| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Bacteroides thetaiotaomicron VPI-5482 | 1.0 | BT0304 | | acriflavine resistance protein A precursor (NCBI ptt file) | 1.0 | BT3821 | | 5,10-methylenetetrahydrofolate reductase (NCBI ptt file) | 0.40 | 10 |
| Bacteroides ovatus ATCC 8483 | 0.91 | BACOVA_00421 | | ATP synthase, Delta/Epsilon chain, long alpha-helix domain protein | 0.93 | BACOVA_03666 | | methylenetetrahydrofolate reductase (NAD(P)H) | low | > 94 |
| Bacteroides stercoris CC31F | 0.78 | HMPREF1181_RS04580 | | efflux RND transporter periplasmic adaptor subunit | 0.91 | HMPREF1181_RS00120 | | methylenetetrahydrofolate reductase [NAD(P)H] | low | > 56 |
| Phocaeicola dorei CL03T12C01 | 0.75 | ABI39_RS18720 | | efflux RND transporter periplasmic adaptor subunit | 0.84 | ABI39_RS09240 | | methylenetetrahydrofolate reductase [NAD(P)H] | low | > 72 |
| Phocaeicola vulgatus CL09T03C04 | 0.74 | HMPREF1058_RS05165 | | efflux RND transporter periplasmic adaptor subunit | 0.84 | HMPREF1058_RS13650 | | methylenetetrahydrofolate reductase [NAD(P)H] | low | > 67 |
| Parabacteroides merdae CL09T00C40 | 0.57 | HMPREF1078_RS00005 | | efflux RND transporter periplasmic adaptor subunit | 0.64 | HMPREF1078_RS07860 | | methylenetetrahydrofolate reductase [NAD(P)H] | low | > 61 |
| Shewanella sp. ANA-3 | 0.31 | Shewana3_1992 | | secretion protein HlyD family protein (RefSeq) | 0.18 | Shewana3_3612 | metF | 5,10-methylenetetrahydrofolate reductase (RefSeq) | low | > 73 |
| Azospirillum brasilense Sp245 | 0.28 | AZOBR_RS26975 | | secretion protein HylD | 0.21 | AZOBR_RS09540 | | 5 10-methylenetetrahydrofolate reductase | low | > 97 |
| Desulfovibrio vulgaris Miyazaki F | 0.26 | DvMF_2164 | | efflux transporter, RND family, MFP subunit (RefSeq) | 0.22 | DvMF_3034 | | 5,10-methylenetetrahydrofolate reductase (RefSeq) | — | — |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.25 | DVU0060 | acrA | efflux transporter, RND family, MFP subunit (TIGR) | 0.19 | DVU0997 | metF | 5,10-methylenetetrahydrofolate reductase (TIGR) | low | > 55 |
| Herbaspirillum seropedicae SmR1 | 0.25 | HSERO_RS02415 | | hemolysin D | 0.18 | HSERO_RS21425 | | 5,10-methylenetetrahydrofolate reductase | low | > 78 |
| Rhizobium sp. OAE497 | 0.24 | ABIE40_RS23880 | | efflux RND transporter periplasmic adaptor subunit | 0.18 | ABIE40_RS11950 | | methylenetetrahydrofolate reductase [NAD(P)H] | low | > 107 |
| Paraburkholderia sabiae LMG 24235 | 0.24 | QEN71_RS03450 | | efflux RND transporter periplasmic adaptor subunit | 0.18 | QEN71_RS28715 | | methylenetetrahydrofolate reductase [NAD(P)H] | low | > 153 |
| Shewanella loihica PV-4 | 0.23 | Shew_3797 | | RND family efflux transporter MFP subunit (RefSeq) | 0.17 | Shew_0522 | metF | 5,10-methylenetetrahydrofolate reductase (RefSeq) | low | > 60 |
| Pseudomonas fluorescens SBW25-INTG | 0.23 | PFLU_RS13285 | | efflux RND transporter periplasmic adaptor subunit | 0.19 | PFLU_RS28165 | | methylenetetrahydrofolate reductase [NAD(P)H] | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.23 | PFLU_RS13285 | | efflux RND transporter periplasmic adaptor subunit | 0.19 | PFLU_RS28165 | | methylenetetrahydrofolate reductase [NAD(P)H] | low | > 109 |
| Pseudomonas simiae WCS417 | 0.23 | PS417_12590 | | RND transporter | 0.19 | PS417_26510 | | 5,10-methylenetetrahydrofolate reductase | — | — |
| Dyella japonica UNC79MFTsu3.2 | 0.22 | ABZR86_RS07565 | | efflux RND transporter periplasmic adaptor subunit | 0.19 | ABZR86_RS11570 | | methylenetetrahydrofolate reductase [NAD(P)H] | low | > 74 |
| Paraburkholderia graminis OAS925 | 0.22 | ABIE53_005787 | | membrane fusion protein (multidrug efflux system) | 0.18 | ABIE53_000061 | | methylenetetrahydrofolate reductase (NADPH) | 0.29 | 10 |
| Rhodanobacter sp. FW510-T8 | 0.22 | OKGIIK_09165 | acrA | efflux transporter periplasmic adaptor subunit | 0.18 | OKGIIK_11830 | metF | methylenetetrahydrofolate reductase [NAD(P)H] | low | > 52 |
| Sinorhizobium meliloti 1021 | 0.21 | SMc03972 | | multidrug efflux system transmembrane protein | 0.18 | SMc01843 | | 5,10-methylenetetrahydrofolate reductase | low | > 103 |
| Pseudomonas fluorescens GW456-L13 | 0.21 | PfGW456L13_2955 | | RND efflux system, membrane fusion protein CmeA | 0.19 | PfGW456L13_1050 | | 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) | low | > 87 |
| Rahnella sp. WP5 | 0.21 | EX31_RS00465 | | efflux RND transporter periplasmic adaptor subunit | 0.18 | EX31_RS14205 | | methylenetetrahydrofolate reductase | low | > 89 |
| Pseudomonas fluorescens FW300-N2C3 | 0.21 | AO356_28725 | | RND transporter | 0.19 | AO356_13605 | | 5,10-methylenetetrahydrofolate reductase | — | — |
| Rhodanobacter denitrificans FW104-10B01 | 0.21 | LRK54_RS02095 | | efflux RND transporter periplasmic adaptor subunit | 0.18 | LRK54_RS12030 | | methylenetetrahydrofolate reductase [NAD(P)H] | low | > 59 |
| Rhodanobacter denitrificans MT42 | 0.21 | LRK55_RS01870 | | efflux RND transporter periplasmic adaptor subunit | 0.18 | LRK55_RS11765 | | methylenetetrahydrofolate reductase [NAD(P)H] | low | > 63 |
| Klebsiella michiganensis M5al | 0.21 | BWI76_RS27690 | | MexE family multidrug efflux RND transporter periplasmic adaptor subunit | 0.19 | BWI76_RS00805 | | 5,10-methylenetetrahydrofolate reductase | low | > 92 |
| Pseudomonas sp. S08-1 | 0.21 | OH686_07375 | | RND efflux system, membrane fusion protein | 0.18 | OH686_10820 | | methylenetetrahydrofolate reductase [NAD(P)H] | low | > 80 |
| Pantoea sp. MT58 | 0.21 | IAI47_14510 | | efflux RND transporter periplasmic adaptor subunit | 0.18 | IAI47_00890 | | methylenetetrahydrofolate reductase | low | > 76 |
| Variovorax sp. OAS795 | 0.21 | ABID97_RS00320 | | efflux RND transporter periplasmic adaptor subunit | 0.16 | ABID97_RS25015 | | methylenetetrahydrofolate reductase [NAD(P)H] | low | > 91 |
| Pseudomonas fluorescens FW300-N2E3 | 0.21 | AO353_26840 | | RND transporter | 0.19 | AO353_08015 | | 5,10-methylenetetrahydrofolate reductase | low | > 101 |
| Escherichia fergusonii Becca | 0.21 | EFB2_00559 | | Multidrug export protein AcrE | 0.17 | EFB2_04672 | | 5,10-methylenetetrahydrofolate reductase | low | > 86 |
| Alteromonas macleodii MIT1002 | 0.21 | MIT1002_00134 | | Acriflavine resistance protein A precursor | 0.18 | MIT1002_03670 | | 5,10-methylenetetrahydrofolate reductase | low | > 70 |
| Kangiella aquimarina DSM 16071 | 0.21 | B158DRAFT_0734 | | RND family efflux transporter, MFP subunit | 0.15 | B158DRAFT_2461 | | 5,10-methylenetetrahydrofolate reductase (NAD(P)) (EC 1.5.1.20) | low | > 40 |
| Dickeya dadantii 3937 | 0.21 | DDA3937_RS14125 | | efflux RND transporter periplasmic adaptor subunit | 0.18 | DDA3937_RS00960 | | methylenetetrahydrofolate reductase | low | > 74 |
| Sphingomonas koreensis DSMZ 15582 | 0.20 | Ga0059261_0560 | | RND family efflux transporter, MFP subunit | 0.18 | Ga0059261_0992 | | 5,10-methylenetetrahydrofolate reductase, prokaryotic form | low | > 68 |
| Rhodospirillum rubrum S1H | 0.20 | Rru_A1117 | | Secretion protein HlyD (NCBI) | 0.17 | Rru_A1530 | | 5,10-methylenetetrahydrofolate reductase (NCBI) | low | > 58 |
| Shewanella amazonensis SB2B | 0.20 | Sama_3553 | | multidrug resistance protein AcrA/AcrE family (RefSeq) | 0.17 | Sama_3169 | metF | 5,10-methylenetetrahydrofolate reductase (RefSeq) | low | > 62 |
| Pseudomonas fluorescens FW300-N2E2 | 0.20 | Pf6N2E2_1660 | | RND efflux system, membrane fusion protein CmeA | 0.19 | Pf6N2E2_4638 | | 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) | low | > 103 |
| Pseudomonas fluorescens FW300-N1B4 | 0.20 | Pf1N1B4_4773 | | RND efflux system, membrane fusion protein CmeA | 0.19 | Pf1N1B4_2384 | | 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.20 | RR42_RS32415 | | hemolysin D | 0.21 | RR42_RS01385 | | 5,10-methylenetetrahydrofolate reductase | low | > 128 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.20 | GFF3839 | | RND efflux system, membrane fusion protein CmeA | 0.15 | GFF1692 | | 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) | — | — |
| Ralstonia solanacearum PSI07 | 0.20 | RPSI07_RS23900 | | efflux RND transporter periplasmic adaptor subunit | 0.21 | RPSI07_RS23495 | | methylenetetrahydrofolate reductase [NAD(P)H] | low | > 81 |
| Ralstonia solanacearum UW163 | 0.20 | UW163_RS04130 | | MexE family multidrug efflux RND transporter periplasmic adaptor subunit | 0.21 | UW163_RS03705 | | methylenetetrahydrofolate reductase [NAD(P)H] | — | — |
| Ralstonia solanacearum GMI1000 | 0.20 | RS_RS00050 | | MexE family multidrug efflux RND transporter periplasmic adaptor subunit | 0.21 | RS_RS00460 | | methylenetetrahydrofolate reductase [NAD(P)H] | low | > 80 |
| Ralstonia solanacearum IBSBF1503 | 0.20 | RALBFv3_RS09450 | | MexE family multidrug efflux RND transporter periplasmic adaptor subunit | 0.21 | RALBFv3_RS09875 | | methylenetetrahydrofolate reductase [NAD(P)H] | low | > 76 |
| Pseudomonas sp. RS175 | 0.20 | PFR28_02462 | | Multidrug resistance protein MexA | 0.19 | PFR28_04202 | | 5,10-methylenetetrahydrofolate reductase | low | > 88 |
| Acinetobacter radioresistens SK82 | 0.20 | MPMX26_00690 | | Multidrug efflux pump subunit AcrA | 0.16 | MPMX26_01002 | | 5,10-methylenetetrahydrofolate reductase | low | > 36 |
| Escherichia coli Nissle 1917 | 0.20 | ECOLIN_RS07785 | | efflux RND transporter periplasmic adaptor subunit | 0.17 | ECOLIN_RS22760 | | methylenetetrahydrofolate reductase | low | > 52 |
| Variovorax sp. SCN45 | 0.20 | GFF3726 | | RND efflux system, membrane fusion protein | 0.16 | GFF2055 | | 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) | low | > 127 |
| Pseudomonas putida KT2440 | 0.20 | PP_3455 | | Multidrug efflux RND membrane fusion protein | 0.19 | PP_4977 | | 5,10-methylenetetrahydrofolate reductase | 0.20 | 34 |
| Serratia liquefaciens MT49 | 0.20 | IAI46_12715 | | efflux RND transporter periplasmic adaptor subunit | 0.17 | IAI46_24530 | | methylenetetrahydrofolate reductase | low | > 86 |
| Dechlorosoma suillum PS | 0.20 | Dsui_3181 | | RND family efflux transporter, MFP subunit | 0.19 | Dsui_0640 | | 5,10-methylenetetrahydrofolate reductase | — | — |
| Escherichia coli ECOR38 | 0.20 | HEPCGN_25700 | acrA | efflux transporter periplasmic adaptor subunit | 0.17 | HEPCGN_12310 | metF | methylenetetrahydrofolate reductase | low | > 85 |
| Azospirillum sp. SherDot2 | 0.20 | MPMX19_05883 | | Multidrug resistance protein MexA | 0.21 | MPMX19_00635 | | 5,10-methylenetetrahydrofolate reductase | low | > 112 |
| Magnetospirillum magneticum AMB-1 | 0.20 | AMB_RS17320 | | MexE family multidrug efflux RND transporter periplasmic adaptor subunit | 0.17 | AMB_RS02230 | | methylenetetrahydrofolate reductase | — | — |
| Pseudomonas stutzeri RCH2 | 0.20 | Psest_2145 | | RND family efflux transporter, MFP subunit | 0.18 | Psest_0313 | | 5,10-methylenetetrahydrofolate reductase, prokaryotic form | low | > 67 |
| Enterobacter sp. TBS_079 | 0.20 | MPMX20_04174 | | Multidrug export protein AcrE | 0.18 | MPMX20_04529 | | 5,10-methylenetetrahydrofolate reductase | low | > 85 |
| Escherichia coli ECRC98 | 0.20 | JDDGAC_21285 | acrE | multidrug efflux RND transporter periplasmic adaptor subunit AcrE | 0.17 | JDDGAC_17290 | metF | methylenetetrahydrofolate reductase | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.20 | OHPLBJKB_00440 | | Multidrug export protein AcrE | 0.17 | OHPLBJKB_04109 | | 5,10-methylenetetrahydrofolate reductase | low | > 73 |
| Escherichia coli ECOR27 | 0.20 | NOLOHH_09445 | acrE | multidrug efflux RND transporter periplasmic adaptor subunit AcrE | 0.17 | NOLOHH_05810 | metF | methylenetetrahydrofolate reductase | low | > 57 |
| Pseudomonas syringae pv. syringae B728a | 0.20 | Psyr_2283 | | Secretion protein HlyD | 0.19 | Psyr_0459 | | 5,10-methylenetetrahydrofolate reductase | low | > 86 |
| Escherichia coli BW25113 | 0.20 | b3265 | acrE | cytoplasmic membrane lipoprotein (NCBI) | 0.17 | b3941 | metF | 5,10-methylenetetrahydrofolate reductase (NCBI) | low | > 76 |
| Escherichia coli ECRC102 | 0.20 | NIAGMN_15420 | acrE | multidrug efflux RND transporter periplasmic adaptor subunit AcrE | 0.17 | NIAGMN_11420 | metF | methylenetetrahydrofolate reductase | — | — |
| Escherichia coli ECRC99 | 0.20 | KEDOAH_10490 | acrE | multidrug efflux RND transporter periplasmic adaptor subunit AcrE | 0.17 | KEDOAH_14495 | metF | methylenetetrahydrofolate reductase | — | — |
| Escherichia coli ECRC101 | 0.20 | OKFHMN_17660 | acrE | multidrug efflux RND transporter periplasmic adaptor subunit AcrE | 0.17 | OKFHMN_13665 | metF | methylenetetrahydrofolate reductase | — | — |
| Escherichia coli ECRC101 | 0.20 | MCAODC_08180 | acrE | multidrug efflux RND transporter periplasmic adaptor subunit AcrE | 0.17 | MCAODC_04165 | metF | methylenetetrahydrofolate reductase | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.20 | Psyr_2283 | | Secretion protein HlyD | 0.19 | Psyr_0459 | | 5,10-methylenetetrahydrofolate reductase | low | > 86 |
| Escherichia coli ECRC62 | 0.20 | BNILDI_02075 | acrE | multidrug efflux RND transporter periplasmic adaptor subunit AcrE | 0.17 | BNILDI_05725 | metF | methylenetetrahydrofolate reductase | — | — |
| Enterobacter asburiae PDN3 | 0.19 | EX28DRAFT_3318 | | RND family efflux transporter, MFP subunit | 0.18 | EX28DRAFT_4413 | | 5,10-methylenetetrahydrofolate reductase, prokaryotic form | low | > 76 |
| Ralstonia sp. UNC404CL21Col | 0.19 | ABZR87_RS05310 | | efflux RND transporter periplasmic adaptor subunit | 0.21 | ABZR87_RS04865 | | methylenetetrahydrofolate reductase [NAD(P)H] | low | > 80 |
| Escherichia coli BL21 | 0.19 | ECD_03123 | | cytoplasmic membrane lipoprotein | 0.17 | ECD_03827 | | 5,10-methylenetetrahydrofolate reductase | low | > 60 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.19 | GFF2117 | | RND efflux system, membrane fusion protein CmeA | 0.18 | GFF2329 | | 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) | low | > 78 |
| Acidovorax sp. GW101-3H11 | 0.19 | Ac3H11_4449 | | RND efflux system, membrane fusion protein CmeA | 0.18 | Ac3H11_3045 | | 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) | low | > 79 |
| Dickeya dianthicola ME23 | 0.19 | DZA65_RS06120 | | efflux RND transporter periplasmic adaptor subunit | 0.17 | DZA65_RS21460 | | methylenetetrahydrofolate reductase | low | > 75 |
| Dickeya dianthicola 67-19 | 0.19 | HGI48_RS05795 | | efflux RND transporter periplasmic adaptor subunit | 0.17 | HGI48_RS20415 | | methylenetetrahydrofolate reductase | low | > 71 |
| Agrobacterium fabrum C58 | 0.19 | Atu3203 | | RND multidrug efflux membrane permease | 0.16 | Atu2123 | | methylenetetrahydrofolate reductase | low | > 89 |
| Pectobacterium carotovorum WPP14 | 0.18 | HER17_RS15735 | | efflux RND transporter periplasmic adaptor subunit | 0.18 | HER17_RS00950 | | methylenetetrahydrofolate reductase | low | > 75 |
| Erwinia tracheiphila SCR3 | 0.18 | LU632_RS18180 | | efflux RND transporter periplasmic adaptor subunit | 0.18 | LU632_RS19630 | metF | methylenetetrahydrofolate reductase | — | — |
| Marinobacter adhaerens HP15 | 0.17 | HP15_932 | | efflux transporter, RND family, MFP subunit | 0.19 | HP15_2917 | | 5,10-methylenetetrahydrofolate reductase-like protein | low | > 73 |
| Dinoroseobacter shibae DFL-12 | 0.08 | Dshi_3902 | | efflux transporter, RND family, MFP subunit (RefSeq) | 0.18 | Dshi_2080 | | 5,10-methylenetetrahydrofolate reductase (RefSeq) | — | — |
Not shown: 0 genomes with orthologs for BT0304 only; 19 genomes with orthologs for BT3821 only