| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Ralstonia sp. UNC404CL21Col | 1.0 | ABZR87_RS14065 | | polyphosphate kinase 1 | 1.0 | ABZR87_RS11065 | | nitrogen regulation protein NR(II) | 0.35 | 18 |
| Ralstonia solanacearum PSI07 | 0.89 | RPSI07_RS15330 | | polyphosphate kinase 1 | 0.85 | RPSI07_RS17820 | | PAS domain-containing sensor histidine kinase | low | > 81 |
| Ralstonia solanacearum UW163 | 0.89 | UW163_RS15425 | | polyphosphate kinase 1 | 0.85 | UW163_RS12995 | | PAS domain-containing sensor histidine kinase | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.89 | RALBFv3_RS02115 | | polyphosphate kinase 1 | 0.85 | RALBFv3_RS15535 | | PAS domain-containing sensor histidine kinase | — | — |
| Ralstonia solanacearum GMI1000 | 0.88 | RS_RS07705 | | polyphosphate kinase 1 | 0.84 | RS_RS06315 | | PAS domain-containing sensor histidine kinase | low | > 80 |
| Cupriavidus basilensis FW507-4G11 | 0.78 | RR42_RS13435 | | polyphosphate kinase | 0.71 | RR42_RS12985 | | histidine kinase | low | > 128 |
| Paraburkholderia sabiae LMG 24235 | 0.68 | QEN71_RS04860 | | polyphosphate kinase 1 | 0.60 | QEN71_RS05670 | | nitrogen regulation protein NR(II) | low | > 153 |
| Burkholderia phytofirmans PsJN | 0.68 | BPHYT_RS14110 | | polyphosphate kinase | 0.60 | BPHYT_RS12940 | | signal transduction histidine kinase | low | > 109 |
| Paraburkholderia graminis OAS925 | 0.67 | ABIE53_002988 | | polyphosphate kinase | 0.61 | ABIE53_002805 | | two-component system nitrogen regulation sensor histidine kinase GlnL | low | > 113 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.67 | H281DRAFT_04418 | | polyphosphate kinase | 0.60 | H281DRAFT_00453 | | two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL | low | > 103 |
| Dechlorosoma suillum PS | 0.59 | Dsui_2814 | | polyphosphate kinase 1 | 0.46 | Dsui_1050 | | signal transduction histidine kinase, nitrogen specific | low | > 51 |
| Acinetobacter radioresistens SK82 | 0.50 | MPMX26_02335 | | Polyphosphate kinase | 0.29 | MPMX26_01293 | | Sensory histidine kinase/phosphatase NtrB | low | > 36 |
| Herbaspirillum seropedicae SmR1 | 0.49 | HSERO_RS06305 | | polyphosphate kinase | 0.57 | HSERO_RS15685 | | histidine kinase | low | > 78 |
| Lysobacter sp. OAE881 | 0.49 | ABIE51_RS14230 | | polyphosphate kinase 1 | 0.24 | ABIE51_RS01365 | | ATP-binding protein | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.48 | Psyr_0293 | | Polyphosphate kinase | 0.34 | Psyr_4821 | | PAS/PAC sensor signal transduction histidine kinase | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.48 | Psyr_0293 | | Polyphosphate kinase | 0.34 | Psyr_4821 | | PAS/PAC sensor signal transduction histidine kinase | low | > 86 |
| Rhodanobacter denitrificans FW104-10B01 | 0.48 | LRK54_RS16000 | | polyphosphate kinase 1 | 0.19 | LRK54_RS07985 | | ATP-binding protein | low | > 59 |
| Pseudomonas putida KT2440 | 0.48 | PP_5217 | | Polyphosphate kinase | 0.33 | PP_5047 | | two-component system sensory histidine kinase/phosphatase GlnL/GlnG | low | > 96 |
| Pseudomonas sp. S08-1 | 0.48 | OH686_13995 | | polyphosphate kinase 1 | 0.34 | OH686_10635 | | Nitrogen regulation protein NtrB | low | > 80 |
| Pseudomonas sp. RS175 | 0.48 | PFR28_04345 | | Polyphosphate kinase | 0.34 | PFR28_04945 | | Sensory histidine kinase/phosphatase NtrB | low | > 88 |
| Rhodanobacter denitrificans MT42 | 0.48 | LRK55_RS15755 | | polyphosphate kinase 1 | 0.19 | LRK55_RS07735 | | ATP-binding protein | low | > 63 |
| Pseudomonas fluorescens FW300-N2C3 | 0.48 | AO356_12895 | | polyphosphate kinase | 0.34 | AO356_09725 | | histidine kinase | low | > 104 |
| Pseudomonas fluorescens GW456-L13 | 0.48 | PfGW456L13_874 | | Polyphosphate kinase (EC 2.7.4.1) | 0.34 | PfGW456L13_346 | | Nitrogen regulation protein NtrB (EC 2.7.13.3) | low | > 87 |
| Pseudomonas fluorescens FW300-N2E2 | 0.48 | Pf6N2E2_4453 | | Polyphosphate kinase (EC 2.7.4.1) | 0.34 | Pf6N2E2_3825 | | Nitrogen regulation protein NtrB (EC 2.7.13.3) | low | > 103 |
| Pseudomonas simiae WCS417 | 0.48 | PS417_27435 | | polyphosphate kinase | 0.33 | PS417_01640 | | histidine kinase | low | > 88 |
| Pseudomonas fluorescens SBW25 | 0.48 | PFLU_RS29095 | | polyphosphate kinase 1 | 0.33 | PFLU_RS01690 | | nitrogen regulation protein NR(II) | low | > 109 |
| Pseudomonas fluorescens FW300-N1B4 | 0.48 | Pf1N1B4_2208 | | Polyphosphate kinase (EC 2.7.4.1) | 0.34 | Pf1N1B4_1610 | | Nitrogen regulation protein NtrB (EC 2.7.13.3) | low | > 87 |
| Pseudomonas fluorescens FW300-N2E3 | 0.48 | AO353_08885 | | polyphosphate kinase | 0.34 | AO353_12150 | | histidine kinase | low | > 101 |
| Pseudomonas fluorescens SBW25-INTG | 0.48 | PFLU_RS29095 | | polyphosphate kinase 1 | 0.33 | PFLU_RS01690 | | nitrogen regulation protein NR(II) | low | > 109 |
| Dyella japonica UNC79MFTsu3.2 | 0.48 | ABZR86_RS07490 | | polyphosphate kinase 1 | 0.22 | ABZR86_RS15510 | | ATP-binding protein | low | > 74 |
| Pseudomonas stutzeri RCH2 | 0.47 | Psest_3732 | | polyphosphate kinase 1 | 0.31 | Psest_3931 | | Signal transduction histidine kinase, nitrogen specific | low | > 67 |
| Rhodanobacter sp. FW510-T8 | 0.47 | OKGIIK_08995 | ppk1 | RNA degradosome polyphosphate kinase | 0.20 | OKGIIK_14470 | | PAS domain-containing sensor histidine kinase | low | > 52 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.47 | Xcc-8004.4064.1 | | Polyphosphate kinase (EC 2.7.4.1) | 0.21 | Xcc-8004.251.1 | | Nitrogen regulation protein NtrB (EC 2.7.13.3) | low | > 74 |
| Kangiella aquimarina DSM 16071 | 0.46 | B158DRAFT_2312 | | polyphosphate kinase 1 | 0.22 | B158DRAFT_0715 | | Signal transduction histidine kinase, nitrogen specific | low | > 40 |
| Marinobacter adhaerens HP15 | 0.46 | HP15_3334 | | polyphosphate kinase | 0.33 | HP15_426 | | signal transduction histidine kinase, nitrogen specific, NtrB | low | > 73 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.44 | GFF4226 | | Polyphosphate kinase (EC 2.7.4.1) | 0.55 | GFF5270 | | Nitrogen regulation protein NtrB (EC 2.7.13.3) | low | > 90 |
| Variovorax sp. SCN45 | 0.44 | GFF1089 | | Polyphosphate kinase (EC 2.7.4.1) | 0.52 | GFF3067 | | Nitrogen regulation protein NtrB (EC 2.7.13.3) | low | > 127 |
| Variovorax sp. OAS795 | 0.43 | ABID97_RS14575 | | polyphosphate kinase 1 | 0.52 | ABID97_RS09940 | | nitrogen regulation protein NR(II) | low | > 91 |
| Acidovorax sp. GW101-3H11 | 0.41 | Ac3H11_452 | | Polyphosphate kinase (EC 2.7.4.1) | 0.52 | Ac3H11_4431 | | Nitrogen regulation protein NtrB (EC 2.7.13.3) | low | > 79 |
| Rhodopseudomonas palustris CGA009 | 0.34 | TX73_015770 | | RNA degradosome polyphosphate kinase | 0.24 | TX73_013415 | | nitrogen regulation protein NR(II) | low | > 86 |
| Rhizobium sp. OAE497 | 0.33 | ABIE40_RS06575 | | RNA degradosome polyphosphate kinase | 0.24 | ABIE40_RS09085 | | nitrogen regulation protein NR(II) | 0.51 | 8 |
| Agrobacterium fabrum C58 | 0.33 | Atu1144 | | polyphosphate kinase | 0.23 | Atu1445 | | two component sensor kinase | — | — |
| Bosea sp. OAE506 | 0.33 | ABIE41_RS16125 | | RNA degradosome polyphosphate kinase | 0.21 | ABIE41_RS16790 | | ATP-binding protein | low | > 77 |
| Sinorhizobium meliloti 1021 | 0.33 | SMc00618 | | polyphosphate kinase | 0.22 | SMc01042 | | nitrogen regulation protein | low | > 103 |
| Dinoroseobacter shibae DFL-12 | 0.33 | Dshi_0740 | | Polyphosphate kinase (RefSeq) | 0.20 | Dshi_1575 | | signal transduction histidine kinase, nitrogen specific, NtrB (RefSeq) | low | > 64 |
| Caulobacter crescentus NA1000 | 0.32 | CCNA_01782 | | polyphosphate kinase 1 | 0.20 | CCNA_01814 | | nitrogen regulation protein ntrB | low | > 66 |
| Caulobacter crescentus NA1000 Δfur | 0.32 | CCNA_01782 | | polyphosphate kinase 1 | 0.20 | CCNA_01814 | | nitrogen regulation protein ntrB | low | > 67 |
| Azospirillum sp. SherDot2 | 0.32 | MPMX19_01149 | | Polyphosphate kinase | 0.19 | MPMX19_01111 | | Sensory histidine kinase/phosphatase NtrB | low | > 112 |
| Azospirillum brasilense Sp245 | 0.32 | AZOBR_RS16235 | | polyphosphate kinase | 0.21 | AZOBR_RS14425 | | ATPase | low | > 97 |
| Magnetospirillum magneticum AMB-1 | 0.30 | AMB_RS14295 | | RNA degradosome polyphosphate kinase | 0.21 | AMB_RS11945 | | PAS domain-containing sensor histidine kinase | — | — |
| Dickeya dadantii 3937 | 0.28 | DDA3937_RS15150 | | polyphosphate kinase 1 | 0.28 | DDA3937_RS00130 | | nitrogen regulation protein NR(II) | 0.70 | 18 |
| Pectobacterium carotovorum WPP14 | 0.28 | HER17_RS06425 | | polyphosphate kinase 1 | 0.28 | HER17_RS21435 | | nitrogen regulation protein NR(II) | low | > 75 |
| Dickeya dianthicola ME23 | 0.28 | DZA65_RS16045 | | polyphosphate kinase 1 | 0.28 | DZA65_RS22205 | | nitrogen regulation protein NR(II) | 0.45 | 11 |
| Dickeya dianthicola 67-19 | 0.28 | HGI48_RS15225 | | polyphosphate kinase 1 | 0.28 | HGI48_RS21230 | | nitrogen regulation protein NR(II) | 0.76 | 2 |
| Escherichia coli BW25113 | 0.27 | b2501 | ppk | polyphosphate kinase (NCBI) | 0.31 | b3869 | glnL | sensory histidine kinase in two-component regulatory system with GlnG (NCBI) | low | > 76 |
| Escherichia coli ECOR27 | 0.27 | NOLOHH_13450 | ppk1 | polyphosphate kinase 1 | 0.31 | NOLOHH_06235 | glnL | nitrogen regulation protein NR(II) | low | > 75 |
| Escherichia coli ECRC102 | 0.27 | NIAGMN_19570 | ppk1 | polyphosphate kinase 1 | 0.31 | NIAGMN_11860 | glnL | nitrogen regulation protein NR(II) | — | — |
| Escherichia coli BL21 | 0.27 | ECD_02393 | | polyphosphate kinase, component of RNA degradosome | 0.31 | ECD_03754 | | sensory histidine kinase in two-component regulatory system with GlnG | low | > 61 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.27 | OHPLBJKB_01225 | | Polyphosphate kinase | 0.31 | OHPLBJKB_04183 | | Sensory histidine kinase/phosphatase NtrB | low | > 73 |
| Escherichia coli Nissle 1917 | 0.27 | ECOLIN_RS14200 | | polyphosphate kinase 1 | 0.31 | ECOLIN_RS22300 | | nitrogen regulation protein NR(II) | low | > 55 |
| Escherichia coli ECRC99 | 0.27 | KEDOAH_06420 | ppk1 | polyphosphate kinase 1 | 0.31 | KEDOAH_14045 | glnL | nitrogen regulation protein NR(II) | — | — |
| Escherichia coli ECRC62 | 0.27 | BNILDI_12260 | ppk1 | polyphosphate kinase 1 | 0.31 | BNILDI_05295 | glnL | nitrogen regulation protein NR(II) | low | > 75 |
| Escherichia coli ECRC100 | 0.27 | OKFHMN_21800 | ppk1 | polyphosphate kinase 1 | 0.31 | OKFHMN_14105 | glnL | nitrogen regulation protein NR(II) | low | > 80 |
| Escherichia coli ECOR38 | 0.27 | HEPCGN_20965 | ppk1 | polyphosphate kinase 1 | 0.31 | HEPCGN_12735 | glnL | nitrogen regulation protein NR(II) | low | > 87 |
| Escherichia coli ECRC101 | 0.27 | MCAODC_12330 | ppk1 | polyphosphate kinase 1 | 0.31 | MCAODC_04605 | glnL | nitrogen regulation protein NR(II) | low | > 87 |
| Escherichia coli ECRC98 | 0.27 | JDDGAC_25745 | ppk1 | polyphosphate kinase 1 | 0.31 | JDDGAC_17730 | glnL | nitrogen regulation protein NR(II) | low | > 86 |
| Vibrio cholerae E7946 ATCC 55056 | 0.27 | CSW01_03780 | | polyphosphate kinase 1 | 0.29 | CSW01_13860 | | nitrogen regulation protein NR(II) | low | > 62 |
| Escherichia fergusonii Becca | 0.27 | EFB2_01397 | | Polyphosphate kinase | 0.31 | EFB2_04747 | | Sensory histidine kinase/phosphatase NtrB | low | > 86 |
| Rahnella sp. WP5 | 0.27 | EX31_RS22680 | | polyphosphate kinase 1 | 0.29 | EX31_RS15875 | | nitrogen regulation protein NR(II) | low | > 89 |
| Pantoea sp. MT58 | 0.27 | IAI47_05155 | | polyphosphate kinase 1 | 0.30 | IAI47_00455 | | nitrogen regulation protein NR(II) | low | > 76 |
| Serratia liquefaciens MT49 | 0.26 | IAI46_18915 | | polyphosphate kinase 1 | 0.29 | IAI46_24955 | | nitrogen regulation protein NR(II) | low | > 86 |
| Klebsiella michiganensis M5al | 0.26 | BWI76_RS20995 | | RNA degradosome polyphosphate kinase | 0.31 | BWI76_RS00390 | | two-component system sensor histidine kinase NtrB | low | > 92 |
| Enterobacter sp. TBS_079 | 0.26 | MPMX20_03356 | | Polyphosphate kinase | 0.31 | MPMX20_04596 | | Sensory histidine kinase/phosphatase NtrB | 0.61 | 44 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.26 | GFF2167 | | Polyphosphate kinase (EC 2.7.4.1) | 0.31 | GFF2221 | | Nitrogen regulation protein NtrB (EC 2.7.13.3) | low | > 78 |
| Erwinia tracheiphila SCR3 | 0.26 | LU632_RS08260 | ppk1 | polyphosphate kinase 1 | 0.30 | LU632_RS22140 | glnL | nitrogen regulation protein NR(II) | low | > 74 |
| Shewanella amazonensis SB2B | 0.26 | Sama_2011 | | polyphosphate kinase (RefSeq) | 0.28 | Sama_3426 | | nitrogen regulation protein (RefSeq) | low | > 62 |
| Enterobacter asburiae PDN3 | 0.26 | EX28DRAFT_0166 | | polyphosphate kinase 1 | 0.31 | EX28DRAFT_4351 | | Signal transduction histidine kinase, nitrogen specific | low | > 76 |
| Alteromonas macleodii MIT1002 | 0.26 | MIT1002_00872 | | Polyphosphate kinase | 0.28 | MIT1002_03185 | | Nitrogen regulation protein NR(II) | low | > 70 |
| Shewanella loihica PV-4 | 0.25 | Shew_3079 | | polyphosphate kinase (RefSeq) | 0.29 | Shew_3560 | | signal transduction histidine kinase, nitrogen specific, NtrB (RefSeq) | low | > 60 |
| Shewanella sp. ANA-3 | 0.25 | Shewana3_2417 | | polyphosphate kinase (RefSeq) | 0.28 | Shewana3_0259 | | signal transduction histidine kinase, nitrogen specific, NtrB (RefSeq) | low | > 73 |
Not shown: 17 genomes with orthologs for ABZR87_RS14065 only; 2 genomes with orthologs for ABZR87_RS11065 only