| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Magnetospirillum magneticum AMB-1 | 1.0 | AMB_RS00075 | | P-II family nitrogen regulator | 1.0 | AMB_RS19255 | | excinuclease ABC subunit UvrB | 0.85 | 1 |
| Azospirillum sp. SherDot2 | 0.85 | MPMX19_05521 | | Nitrogen regulatory protein P-II 2 | 0.73 | MPMX19_01038 | | UvrABC system protein B | 0.36 | 34 |
| Azospirillum brasilense Sp245 | 0.83 | AZOBR_RS02290 | | nitrogen regulatory protein P-II 1 | 0.73 | AZOBR_RS16420 | | excinuclease ABC subunit B | low | > 97 |
| Acidovorax sp. GW101-3H11 | 0.82 | Ac3H11_3402 | | Nitrogen regulatory protein P-II | 0.55 | Ac3H11_4114 | | Excinuclease ABC subunit B | low | > 79 |
| Variovorax sp. OAS795 | 0.80 | ABID97_RS03630 | | P-II family nitrogen regulator | 0.54 | ABID97_RS13995 | | excinuclease ABC subunit UvrB | low | > 91 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.80 | GFF1923 | | Nitrogen regulatory protein P-II | 0.54 | GFF4962 | | Excinuclease ABC subunit B | low | > 90 |
| Variovorax sp. SCN45 | 0.80 | GFF5120 | | Nitrogen regulatory protein P-II, GlnK | 0.54 | GFF945 | | Excinuclease ABC subunit B | low | > 127 |
| Ralstonia sp. UNC404CL21Col | 0.80 | ABZR87_RS06695 | | P-II family nitrogen regulator | 0.56 | ABZR87_RS09940 | | excinuclease ABC subunit UvrB | low | > 80 |
| Rhodanobacter sp. FW510-T8 | 0.79 | OKGIIK_13340 | glnK | P-II family nitrogen regulator | 0.54 | OKGIIK_03100 | uvrB | excinuclease ABC subunit UvrB | low | > 52 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.79 | H281DRAFT_02013 | | nitrogen regulatory protein P-II family | 0.55 | H281DRAFT_04973 | | Excinuclease ABC subunit B | low | > 103 |
| Paraburkholderia sabiae LMG 24235 | 0.79 | QEN71_RS01400 | | P-II family nitrogen regulator | 0.54 | QEN71_RS23870 | | excinuclease ABC subunit UvrB | low | > 153 |
| Burkholderia phytofirmans PsJN | 0.79 | BPHYT_RS02545 | | nitrogen regulatory protein P-II 1 | 0.55 | BPHYT_RS06905 | | excinuclease ABC subunit B | low | > 109 |
| Ralstonia solanacearum GMI1000 | 0.79 | RS_RS01685 | | nitrogen regulatory protein P-II 1 | 0.55 | RS_RS05005 | | UvrABC system protein B | low | > 80 |
| Rhodanobacter denitrificans MT42 | 0.79 | LRK55_RS10205 | | P-II family nitrogen regulator | 0.55 | LRK55_RS13955 | | excinuclease ABC subunit UvrB | low | > 63 |
| Ralstonia solanacearum IBSBF1503 | 0.79 | RALBFv3_RS10845 | | nitrogen regulatory protein P-II 1 | 0.55 | RALBFv3_RS14225 | | excinuclease ABC subunit UvrB | low | > 76 |
| Ralstonia solanacearum PSI07 | 0.79 | RPSI07_RS22465 | | nitrogen regulatory protein P-II 1 | 0.55 | RPSI07_RS19240 | | excinuclease ABC subunit UvrB | low | > 81 |
| Ralstonia solanacearum UW163 | 0.79 | UW163_RS02735 | | nitrogen regulatory protein P-II 1 | 0.55 | UW163_RS11690 | | excinuclease ABC subunit UvrB | — | — |
| Rhodanobacter denitrificans FW104-10B01 | 0.79 | LRK54_RS10565 | | P-II family nitrogen regulator | 0.55 | LRK54_RS14235 | | excinuclease ABC subunit UvrB | low | > 59 |
| Cupriavidus basilensis FW507-4G11 | 0.78 | RR42_RS01755 | | nitrogen regulatory protein P-II 1 | 0.55 | RR42_RS05995 | | excinuclease ABC subunit B | low | > 128 |
| Marinobacter adhaerens HP15 | 0.78 | HP15_275 | | nitrogen regulatory protein PII | 0.54 | HP15_1372 | | excinuclease ABC subunit B | — | — |
| Pseudomonas stutzeri RCH2 | 0.77 | Psest_3773 | | Nitrogen regulatory protein PII | 0.56 | Psest_1296 | | excinuclease ABC, B subunit | — | — |
| Herbaspirillum seropedicae SmR1 | 0.77 | HSERO_RS00420 | | nitrogen regulatory protein P-II 1 | 0.53 | HSERO_RS15840 | | excinuclease ABC subunit B | — | — |
| Rhodospirillum rubrum S1H | 0.77 | Rru_A1130 | | Nitrogen regulatory protein P-II (GlnB, GlnK) (NCBI) | 0.77 | Rru_A1133 | | Excinuclease ABC, B subunit (NCBI) | low | > 58 |
| Acinetobacter radioresistens SK82 | 0.77 | MPMX26_00149 | | Nitrogen regulatory protein P-II 2 | 0.55 | MPMX26_02142 | | UvrABC system protein B | — | — |
| Xanthomonas campestris pv. campestris strain 8004 | 0.76 | Xcc-8004.248.1 | | Nitrogen regulatory protein P-II | 0.57 | Xcc-8004.2034.1 | | Excinuclease ABC subunit B | low | > 74 |
| Pseudomonas sp. RS175 | 0.76 | PFR28_04383 | | Nitrogen regulatory protein P-II 2 | 0.57 | PFR28_02837 | | UvrABC system protein B | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.76 | PFLU_RS29305 | | P-II family nitrogen regulator | 0.56 | PFLU_RS20655 | | excinuclease ABC subunit B | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.76 | AO356_12700 | | transcriptional regulator | 0.57 | AO356_21335 | | excinuclease ABC subunit B | — | — |
| Pseudomonas fluorescens SBW25 | 0.76 | PFLU_RS29305 | | P-II family nitrogen regulator | 0.56 | PFLU_RS20655 | | excinuclease ABC subunit B | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.76 | PfGW456L13_837 | | Nitrogen regulatory protein P-II, glnK | 0.56 | PfGW456L13_3959 | | Excinuclease ABC subunit B | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.76 | Pf1N1B4_2166 | | Nitrogen regulatory protein P-II, glnK | 0.56 | Pf1N1B4_26 | | Excinuclease ABC subunit B | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.76 | AO353_09075 | | transcriptional regulator | 0.57 | AO353_20545 | | excinuclease ABC subunit B | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.76 | Pf6N2E2_4411 | | Nitrogen regulatory protein P-II, glnK | 0.57 | Pf6N2E2_52 | | Excinuclease ABC subunit B | — | — |
| Dechlorosoma suillum PS | 0.76 | Dsui_0764 | | nitrogen regulatory protein PII | 0.57 | Dsui_2434 | | excinuclease ABC, B subunit | low | > 51 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.76 | Psyr_0190 | | nitrogen regulatory protein P-II | 0.57 | Psyr_1974 | | Excinuclease ABC subunit B | — | — |
| Pseudomonas putida KT2440 | 0.76 | PP_5234 | | activator of NRII(GlnL/NtrB) phosphatase | 0.57 | PP_1974 | | excinuclease UvrABC protein B | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.76 | Psyr_0190 | | nitrogen regulatory protein P-II | 0.57 | Psyr_1974 | | Excinuclease ABC subunit B | — | — |
| Pseudomonas simiae WCS417 | 0.76 | PS417_27620 | | nitrogen regulatory protein P-II 1 | 0.56 | PS417_18685 | | excinuclease ABC subunit B | — | — |
| Alteromonas macleodii MIT1002 | 0.76 | MIT1002_00416 | | Nitrogen regulatory protein P-II 2 | 0.56 | MIT1002_01261 | | Excinuclease ABC subunit B | low | > 70 |
| Vibrio cholerae E7946 ATCC 55056 | 0.76 | CSW01_03195 | | transcriptional regulator | 0.57 | CSW01_05185 | | excinuclease ABC subunit UvrB | low | > 62 |
| Dyella japonica UNC79MFTsu3.2 | 0.76 | ABZR86_RS13505 | | P-II family nitrogen regulator | 0.55 | ABZR86_RS09750 | | excinuclease ABC subunit UvrB | low | > 74 |
| Sphingomonas koreensis DSMZ 15582 | 0.74 | Ga0059261_2255 | | nitrogen regulatory protein P-II family | 0.67 | Ga0059261_3779 | | Excinuclease ABC subunit B | low | > 68 |
| Dinoroseobacter shibae DFL-12 | 0.74 | Dshi_0143 | | nitrogen regulatory protein P-II (RefSeq) | 0.68 | Dshi_2192 | | excinuclease ABC, B subunit (RefSeq) | — | — |
| Castellaniella sp019104865 MT123 | 0.74 | ABCV34_RS03065 | | P-II family nitrogen regulator | 0.56 | ABCV34_RS05110 | | excinuclease ABC subunit UvrB | low | > 48 |
| Enterobacter asburiae PDN3 | 0.73 | EX28DRAFT_2519 | | nitrogen regulatory protein P-II family | 0.56 | EX28DRAFT_2211 | | Excinuclease ABC subunit B | low | > 76 |
| Lysobacter sp. OAE881 | 0.73 | ABIE51_RS00145 | | P-II family nitrogen regulator | 0.56 | ABIE51_RS15310 | | excinuclease ABC subunit UvrB | low | > 62 |
| Enterobacter sp. TBS_079 | 0.73 | MPMX20_01042 | | Nitrogen regulatory protein P-II 2 | 0.56 | MPMX20_01408 | | UvrABC system protein B | low | > 85 |
| Klebsiella michiganensis M5al | 0.73 | BWI76_RS06600 | | nitrogen regulatory protein P-II 2 | 0.56 | BWI76_RS08785 | | excinuclease ABC subunit B | — | — |
| Pantoea sp. MT58 | 0.73 | IAI47_14585 | | P-II family nitrogen regulator | 0.56 | IAI47_13505 | | excinuclease ABC subunit B | low | > 76 |
| Serratia liquefaciens MT49 | 0.73 | IAI46_05080 | | P-II family nitrogen regulator | 0.57 | IAI46_06550 | | excinuclease ABC subunit B | low | > 86 |
| Caulobacter crescentus NA1000 | 0.73 | CCNA_01400 | | nitrogen regulatory protein GlnK | 0.68 | CCNA_03076 | | excinuclease ABC subunit B | low | > 66 |
| Caulobacter crescentus NA1000 Δfur | 0.73 | CCNA_01400 | | nitrogen regulatory protein GlnK | 0.68 | CCNA_03076 | | excinuclease ABC subunit B | low | > 67 |
| Escherichia coli BL21 | 0.72 | ECD_00402 | | nitrogen assimilation regulatory protein for GlnL, GlnE, and AmtB | 0.56 | ECD_00746 | | exision nuclease of nucleotide excision repair, DNA damage recognition component | 0.37 | 37 |
| Escherichia coli ECRC99 | 0.72 | KEDOAH_19700 | glnK | P-II family nitrogen regulator | 0.56 | KEDOAH_21530 | uvrB | excinuclease ABC subunit UvrB | — | — |
| Dickeya dianthicola 67-19 | 0.72 | HGI48_RS05740 | | P-II family nitrogen regulator | 0.57 | HGI48_RS08695 | | excinuclease ABC subunit B | 0.60 | 59 |
| Rahnella sp. WP5 | 0.72 | EX31_RS22315 | | P-II family nitrogen regulator | 0.57 | EX31_RS23720 | | excinuclease ABC subunit B | low | > 89 |
| Escherichia coli ECOR27 | 0.72 | NOLOHH_01200 | glnK | P-II family nitrogen regulator | 0.56 | NOLOHH_22750 | uvrB | excinuclease ABC subunit UvrB | low | > 75 |
| Escherichia coli ECRC98 | 0.72 | JDDGAC_11920 | glnK | P-II family nitrogen regulator | 0.56 | JDDGAC_10015 | uvrB | excinuclease ABC subunit UvrB | low | > 86 |
| Dickeya dadantii 3937 | 0.72 | DDA3937_RS05695 | | P-II family nitrogen regulator | 0.57 | DDA3937_RS08530 | | excinuclease ABC subunit B | low | > 74 |
| Escherichia coli ECRC101 | 0.72 | MCAODC_27490 | glnK | P-II family nitrogen regulator | 0.56 | MCAODC_25595 | uvrB | excinuclease ABC subunit UvrB | low | > 87 |
| Pectobacterium carotovorum WPP14 | 0.72 | HER17_RS15790 | | P-II family nitrogen regulator | 0.58 | HER17_RS13420 | | excinuclease ABC subunit B | low | > 75 |
| Escherichia coli ECRC62 | 0.72 | BNILDI_22615 | glnK | P-II family nitrogen regulator | 0.56 | BNILDI_21020 | uvrB | excinuclease ABC subunit UvrB | low | > 75 |
| Escherichia coli ECRC102 | 0.72 | NIAGMN_06320 | glnK | P-II family nitrogen regulator | 0.56 | NIAGMN_04425 | uvrB | excinuclease ABC subunit UvrB | — | — |
| Escherichia fergusonii Becca | 0.72 | EFB2_03607 | | Nitrogen regulatory protein P-II 2 | 0.56 | EFB2_03326 | | UvrABC system protein B | low | > 86 |
| Escherichia coli ECOR38 | 0.72 | HEPCGN_06880 | glnK | P-II family nitrogen regulator | 0.56 | HEPCGN_01660 | uvrB | excinuclease ABC subunit UvrB | low | > 87 |
| Escherichia coli Nissle 1917 | 0.72 | ECOLIN_RS02695 | | P-II family nitrogen regulator | 0.56 | ECOLIN_RS04150 | | excinuclease ABC subunit UvrB | — | — |
| Escherichia coli BW25113 | 0.72 | b0450 | glnK | nitrogen assimilation regulatory protein for GlnL, GlnE, and AmtB (NCBI) | 0.56 | b0779 | uvrB | excinuclease ABC subunit B (NCBI) | low | > 76 |
| Dickeya dianthicola ME23 | 0.72 | DZA65_RS06065 | | P-II family nitrogen regulator | 0.57 | DZA65_RS08990 | | excinuclease ABC subunit B | low | > 75 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.72 | OHPLBJKB_03223 | | Nitrogen regulatory protein P-II 2 | 0.56 | OHPLBJKB_02934 | | UvrABC system protein B | low | > 73 |
| Escherichia coli ECRC100 | 0.72 | OKFHMN_08265 | glnK | P-II family nitrogen regulator | 0.56 | OKFHMN_06380 | uvrB | excinuclease ABC subunit UvrB | low | > 80 |
| Shewanella loihica PV-4 | 0.71 | Shew_0846 | | nitrogen regulatory protein P-II (RefSeq) | 0.56 | Shew_2064 | | excinuclease ABC subunit B (RefSeq) | low | > 60 |
| Erwinia tracheiphila SCR3 | 0.71 | LU632_RS18275 | glnK | P-II family nitrogen regulator | 0.57 | LU632_RS09160 | uvrB | excinuclease ABC subunit B | low | > 74 |
| Shewanella oneidensis MR-1 | 0.71 | SO0761 | glnB-1 | nitrogen regulatory protein P-II 1 (NCBI ptt file) | 0.57 | SO2506 | uvrB | excinuclease ABC, B subunit (NCBI ptt file) | low | > 76 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.70 | GFF4367 | | Nitrogen regulatory protein P-II, glnK | 0.57 | GFF675 | | Excinuclease ABC subunit B | 0.40 | 24 |
| Phaeobacter inhibens DSM 17395 | 0.69 | PGA1_c29400 | | nitrogen regulatory protein P-II | 0.67 | PGA1_c26160 | | uvrABC system protein B | low | > 62 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.44 | Echvi_1453 | | Nitrogen regulatory protein PII | 0.50 | Echvi_1215 | | excinuclease ABC, B subunit | low | > 79 |
Not shown: 5 genomes with orthologs for AMB_RS00075 only; 23 genomes with orthologs for AMB_RS19255 only