Conservation of cofitness between SO1895 and SO1894 in Shewanella oneidensis MR-1

71 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella oneidensis MR-1 1.0 SO1895 enoyl-CoA hydratase/isomerase family protein (NCBI ptt file) 1.0 SO1894 acetyl-CoA carboxylase, biotin carboxylase, putative (NCBI ptt file) 0.81 1
Shewanella sp. ANA-3 0.93 Shewana3_1670 methylglutaconyl-CoA hydratase (RefSeq) 0.93 Shewana3_1669 3-methylcrotonoyl-CoA carboxylase, alpha subunit (RefSeq) 0.80 2
Shewanella loihica PV-4 0.73 Shew_2572 enoyl-CoA hydratase/isomerase (RefSeq) 0.76 Shew_2573 carbamoyl-phosphate synthase L chain, ATP-binding (RefSeq) 0.72 5
Shewanella amazonensis SB2B 0.60 Sama_1360 enoyl-CoA hydratase/isomerase (RefSeq) 0.68 Sama_1359 3-methylcrotonyl-CoA carboxylase, alpha (biotin-containing) subunit (EC 6.4.1.4) (from data) 0.43 27
Kangiella aquimarina DSM 16071 0.43 B158DRAFT_2508 Enoyl-CoA hydratase/carnithine racemase 0.48 B158DRAFT_2507 Acetyl/propionyl-CoA carboxylase, alpha subunit
Pseudomonas stutzeri RCH2 0.41 Psest_1082 Enoyl-CoA hydratase/carnithine racemase 0.43 Psest_1080 Acetyl/propionyl-CoA carboxylase, alpha subunit 0.68 1
Alteromonas macleodii MIT1002 0.41 MIT1002_01667 putative enoyl-CoA hydratase echA8 0.48 MIT1002_01666 Acetyl-/propionyl-coenzyme A carboxylase alpha chain 0.76 4
Pseudomonas sp. S08-1 0.41 OH686_00845 Methylglutaconyl-CoA hydratase 0.42 OH686_00840 Methylcrotonyl-CoA carboxylase biotin-containing subunit 0.61 16
Pseudomonas fluorescens FW300-N2E2 0.40 Pf6N2E2_2193 Methylglutaconyl-CoA hydratase (EC 4.2.1.18) (from data) 0.43 Pf6N2E2_2194 3-methylcrotonyl-CoA carboxylase, alpha (biotin-containing) subunit (EC 6.4.1.4) (from data) 0.75 3
Pseudomonas fluorescens FW300-N2C3 0.40 AO356_01590 Methylglutaconyl-CoA hydratase (EC 4.2.1.18) (from data) 0.43 AO356_01595 3-methylcrotonyl-CoA carboxylase, alpha (biotin-containing) subunit (EC 6.4.1.4) (from data) 0.68 3
Pseudomonas sp. DMC3 0.40 GFF1472 1,4-dihydroxy-2-naphthoyl-CoA synthase 0.43 GFF1471 Acetyl-/propionyl-coenzyme A carboxylase alpha chain low > 89
Azospirillum sp. SherDot2 0.40 MPMX19_03939 Enoyl-CoA-hydratase 0.45 MPMX19_03940 Acetyl-/propionyl-coenzyme A carboxylase alpha chain low > 112
Pseudomonas sp. BP01 0.40 JOY50_RS06800 gamma-carboxygeranoyl-CoA hydratase 0.42 JOY50_RS06805 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha low > 84
Magnetospirillum magneticum AMB-1 0.40 AMB_RS03470 enoyl-CoA hydratase 0.43 AMB_RS03465 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha low > 64
Marinobacter adhaerens HP15 0.39 HP15_1003 enoyl-CoA hydratase/isomerase 0.50 HP15_4179 methylcrotonyl-CoA carboxylase, alpha subunit
Ralstonia sp. UNC404CL21Col 0.39 ABZR87_RS06270 enoyl-CoA hydratase/isomerase family protein 0.43 ABZR87_RS06260 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha 0.61 2
Pseudomonas putida KT2440 0.39 PP_4066 methylglutaconyl-CoA hydratase 0.43 PP_4067 methylcrotonyl-CoA carboxylase biotin-containing subunit alpha 0.77 1
Pseudomonas fluorescens FW300-N2E3 0.39 AO353_20340 gamma-carboxygeranoyl-CoA hydratase 0.43 AO353_20335 3-methylcrotonyl-CoA carboxylase 0.37 24
Pseudomonas sp. RS175 0.39 PFR28_01258 1,4-dihydroxy-2-naphthoyl-CoA synthase 0.42 PFR28_01257 Acetyl-/propionyl-coenzyme A carboxylase alpha chain 0.68 3
Pseudomonas aeruginosa PUPa3 0.39 DQ20_RS38570 gamma-carboxygeranoyl-CoA hydratase 0.43 DQ20_RS38565 liuD;inference=COORDINATES methylcrotonyl-CoA carboxylase subunit alpha 0.46 6
Pseudomonas fluorescens GW456-L13 0.39 PfGW456L13_2589 Methylglutaconyl-CoA hydratase (EC 4.2.1.18) 0.43 PfGW456L13_2588 Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4) 0.53 20
Dechlorosoma suillum PS 0.39 Dsui_0981 enoyl-CoA hydratase/carnithine racemase 0.43 Dsui_0982 acetyl/propionyl-CoA carboxylase, alpha subunit low > 51
Pseudomonas aeruginosa MRSN321 0.39 DY961_RS16250 gamma-carboxygeranoyl-CoA hydratase 0.42 DY961_RS16245 liuD;inference=COORDINATES methylcrotonyl-CoA carboxylase subunit alpha 0.22 55
Pseudomonas aeruginosa PA14 0.39 IKLFDK_09840 gamma-carboxygeranoyl-CoA hydratase 0.43 IKLFDK_09835 methylcrotonyl-CoA carboxylase subunit alpha low > 98
Pseudomonas syringae pv. syringae B728a ΔmexB 0.39 Psyr_2468 Enoyl-CoA hydratase/isomerase 0.43 Psyr_2467 3-methylcrotonoyl-CoA carboxylase, alpha subunit low > 86
Pseudomonas segetis P6 0.39 MPMX49_02360 1,4-dihydroxy-2-naphthoyl-CoA synthase 0.44 MPMX49_02359 Acetyl-/propionyl-coenzyme A carboxylase alpha chain
Pseudomonas syringae pv. syringae B728a 0.39 Psyr_2468 Enoyl-CoA hydratase/isomerase 0.43 Psyr_2467 3-methylcrotonoyl-CoA carboxylase, alpha subunit low > 86
Rhodospirillum rubrum S1H 0.39 Rru_A1942 Enoyl-CoA hydratase/isomerase (NCBI) 0.36 Rru_A1941 acyl-CoA carboxylase alpha chain (NCBI) low > 58
Pseudomonas fluorescens FW300-N1B4 0.38 Pf1N1B4_3985 Methylglutaconyl-CoA hydratase (EC 4.2.1.18) 0.43 Pf1N1B4_3984 3-methylcrotonyl-CoA carboxylase, alpha (biotin-containing) subunit (EC 6.4.1.4) (from data) 0.42 1
Cupriavidus basilensis FW507-4G11 0.38 RR42_RS26900 enoyl-CoA hydratase 0.43 RR42_RS26895 3-methylcrotonyl-CoA carboxylase 0.69 2
Pseudomonas sp. SVBP6 0.38 COO64_RS24745 gamma-carboxygeranoyl-CoA hydratase 0.43 COO64_RS24740 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha 0.34 91
Xanthobacter sp. DMC5 0.38 GFF3792 Enoyl-CoA-hydratase 0.42 GFF3791 Acetyl-/propionyl-coenzyme A carboxylase alpha chain
Pseudomonas simiae WCS417 0.38 PS417_17025 gamma-carboxygeranoyl-CoA hydratase 0.43 PS417_17030 3-methylcrotonyl-CoA carboxylase
Lysobacter sp. OAE881 0.38 ABIE51_RS13190 enoyl-CoA hydratase-related protein 0.42 ABIE51_RS13200 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha
Acidovorax sp. GW101-3H11 0.38 Ac3H11_3014 Methylglutaconyl-CoA hydratase (EC 4.2.1.18) 0.41 Ac3H11_3016 Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4)
Pseudomonas orientalis W4I3 0.38 QF045_RS18705 gamma-carboxygeranoyl-CoA hydratase 0.42 QF045_RS18710 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha 0.48 21
Pseudomonas lactucae CFBP13502 0.37 GEMAOFIL_03715 1,4-dihydroxy-2-naphthoyl-CoA synthase 0.41 GEMAOFIL_03716 Acetyl-/propionyl-coenzyme A carboxylase alpha chain low > 96
Ralstonia solanacearum GMI1000 0.37 RS_RS01310 enoyl-CoA hydratase 0.43 RS_RS01300 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha low > 80
Ralstonia solanacearum PSI07 0.37 RPSI07_RS22845 enoyl-CoA hydratase 0.44 RPSI07_RS22860 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha low > 81
Paraburkholderia sabiae LMG 24235 0.37 QEN71_RS12860 enoyl-CoA hydratase/isomerase family protein 0.42 QEN71_RS12855 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha 0.97 1
Ralstonia solanacearum UW163 0.37 UW163_RS03110 enoyl-CoA hydratase 0.44 UW163_RS03120 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha
Azospirillum brasilense Sp245 0.37 AZOBR_RS22290 enoyl-CoA hydratase 0.45 AZOBR_RS22285 3-methylcrotonyl-CoA carboxylase subunit alpha
Ralstonia solanacearum IBSBF1503 0.37 RALBFv3_RS10470 enoyl-CoA hydratase 0.44 RALBFv3_RS10460 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha low > 76
Paraburkholderia graminis OAS925 0.37 ABIE53_005467 methylglutaconyl-CoA hydratase 0.41 ABIE53_005468 3-methylcrotonyl-CoA carboxylase alpha subunit low > 113
Pseudomonas fluorescens SBW25-INTG 0.37 PFLU_RS18975 gamma-carboxygeranoyl-CoA hydratase 0.42 PFLU_RS18980 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha 0.76 3
Paraburkholderia bryophila 376MFSha3.1 0.37 H281DRAFT_01344 methylglutaconyl-CoA hydratase 0.41 H281DRAFT_01343 3-methylcrotonoyl-CoA carboxylase, alpha subunit
Pseudomonas fluorescens SBW25 0.37 PFLU_RS18975 gamma-carboxygeranoyl-CoA hydratase 0.42 PFLU_RS18980 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha low > 109
Herbaspirillum seropedicae SmR1 0.37 HSERO_RS15435 enoyl-CoA hydratase 0.43 HSERO_RS23460 3-methylcrotonyl-CoA carboxylase subunit alpha 0.64 19
Burkholderia phytofirmans PsJN 0.37 BPHYT_RS23270 enoyl-CoA hydratase 0.42 BPHYT_RS23275 3-methylcrotonyl-CoA carboxylase subunit alpha low > 109
Variovorax sp. OAS795 0.37 ABID97_RS25125 enoyl-CoA hydratase/isomerase family protein 0.38 ABID97_RS25115 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha 0.95 1
Variovorax sp. SCN45 0.36 GFF2010 Methylglutaconyl-CoA hydratase (EC 4.2.1.18) 0.38 GFF2013 Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4) 0.56 14
Hydrogenophaga sp. GW460-11-11-14-LB1 0.36 GFF1713 Methylglutaconyl-CoA hydratase (EC 4.2.1.18) 0.39 GFF1711 Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4) 0.71 8
Acinetobacter baumannii LAC-4 0.35 RR41_RS11120 enoyl-CoA hydratase/isomerase family protein 0.43 RR41_RS11115 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha low > 55
Dyella japonica UNC79MFTsu3.2 0.34 ABZR86_RS20610 enoyl-CoA hydratase-related protein 0.40 ABZR86_RS20625 biotin carboxylase N-terminal domain-containing protein
Acinetobacter radioresistens SK82 0.32 MPMX26_00630 2,3-dehydroadipyl-CoA hydratase 0.41 MPMX26_00629 Acetyl-/propionyl-coenzyme A carboxylase alpha chain
Rhodanobacter denitrificans FW104-10B01 0.31 LRK54_RS02275 enoyl-CoA hydratase-related protein 0.41 LRK54_RS02280 ATP-grasp domain-containing protein low > 59
Rhodanobacter sp. FW510-T8 0.31 OKGIIK_09325 Enoyl-CoA hydratase 0.41 OKGIIK_09335 3-methylcrotonyl-CoA carboxylase low > 53
Rhodanobacter denitrificans MT42 0.31 LRK55_RS02030 enoyl-CoA hydratase-related protein 0.41 LRK55_RS02035 biotin carboxylase N-terminal domain-containing protein
Rhodanobacter sp000427505 FW510-R12 0.31 LRK53_RS07695 enoyl-CoA hydratase-related protein 0.42 LRK53_RS07685 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha low > 59
Brevundimonas sp. GW460-12-10-14-LB2 0.30 A4249_RS03800 enoyl-CoA hydratase-related protein 0.35 A4249_RS03810 biotin carboxylase N-terminal domain-containing protein
Caulobacter crescentus NA1000 Δfur 0.29 CCNA_02251 methylglutaconyl-CoA hydratase 0.36 CCNA_02250 methylcrotonyl-CoA carboxylase biotin-containing subunit low > 67
Caulobacter crescentus NA1000 0.29 CCNA_02251 methylglutaconyl-CoA hydratase 0.36 CCNA_02250 methylcrotonyl-CoA carboxylase biotin-containing subunit
Sinorhizobium meliloti 1021 0.29 SM_b21126 3-methylglutaconyl-CoA hydratase (EC 4.2.1.18) (from data) 0.38 SM_b21124 3-methylcrotonyl-CoA carboxylase, alpha (biotin-containing) subunit (EC 6.4.1.4) (from data) 0.74 3
Rhizobium sp. OAE497 0.28 ABIE40_RS20765 crotonase/enoyl-CoA hydratase family protein 0.36 ABIE40_RS20775 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha 0.80 4
Xanthomonas campestris pv. campestris strain 8004 0.28 Xcc-8004.2922.1 Methylglutaconyl-CoA hydratase (EC 4.2.1.18) 0.41 Xcc-8004.318.1 Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4) 0.68 4
Phaeobacter inhibens DSM 17395 0.27 PGA1_c10360 putative enoyl-CoA hydratase 0.39 PGA1_c10330 methylcrotonoyl-CoA carboxylase subunit alpha
Dinoroseobacter shibae DFL-12 0.25 Dshi_1304 Enoyl-CoA hydratase/isomerase (RefSeq) 0.33 Dshi_0723 Propionyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.3) (from data) low > 64
Mycobacterium tuberculosis H37Rv 0.19 Rv0971c Probable enoyl-CoA hydratase EchA7 (enoyl hydrase) (unsaturated acyl-CoA hydratase) (crotonase) 0.33 Rv2501c Probable acetyl-/propionyl-coenzyme A carboxylase alpha chain (alpha subunit) AccA1: biotin carboxylase + biotin carboxyl carrier protein (BCCP) low > 58
Rhodopseudomonas palustris CGA009 0.17 TX73_011065 enoyl-CoA hydratase/isomerase family protein 0.37 TX73_013120 acetyl-CoA carboxylase biotin carboxylase subunit low > 86
Sphingobium sp. HT1-2 0.17 GFF4877 Isohexenylglutaconyl-CoA hydratase (EC 4.2.1.57) 0.36 GFF4876 Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4) low > 95
Agrobacterium fabrum C58 0.17 Atu3481 enoyl-CoA hydratase 0.43 Atu3479 3-methylcrotonyl-CoA carboxylase subunit alpha 0.55 1
Bosea sp. OAE506 0.15 ABIE41_RS10405 enoyl-CoA hydratase/isomerase family protein 0.36 ABIE41_RS14850 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha low > 77

Not shown: 13 genomes with orthologs for SO1895 only; 2 genomes with orthologs for SO1894 only