Conservation of cofitness between SO4408 and SO2488 in Shewanella oneidensis MR-1

68 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella oneidensis MR-1 1.0 SO4408 bipA virulence regulator BipA (NCBI ptt file) 1.0 SO2488 pgl 6-phosphogluconolactonase (NCBI ptt file) 0.41 3
Shewanella sp. ANA-3 0.98 Shewana3_0301 GTP-binding protein TypA (RefSeq) 0.99 Shewana3_2150 6-phosphogluconolactonase (RefSeq) low > 73
Shewanella amazonensis SB2B 0.93 Sama_3415 virulence regulator BipA (RefSeq) 0.77 Sama_1811 6-phosphogluconolactonase (RefSeq) — —
Shewanella loihica PV-4 0.92 Shew_3553 GTP-binding protein TypA (RefSeq) 0.82 Shew_2047 6-phosphogluconolactonase (RefSeq) — —
Vibrio cholerae E7946 ATCC 55056 0.83 CSW01_13840 translational GTPase TypA 0.12 CSW01_18630 6-phosphogluconolactonase 0.39 20
Alteromonas macleodii MIT1002 0.82 MIT1002_03181 hypothetical protein 0.42 MIT1002_02406 6-phosphogluconolactonase low > 70
Marinobacter adhaerens HP15 0.71 HP15_429 GTP-binding protein TypA 0.37 HP15_2178 6-phosphogluconolactonase 0.36 55
Xanthomonas campestris pv. campestris strain 8004 0.71 Xcc-8004.4106.1 GTP-binding protein TypA/BipA 0.24 Xcc-8004.2448.1 6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type — —
Pseudomonas segetis P6 0.71 ACVTMO_RS21230 typA translational GTPase TypA 0.35 ACVTMO_RS14020 pgl 6-phosphogluconolactonase — —
Dyella japonica UNC79MFTsu3.2 0.71 ABZR86_RS20640 translational GTPase TypA 0.34 ABZR86_RS14695 6-phosphogluconolactonase — —
Lysobacter sp. OAE881 0.71 ABIE51_RS05990 translational GTPase TypA 0.28 ABIE51_RS01615 6-phosphogluconolactonase — —
Rhodanobacter denitrificans MT42 0.71 LRK55_RS00550 translational GTPase TypA 0.30 LRK55_RS07605 6-phosphogluconolactonase — —
Rhodanobacter denitrificans FW104-10B01 0.71 LRK54_RS00775 translational GTPase TypA 0.30 LRK54_RS07875 6-phosphogluconolactonase — —
Pseudomonas aeruginosa PUPa3 0.71 DQ20_RS50685 typA;go_function=GTP translational GTPase TypA 0.33 DQ20_RS34510 pgl;go_function=6-phosphogluconolactonase 6-phosphogluconolactonase low > 101
Pseudomonas aeruginosa MRSN321 0.71 DY961_RS11410 typA;go_function=GTP translational GTPase TypA 0.33 DY961_RS01025 pgl;go_function=6-phosphogluconolactonase 6-phosphogluconolactonase low > 100
Pseudomonas aeruginosa PA14 0.71 IKLFDK_27935 translational GTPase TypA 0.33 IKLFDK_16170 6-phosphogluconolactonase — —
Rhodanobacter sp. FW510-T8 0.70 OKGIIK_06470 typA translational GTPase TypA 0.32 OKGIIK_14365 6-phosphogluconolactonase — —
Rhodanobacter sp000427505 FW510-R12 0.70 LRK53_RS09360 translational GTPase TypA 0.33 LRK53_RS00670 6-phosphogluconolactonase — —
Pseudomonas stutzeri RCH2 0.70 Psest_3926 GTP-binding protein TypA/BipA 0.34 Psest_0853 6-phosphogluconolactonase low > 67
Pseudomonas sp. S08-1 0.69 OH686_10610 GTP-binding protein TypA/BipA 0.36 OH686_02430 6-phosphogluconolactonase , eukaryotic type low > 80
Pseudomonas putida KT2440 0.69 PP_5044 ribosome associated GTPase 0.33 PP_1023 6-phosphogluconolactonase — —
Pseudomonas lactucae CFBP13502 0.68 GEMAOFIL_00555 GTP-binding protein TypA/BipA 0.37 GEMAOFIL_04557 6-phosphogluconolactonase — —
Pseudomonas sp. RS175 0.68 PFR28_04951 GTP-binding protein TypA/BipA 0.34 PFR28_00574 6-phosphogluconolactonase — —
Pseudomonas fluorescens FW300-N2C3 0.68 AO356_09695 GTP-binding protein TypA 0.36 AO356_05155 6-phosphogluconolactonase — —
Pseudomonas sp. SVBP6 0.68 COO64_RS13355 typA translational GTPase TypA 0.32 COO64_RS04595 pgl 6-phosphogluconolactonase — —
Pseudomonas fluorescens FW300-N2E2 0.68 Pf6N2E2_3818 GTP-binding protein TypA/BipA 0.36 Pf6N2E2_2884 6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type — —
Pseudomonas fluorescens SBW25 0.68 PFLU_RS01720 translational GTPase TypA 0.35 PFLU_RS23720 6-phosphogluconolactonase — —
Pseudomonas syringae pv. syringae B728a 0.68 Psyr_4815 Small GTP-binding protein domain:GTP-binding protein TypA 0.34 Psyr_1121 6-phosphogluconolactonase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.68 Psyr_4815 Small GTP-binding protein domain:GTP-binding protein TypA 0.34 Psyr_1121 6-phosphogluconolactonase — —
Pseudomonas fluorescens SBW25-INTG 0.68 PFLU_RS01720 translational GTPase TypA 0.35 PFLU_RS23720 6-phosphogluconolactonase — —
Pseudomonas fluorescens GW456-L13 0.68 PfGW456L13_340 GTP-binding protein TypA/BipA 0.35 PfGW456L13_1902 6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type — —
Pseudomonas sp. DMC3 0.68 GFF4075 GTP-binding protein TypA/BipA 0.35 GFF5139 6-phosphogluconolactonase — —
Pseudomonas sp. BP01 0.68 JOY50_RS09470 typA translational GTPase TypA 0.32 JOY50_RS11455 pgl 6-phosphogluconolactonase low > 84
Pseudomonas simiae WCS417 0.68 PS417_01665 GTP-binding protein TypA 0.37 PS417_22105 6-phosphogluconolactonase — —
Pseudomonas fluorescens FW300-N2E3 0.68 AO353_12180 GTP-binding protein TypA 0.37 AO353_03355 6-phosphogluconolactonase — —
Ralstonia sp. UNC404CL21Col 0.65 ABZR87_RS11245 translational GTPase TypA 0.32 ABZR87_RS22910 6-phosphogluconolactonase low > 80
Paraburkholderia sabiae LMG 24235 0.65 QEN71_RS23065 translational GTPase TypA 0.25 QEN71_RS03325 6-phosphogluconolactonase — —
Cupriavidus basilensis FW507-4G11 0.65 RR42_RS12810 GTP-binding protein 0.26 RR42_RS37400 6-phosphogluconolactonase — —
Burkholderia phytofirmans PsJN 0.65 BPHYT_RS08105 GTP-binding protein 0.26 BPHYT_RS05015 6-phosphogluconolactonase — —
Ralstonia solanacearum GMI1000 0.64 RS_RS06495 translational GTPase TypA 0.28 RS_RS24610 6-phosphogluconolactonase — —
Ralstonia solanacearum PSI07 0.64 RPSI07_RS17640 translational GTPase TypA 0.28 RPSI07_RS07310 6-phosphogluconolactonase low > 81
Ralstonia solanacearum UW163 0.64 UW163_RS13160 translational GTPase TypA 0.28 UW163_RS17135 6-phosphogluconolactonase — —
Ralstonia solanacearum IBSBF1503 0.64 RALBFv3_RS15715 translational GTPase TypA 0.28 RALBFv3_RS16395 6-phosphogluconolactonase — —
Methylophilus sp. DMC18 0.64 GFF1282 GTP-binding protein TypA/BipA 0.17 GFF1066 Glucosamine-6-phosphate deaminase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.59 GFF4346 GTP-binding protein TypA/BipA 0.27 GFF5494 6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type — —
Sphingomonas koreensis DSMZ 15582 0.55 Ga0059261_0817 GTP-binding protein TypA/BipA 0.24 Ga0059261_0353 6-phosphogluconolactonase — —
Pseudomonas fluorescens FW300-N1B4 0.54 Pf1N1B4_1601 GTP-binding protein TypA/BipA 0.35 Pf1N1B4_588 6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type — —
Agrobacterium fabrum C58 0.54 Atu2663 GTP-binding tyrosin phosphorylated protein 0.30 Atu0599 6-phosphogluconolactonase — —
Rhizobium sp. OAE497 0.54 ABIE40_RS18125 translational GTPase TypA 0.32 ABIE40_RS03195 6-phosphogluconolactonase — —
Sinorhizobium meliloti 1021 0.53 SMc03242 GTP-binding protein 0.31 SMc03069 6-phosphogluconolactonase low > 103
Sphingobium sp. HT1-2 0.53 GFF515 GTP-binding protein TypA/BipA 0.42 GFF1583 6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type — —
Synechococcus elongatus PCC 7942 0.53 Synpcc7942_1525 typA GTP-binding protein TypA 0.16 Synpcc7942_0529 nagB 6-phosphogluconolactonase low > 38
Xanthobacter sp. DMC5 0.53 GFF4181 GTP-binding protein TypA/BipA 0.33 GFF3232 6-phosphogluconolactonase — —
Bosea sp. OAE506 0.52 ABIE41_RS04255 translational GTPase TypA 0.24 ABIE41_RS23510 6-phosphogluconolactonase — —
Phaeobacter inhibens DSM 17395 0.52 PGA1_c15300 GTP-binding protein TypA 0.23 PGA1_c15170 6-phosphogluconolactonase Pgl — —
Dinoroseobacter shibae DFL-12 0.51 Dshi_0019 GTP-binding protein TypA (RefSeq) 0.25 Dshi_1683 6-phosphogluconolactonase (RefSeq) low > 64
Bacteroides thetaiotaomicron VPI-5482 0.51 BT2787 GTP-binding elongation factor family protein TypA/BipA (NCBI ptt file) 0.14 BT1220 6-phosphogluconolactonase (NCBI ptt file) low > 81
Bacteroides stercoris CC31F 0.51 HMPREF1181_RS01180 translational GTPase TypA 0.13 HMPREF1181_RS12515 6-phosphogluconolactonase low > 56
Brevundimonas sp. GW460-12-10-14-LB2 0.50 A4249_RS13585 translational GTPase TypA 0.23 A4249_RS10730 6-phosphogluconolactonase — —
Phocaeicola dorei CL03T12C01 0.50 ABI39_RS06695 translational GTPase TypA 0.15 ABI39_RS14360 6-phosphogluconolactonase low > 72
Mucilaginibacter yixingensis YX-36 DSM 26809 0.50 ABZR88_RS00415 translational GTPase TypA 0.18 ABZR88_RS02980 6-phosphogluconolactonase — —
Phocaeicola vulgatus CL09T03C04 0.50 HMPREF1058_RS10055 translational GTPase TypA 0.14 HMPREF1058_RS18035 6-phosphogluconolactonase low > 67
Caulobacter crescentus NA1000 0.50 CCNA_00778 GTP-binding protein TypA/BipA 0.22 CCNA_02135 6-phosphogluconolactonase low > 66
Caulobacter crescentus NA1000 Δfur 0.50 CCNA_00778 GTP-binding protein TypA/BipA 0.22 CCNA_02135 6-phosphogluconolactonase low > 67
Pedobacter sp. GW460-11-11-14-LB5 0.49 CA265_RS23750 translational GTPase TypA 0.14 CA265_RS09815 6-phosphogluconolactonase — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.49 Echvi_4063 GTP-binding protein TypA/BipA 0.18 Echvi_2863 6-phosphogluconolactonase — —
Desulfovibrio vulgaris Hildenborough JW710 0.49 DVU2231 typA GTP-binding protein TypA (TIGR) 0.20 DVU2313 pgl 6-phosphogluconolactonase (TIGR) low > 55
Desulfovibrio vulgaris Miyazaki F 0.48 DvMF_0822 GTP-binding protein TypA (RefSeq) 0.18 DvMF_3178 6-phosphogluconolactonase (RefSeq) low > 51
Mycobacterium tuberculosis H37Rv 0.43 Rv1165 Possible GTP-binding translation elongation factor TypA (tyrosine phosphorylated protein A) (GTP-binding protein) 0.16 Rv1445c Probable 6-phosphogluconolactonase DevB (6PGL) — —

Not shown: 52 genomes with orthologs for SO4408 only; 0 genomes with orthologs for SO2488 only