 OH686_08585 Uncharacterized subgroup of the nitrilase superfamily 0.92 OH686_07965 GTP-binding and nucleic acid-binding protein YchF low > 80
Pseudomonas stutzeri RCH2 0.69 Psest_3321 Predicted amidohydrolase 0.91 Psest_1103 GTP-binding protein YchF low > 67
Marinobacter adhaerens HP15 0.45 HP15_2449 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 0.76 HP15_704 translation-associated GTPase low > 73
Serratia liquefaciens MT49 0.43 IAI46_22690 carbon-nitrogen hydrolase family protein 0.68 IAI46_10240 redox-regulated ATPase YchF — —
Variovorax sp. OAS795 0.42 ABID97_RS02000 carbon-nitrogen hydrolase family protein 0.64 ABID97_RS24750 redox-regulated ATPase YchF low > 91
Variovorax sp. SCN45 0.41 GFF5445 FIG003879: Uncharacterized subgroup of the nitrilase superfamily 0.64 GFF2141 GTP-binding and nucleic acid-binding protein YchF low > 127
Vibrio cholerae E7946 ATCC 55056 0.41 CSW01_02215 carbon-nitrogen hydrolase family protein 0.69 CSW01_10875 redox-regulated ATPase YchF low > 62
Cupriavidus basilensis FW507-4G11 0.40 RR42_RS05880 acyltransferase 0.66 RR42_RS18365 GTP-binding protein low > 128
Paraburkholderia sabiae LMG 24235 0.40 QEN71_RS26550 carbon-nitrogen hydrolase family protein 0.67 QEN71_RS27600 redox-regulated ATPase YchF low > 153
Paraburkholderia bryophila 376MFSha3.1 0.40 H281DRAFT_04689 nitrilase 0.67 H281DRAFT_05705 hypothetical protein low > 103
Shewanella sp. ANA-3 0.40 Shewana3_3642 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (RefSeq) 0.73 Shewana3_1012 GTP-dependent nucleic acid-binding protein EngD (RefSeq) low > 73
Paraburkholderia graminis OAS925 0.39 ABIE53_000852 putative amidohydrolase 0.67 ABIE53_003650 GTP-binding protein YchF low > 113
Shewanella oneidensis MR-1 0.39 SO4092 hydrolase, carbon-nitrogen family (NCBI ptt file) 0.73 SO1185 conserved hypothetical protein TIGR00092 (NCBI ptt file) low > 76
Burkholderia phytofirmans PsJN 0.39 BPHYT_RS03545 apolipoprotein acyltransferase 0.68 BPHYT_RS17445 GTP-binding protein YchF low > 109
Hydrogenophaga sp. GW460-11-11-14-LB1 0.39 GFF2535 FIG003879: Predicted amidohydrolase 0.65 GFF630 GTP-binding and nucleic acid-binding protein YchF low > 90
Shewanella amazonensis SB2B 0.38 Sama_0473 carbon-nitrogen family hydrolase (RefSeq) 0.71 Sama_2571 GTP-dependent nucleic acid-binding protein EngD (RefSeq) low > 62
Acidovorax sp. GW101-3H11 0.38 Ac3H11_1207 FIG003879: Predicted amidohydrolase 0.64 Ac3H11_4001 GTP-binding and nucleic acid-binding protein YchF — —
Ralstonia solanacearum GMI1000 0.38 RS_RS13310 carbon-nitrogen hydrolase family protein 0.66 RS_RS14520 redox-regulated ATPase YchF low > 80
Herbaspirillum seropedicae SmR1 0.38 HSERO_RS07150 apolipoprotein acyltransferase 0.63 HSERO_RS20405 GTP-binding protein YchF low > 78
Ralstonia solanacearum PSI07 0.38 RPSI07_RS11855 carbon-nitrogen hydrolase family protein 0.65 RPSI07_RS10660 redox-regulated ATPase YchF low > 81
Ralstonia sp. UNC404CL21Col 0.38 ABZR87_RS01100 carbon-nitrogen hydrolase family protein 0.66 ABZR87_RS02220 redox-regulated ATPase YchF low > 80
Alteromonas macleodii MIT1002 0.38 MIT1002_00226 (R)-stereoselective amidase 0.69 MIT1002_01504 Ribosome-binding ATPase YchF low > 70
Ralstonia solanacearum UW163 0.38 UW163_RS08175 carbon-nitrogen hydrolase family protein 0.65 UW163_RS07055 redox-regulated ATPase YchF — —
Ralstonia solanacearum IBSBF1503 0.38 RALBFv3_RS05450 carbon-nitrogen hydrolase family protein 0.65 RALBFv3_RS06570 redox-regulated ATPase YchF low > 76
Castellaniella sp019104865 MT123 0.37 ABCV34_RS02585 carbon-nitrogen hydrolase family protein 0.66 ABCV34_RS09215 redox-regulated ATPase YchF — —
Shewanella loihica PV-4 0.37 Shew_0409 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (RefSeq) 0.70 Shew_2919 translation-associated GTPase (RefSeq) low > 60
Rhodospirillum rubrum S1H 0.36 Rru_A0739 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (NCBI) 0.56 Rru_A3748 hypothetical protein (NCBI) low > 58
Dechlorosoma suillum PS 0.36 Dsui_3402 putative amidohydrolase 0.64 Dsui_1039 GTP-binding protein YchF — —
Acinetobacter radioresistens SK82 0.36 MPMX26_00580 Deaminated glutathione amidase 0.77 MPMX26_01861 Ribosome-binding ATPase YchF low > 36
Dinoroseobacter shibae DFL-12 0.36 Dshi_3506 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (RefSeq) 0.58 Dshi_0954 GTP-binding protein YchF (RefSeq) — —
Sphingomonas koreensis DSMZ 15582 0.35 Ga0059261_3603 Predicted amidohydrolase 0.54 Ga0059261_3227 GTP-binding protein YchF low > 68
Phaeobacter inhibens DSM 17395 0.35 PGA1_c34700 putative carbon-nitrogen hydrolase 0.57 PGA1_c04950 GTP-dependent nucleic acid-binding protein EngD low > 62
Kangiella aquimarina DSM 16071 0.34 B158DRAFT_2071 Predicted amidohydrolase 0.70 B158DRAFT_2052 GTP-binding protein YchF low > 40
Azospirillum brasilense Sp245 0.34 AZOBR_RS02920 amidohydrolase 0.58 AZOBR_RS30645 GTP-binding protein YchF — —
Rhodopseudomonas palustris CGA009 0.34 TX73_003100 carbon-nitrogen hydrolase family protein 0.57 TX73_022570 redox-regulated ATPase YchF low > 86
Brevundimonas sp. GW460-12-10-14-LB2 0.34 A4249_RS13565 carbon-nitrogen hydrolase family protein 0.54 A4249_RS09035 redox-regulated ATPase YchF low > 48
Azospirillum sp. SherDot2 0.33 MPMX19_02429 Deaminated glutathione amidase 0.58 MPMX19_01641 Ribosome-binding ATPase YchF — —
Synechococcus elongatus PCC 7942 0.32 Synpcc7942_2358 nitrilase-like 0.52 Synpcc7942_0554 ychF translation-associated GTPase low > 38
Sinorhizobium meliloti 1021 0.31 SMc02442 hydrolase 0.58 SMc02695 GTP-dependent nucleic acid-binding protein EngD low > 103
Magnetospirillum magneticum AMB-1 0.31 AMB_RS08115 carbon-nitrogen hydrolase family protein 0.58 AMB_RS21985 redox-regulated ATPase YchF — —
Caulobacter crescentus NA1000 Δfur 0.31 CCNA_00871 carbon-nitrogen hydrolase family protein 0.54 CCNA_00512 GTP-binding protein, probable translation factor low > 67
Caulobacter crescentus NA1000 0.31 CCNA_00871 carbon-nitrogen hydrolase family protein 0.54 CCNA_00512 GTP-binding protein, probable translation factor low > 66
Rhizobium sp. OAE497 0.31 ABIE40_RS17345 carbon-nitrogen hydrolase family protein 0.59 ABIE40_RS13100 redox-regulated ATPase YchF — —
Agrobacterium fabrum C58 0.30 Atu3510 amidohydrolase 0.58 Atu2233 GTP-binding protein — —
Dickeya dianthicola 67-19 0.21 HGI48_RS19475 deaminated glutathione amidase 0.70 HGI48_RS10975 redox-regulated ATPase YchF low > 71
Erwinia tracheiphila SCR3 0.20 LU632_RS16420 deaminated glutathione amidase 0.71 LU632_RS13950 ychF redox-regulated ATPase YchF low > 74
Dickeya dianthicola ME23 0.19 DZA65_RS06520 deaminated glutathione amidase 0.70 DZA65_RS11435 redox-regulated ATPase YchF low > 75
Pantoea sp. MT58 0.19 IAI47_14065 deaminated glutathione amidase 0.71 IAI47_11310 redox-regulated ATPase YchF low > 76
Klebsiella michiganensis M5al 0.19 BWI76_RS07990 carbon-nitrogen hydrolase 0.69 BWI76_RS17485 GTP-binding protein YchF — —
Escherichia coli ECRC62 0.19 BNILDI_21795 tatE deaminated glutathione amidase 0.71 BNILDI_18805 ychF redox-regulated ATPase YchF low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.19 OHPLBJKB_03080 Deaminated glutathione amidase 0.71 OHPLBJKB_02484 Ribosome-binding ATPase YchF low > 73
Escherichia coli BL21 0.19 ECD_00595 putative NAD(P)-binding amidase-type enzyme YbeM (C-N hydrolase family) 0.71 ECD_01178 catalase inhibitor protein; ATPase, K+-dependent, ribosome-associated — —
Escherichia coli ECRC98 0.19 JDDGAC_11055 tatE deaminated glutathione amidase 0.71 JDDGAC_06165 ychF redox-regulated ATPase YchF low > 86
Escherichia coli ECRC100 0.19 OKFHMN_07410 tatE deaminated glutathione amidase 0.71 OKFHMN_28410 ychF redox-regulated ATPase YchF — —
Escherichia coli ECOR27 0.19 NOLOHH_23785 tatE deaminated glutathione amidase 0.71 NOLOHH_20650 ychF redox-regulated ATPase YchF — —
Escherichia coli ECRC101 0.19 MCAODC_26625 tatE deaminated glutathione amidase 0.71 MCAODC_21850 ychF redox-regulated ATPase YchF low > 87
Escherichia coli ECRC99 0.19 KEDOAH_20560 tatE deaminated glutathione amidase 0.71 KEDOAH_25405 ychF redox-regulated ATPase YchF — —
Escherichia coli ECRC102 0.19 NIAGMN_05465 tatE deaminated glutathione amidase 0.71 NIAGMN_27825 ychF redox-regulated ATPase YchF — —
Dickeya dadantii 3937 0.19 DDA3937_RS06130 deaminated glutathione amidase 0.70 DDA3937_RS11035 redox-regulated ATPase YchF low > 74
Escherichia fergusonii Becca 0.19 EFB2_03466 Deaminated glutathione amidase 0.71 EFB2_02724 Ribosome-binding ATPase YchF low > 86
Escherichia coli Nissle 1917 0.18 ECOLIN_RS03410 deaminated glutathione amidase 0.71 ECOLIN_RS07280 redox-regulated ATPase YchF — —
Escherichia coli ECOR38 0.18 HEPCGN_00865 tatE deaminated glutathione amidase 0.71 HEPCGN_24875 ychF redox-regulated ATPase YchF low > 87
Enterobacter asburiae PDN3 0.18 EX28DRAFT_2337 Predicted amidohydrolase 0.69 EX28DRAFT_0821 GTP-binding protein YchF — —
Enterobacter sp. TBS_079 0.17 MPMX20_01285 Deaminated glutathione amidase 0.69 MPMX20_02645 Ribosome-binding ATPase YchF low > 85
Pectobacterium carotovorum WPP14 0.16 HER17_RS17575 deaminated glutathione amidase 0.70 HER17_RS10445 redox-regulated ATPase YchF low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.16 GFF4538 Aliphatic amidase AmiE (EC 3.5.1.4) 0.71 GFF2784 GTP-binding and nucleic acid-binding protein YchF low > 78
Mycobacterium tuberculosis H37Rv 0.15 Rv0480c Possible amidohydrolase 0.41 Rv1112 Probable GTP binding protein low > 58

Not shown: 1 genomes with orthologs for AO356_07100 only; 25 genomes with orthologs for AO356_16450 only