Conservation of cofitness between ABZR87_RS13545 and ABZR87_RS14510 in Ralstonia sp. UNC404CL21Col

73 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Ralstonia sp. UNC404CL21Col 1.0 ABZR87_RS13545 amino acid permease 1.0 ABZR87_RS14510 tRNA pseudouridine(38-40) synthase TruA 0.49 4
Ralstonia solanacearum PSI07 0.91 RPSI07_RS15760 amino acid permease 0.92 RPSI07_RS14720 tRNA pseudouridine(38-40) synthase TruA low > 81
Ralstonia solanacearum UW163 0.90 UW163_RS15035 amino acid permease 0.91 UW163_RS11130 tRNA pseudouridine(38-40) synthase TruA — —
Ralstonia solanacearum IBSBF1503 0.90 RALBFv3_RS01725 amino acid permease 0.91 RALBFv3_RS02595 tRNA pseudouridine(38-40) synthase TruA — —
Ralstonia solanacearum GMI1000 0.88 RS_RS08000 amino acid permease 0.93 RS_RS09975 tRNA pseudouridine(38-40) synthase TruA low > 80
Cupriavidus basilensis FW507-4G11 0.79 RR42_RS01585 amino acid permease 0.70 RR42_RS14370 tRNA pseudouridine synthase A — —
Paraburkholderia graminis OAS925 0.73 ABIE53_000447 APA family basic amino acid/polyamine antiporter 0.62 ABIE53_004807 tRNA pseudouridine38-40 synthase low > 113
Paraburkholderia sabiae LMG 24235 0.71 QEN71_RS00500 amino acid permease 0.65 QEN71_RS17635 tRNA pseudouridine(38-40) synthase TruA low > 153
Paraburkholderia bryophila 376MFSha3.1 0.71 H281DRAFT_02180 amino acid/polyamine/organocation transporter, APC superfamily 0.63 H281DRAFT_06069 tRNA pseudouridine38-40 synthase low > 103
Burkholderia phytofirmans PsJN 0.69 BPHYT_RS01785 amino acid permease 0.63 BPHYT_RS33885 tRNA pseudouridine synthase A low > 109
Bifidobacterium breve UCC2003 0.55 BBR_RS13165 amino acid permease 0.22 BBR_RS18795 tRNA pseudouridine(38-40) synthase TruA low > 34
Pontibacter actiniarum KMM 6156, DSM 19842 0.46 CA264_09570 amino acid permease 0.28 CA264_17725 tRNA pseudouridine synthase A low > 74
Rhodanobacter sp. FW510-T8 0.45 OKGIIK_05010 potE amino acid permease 0.36 OKGIIK_04830 truA tRNA pseudouridine(38-40) synthase TruA — —
Dyella japonica UNC79MFTsu3.2 0.45 ABZR86_RS06670 amino acid permease 0.39 ABZR86_RS08015 tRNA pseudouridine(38-40) synthase TruA low > 74
Pedobacter sp. GW460-11-11-14-LB5 0.45 CA265_RS17395 amino acid transporter 0.24 CA265_RS15580 tRNA pseudouridine(38-40) synthase TruA low > 88
Rhodanobacter denitrificans FW104-10B01 0.45 LRK54_RS01525 amino acid permease 0.38 LRK54_RS01700 tRNA pseudouridine(38-40) synthase TruA low > 59
Rhodanobacter denitrificans MT42 0.45 LRK55_RS01315 amino acid permease 0.38 LRK55_RS01480 tRNA pseudouridine(38-40) synthase TruA low > 63
Xanthomonas campestris pv. campestris strain 8004 0.44 Xcc-8004.2936.1 Amino acid transporters 0.37 Xcc-8004.1961.1 tRNA pseudouridine synthase A (EC 4.2.1.70) low > 74
Parabacteroides merdae CL09T00C40 0.43 HMPREF1078_RS09620 amino acid permease 0.24 HMPREF1078_RS16085 tRNA pseudouridine(38-40) synthase TruA 0.38 25
Phocaeicola vulgatus CL09T03C04 0.43 HMPREF1058_RS13815 amino acid permease 0.27 HMPREF1058_RS16775 tRNA pseudouridine(38-40) synthase TruA 0.58 24
Lysobacter sp. OAE881 0.43 ABIE51_RS13265 amino acid permease 0.38 ABIE51_RS08245 tRNA pseudouridine(38-40) synthase TruA low > 62
Caulobacter crescentus NA1000 Δfur 0.42 CCNA_01242 amino acid permease 0.30 CCNA_00280 tRNA pseudouridine synthase A low > 67
Rhodopseudomonas palustris CGA009 0.42 TX73_003040 amino acid permease 0.30 TX73_003225 tRNA pseudouridine(38-40) synthase TruA low > 86
Caulobacter crescentus NA1000 0.42 CCNA_01242 amino acid permease 0.30 CCNA_00280 tRNA pseudouridine synthase A low > 66
Sphingomonas koreensis DSMZ 15582 0.41 Ga0059261_1053 amino acid/polyamine/organocation transporter, APC superfamily (TC 2.A.3) 0.32 Ga0059261_0647 tRNA pseudouridine(38-40) synthase low > 68
Mucilaginibacter yixingensis YX-36 DSM 26809 0.39 ABZR88_RS11630 amino acid permease 0.20 ABZR88_RS21140 tRNA pseudouridine(38-40) synthase TruA low > 71
Brevundimonas sp. GW460-12-10-14-LB2 0.37 A4249_RS05420 amino acid permease 0.29 A4249_RS12340 tRNA pseudouridine(38-40) synthase TruA low > 48
Mycobacterium tuberculosis H37Rv 0.36 Rv2320c Probable cationic amino acid transport integral membrane protein RocE 0.18 Rv3455c Probable tRNA pseudouridine synthase a TruA (pseudouridylate synthase I) (pseudouridine synthase I) (uracil hydrolyase) — —
Bosea sp. OAE506 0.14 ABIE41_RS20970 APC family permease 0.34 ABIE41_RS00165 tRNA pseudouridine(38-40) synthase TruA low > 77
Serratia liquefaciens MT49 0.13 IAI46_17155 APC family permease 0.42 IAI46_17840 tRNA pseudouridine(38-40) synthase TruA low > 86
Pseudomonas putida KT2440 0.13 PP_0544 Ethanolamine transporter 0.44 PP_1994 tRNA pseudouridine (38-40)synthase low > 96
Pectobacterium carotovorum WPP14 0.12 HER17_RS12140 APC family permease 0.41 HER17_RS06990 tRNA pseudouridine(38-40) synthase TruA low > 75
Pseudomonas stutzeri RCH2 0.12 Psest_0670 ethanolamine permease 0.41 Psest_2585 pseudouridylate synthase I low > 67
Pseudomonas sp. RS175 0.12 PFR28_01269 Putrescine importer PuuP 0.41 PFR28_02817 tRNA pseudouridine synthase A low > 88
Pseudomonas fluorescens FW300-N2E2 0.12 Pf6N2E2_2179 Putrescine importer 0.42 Pf6N2E2_70 tRNA pseudouridine synthase A (EC 4.2.1.70) low > 103
Pseudomonas fluorescens FW300-N1B4 0.12 Pf1N1B4_5855 Putrescine importer 0.43 Pf1N1B4_7 tRNA pseudouridine synthase A (EC 4.2.1.70) low > 87
Dickeya dianthicola 67-19 0.12 HGI48_RS09825 APC family permease 0.42 HGI48_RS14435 tRNA pseudouridine(38-40) synthase TruA low > 71
Rahnella sp. WP5 0.12 EX31_RS20130 ethanolamine permease 0.44 EX31_RS19600 tRNA pseudouridine(38-40) synthase TruA low > 89
Pseudomonas fluorescens FW300-N2C3 0.12 AO356_01520 porin 0.42 AO356_21435 pseudouridine synthase low > 104
Dickeya dadantii 3937 0.12 DDA3937_RS09815 APC family permease 0.43 DDA3937_RS14465 tRNA pseudouridine(38-40) synthase TruA low > 74
Pseudomonas fluorescens FW300-N2E3 0.12 AO353_27910 porin 0.42 AO353_20660 pseudouridine synthase low > 101
Dickeya dianthicola ME23 0.12 DZA65_RS10150 APC family permease 0.43 DZA65_RS15370 tRNA pseudouridine(38-40) synthase TruA low > 75
Shewanella sp. ANA-3 0.12 Shewana3_3634 amino acid permease-associated region (RefSeq) 0.44 Shewana3_1479 truA tRNA pseudouridine synthase A (RefSeq) low > 73
Klebsiella michiganensis M5al 0.12 BWI76_RS03640 amino acid permease-associated protein 0.42 BWI76_RS20380 tRNA pseudouridine(38-40) synthase TruA low > 92
Acinetobacter radioresistens SK82 0.11 MPMX26_01769 putative amino acid permease YhdG 0.37 MPMX26_00352 tRNA pseudouridine synthase A — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.11 OHPLBJKB_02386 Putrescine importer PuuP 0.43 OHPLBJKB_01387 tRNA pseudouridine synthase A low > 73
Escherichia coli BL21 0.11 ECD_01273 putrescine importer 0.43 ECD_02243 tRNA pseudouridine(38-40) synthase — —
Rhizobium sp. OAE497 0.11 ABIE40_RS17315 APC family permease 0.32 ABIE40_RS01915 tRNA pseudouridine(38-40) synthase TruA low > 107
Escherichia coli ECOR27 0.11 NOLOHH_20135 puuP putrescine/proton symporter PuuP 0.43 NOLOHH_14305 truA tRNA pseudouridine(38-40) synthase TruA low > 75
Pseudomonas syringae pv. syringae B728a ΔmexB 0.11 Psyr_2379 amino acid/polyamine/organocation transporter, APC superfamily 0.41 Psyr_1662 tRNA pseudouridine synthase low > 86
Pseudomonas syringae pv. syringae B728a 0.11 Psyr_2379 amino acid/polyamine/organocation transporter, APC superfamily 0.41 Psyr_1662 tRNA pseudouridine synthase low > 86
Escherichia coli BW25113 0.11 b1296 ycjJ putative amino acid/amine transport protein (VIMSS) 0.43 b2318 truA tRNA pseudouridine synthase A (NCBI) low > 76
Herbaspirillum seropedicae SmR1 0.11 HSERO_RS12590 ethanolamin permease 0.55 HSERO_RS16485 tRNA pseudouridine synthase A low > 78
Escherichia coli ECRC62 0.11 BNILDI_18285 puuP putrescine/proton symporter PuuP 0.42 BNILDI_13225 truA tRNA pseudouridine(38-40) synthase TruA low > 75
Escherichia coli ECRC100 0.11 OKFHMN_02450 puuP putrescine/proton symporter PuuP 0.42 OKFHMN_22670 truA aspartate-semialdehyde dehydrogenase low > 80
Escherichia coli ECRC99 0.11 KEDOAH_26325 puuP putrescine/proton symporter PuuP 0.42 KEDOAH_05525 truA aspartate-semialdehyde dehydrogenase — —
Escherichia coli ECRC98 0.11 JDDGAC_04995 puuP putrescine/proton symporter PuuP 0.42 JDDGAC_26630 truA aspartate-semialdehyde dehydrogenase — —
Escherichia coli ECRC102 0.11 NIAGMN_26620 puuP putrescine/proton symporter PuuP 0.42 NIAGMN_20445 truA aspartate-semialdehyde dehydrogenase — —
Enterobacter asburiae PDN3 0.11 EX28DRAFT_1496 Amino acid transporters 0.44 EX28DRAFT_0286 tRNA pseudouridine(38-40) synthase low > 76
Escherichia coli ECRC101 0.11 MCAODC_15820 puuP putrescine/proton symporter PuuP 0.42 MCAODC_13710 truA aspartate-semialdehyde dehydrogenase low > 87
Pantoea sp. MT58 0.11 IAI47_07130 APC family permease 0.40 IAI47_06245 tRNA pseudouridine(38-40) synthase TruA low > 76
Escherichia coli Nissle 1917 0.11 ECOLIN_RS11915 putrescine/proton symporter PlaP 0.42 ECOLIN_RS13435 tRNA pseudouridine(38-40) synthase TruA 0.54 32
Enterobacter sp. TBS_079 0.11 MPMX20_02998 Low-affinity putrescine importer PlaP 0.44 MPMX20_03253 tRNA pseudouridine synthase A low > 85
Escherichia fergusonii Becca 0.10 EFB2_01842 Low-affinity putrescine importer PlaP 0.43 EFB2_01540 tRNA pseudouridine synthase A low > 86
Escherichia coli ECOR38 0.10 HEPCGN_03255 plaP putrescine/proton symporter PlaP 0.42 HEPCGN_21875 truA aspartate-semialdehyde dehydrogenase low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.10 GFF3916 Putrescine importer 0.43 GFF1934 tRNA pseudouridine synthase A (EC 4.2.1.70) low > 78
Variovorax sp. OAS795 0.10 ABID97_RS19505 ethanolamine permease 0.46 ABID97_RS08440 tRNA pseudouridine(38-40) synthase TruA low > 91
Azospirillum sp. SherDot2 0.10 MPMX19_05701 Putrescine transporter PotE 0.34 MPMX19_02005 tRNA pseudouridine synthase A — —
Rhodospirillum rubrum S1H 0.10 Rru_A1030 Amino acid permease-associated region (NCBI) 0.36 Rru_A3352 Pseudouridylate synthase (NCBI) — —
Agrobacterium fabrum C58 0.09 Atu2143 ABC transporter, membrane spanning protein (amino acid) 0.32 Atu0368 tRNA pseudouridine synthase I low > 89
Pseudomonas sp. S08-1 0.09 OH686_03555 Lysine/cadaverine antiporter membrane protein CadB 0.42 OH686_04450 tRNA pseudouridine(38-40) synthase low > 80
Sinorhizobium meliloti 1021 0.08 SMc02616 permease transmembrane protein 0.30 SMc01099 tRNA pseudouridine synthase A low > 103
Marinobacter adhaerens HP15 0.08 HP15_180 amino acid transporter 0.40 HP15_1829 tRNA pseudouridine synthase A low > 73
Dinoroseobacter shibae DFL-12 0.07 Dshi_3942 amino acid permease-associated region (RefSeq) 0.31 Dshi_1938 tRNA pseudouridine synthase A (RefSeq) — —

Not shown: 1 genomes with orthologs for ABZR87_RS13545 only; 29 genomes with orthologs for ABZR87_RS14510 only