Conservation of cofitness between b2518 and b2557 in Escherichia coli BW25113

76 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b2518 ndk nucleoside diphosphate kinase (NCBI) 1.0 b2557 purL phosphoribosylformylglycinamidine synthase (NCBI) 0.33 17
Escherichia coli ECRC101 1.00 OKFHMN_21705 ndk nucleoside-diphosphate kinase 1.00 OKFHMN_21470 purL phosphoribosylformylglycinamidine synthase
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01191 Nucleoside diphosphate kinase 1.00 OHPLBJKB_01150 Phosphoribosylformylglycinamidine synthase low > 73
Escherichia coli ECRC102 1.00 NIAGMN_19475 ndk nucleoside-diphosphate kinase 1.00 NIAGMN_19240 purL phosphoribosylformylglycinamidine synthase
Escherichia coli ECRC101 1.00 MCAODC_12235 ndk nucleoside-diphosphate kinase 1.00 MCAODC_12000 purL phosphoribosylformylglycinamidine synthase
Escherichia coli ECOR27 1.00 NOLOHH_13355 ndk nucleoside-diphosphate kinase 1.00 NOLOHH_13145 purL phosphoribosylformylglycinamidine synthase
Escherichia coli BL21 1.00 ECD_02410 multifunctional nucleoside diphosphate kinase and apyrimidinic endonuclease and 3'-phosphodiesterase 1.00 ECD_02449 phosphoribosylformyl-glycineamide synthetase
Escherichia coli ECRC62 1.00 BNILDI_12155 ndk nucleoside-diphosphate kinase 1.00 BNILDI_11945 purL phosphoribosylformylglycinamidine synthase
Escherichia coli ECRC99 1.00 KEDOAH_06515 ndk nucleoside-diphosphate kinase 1.00 KEDOAH_06750 purL phosphoribosylformylglycinamidine synthase
Escherichia coli ECRC98 1.00 JDDGAC_25380 ndk nucleoside-diphosphate kinase 1.00 JDDGAC_25135 purL phosphoribosylformylglycinamidine synthase
Escherichia coli Nissle 1917 0.99 ECOLIN_RS14305 nucleoside-diphosphate kinase 1.00 ECOLIN_RS14470 phosphoribosylformylglycinamidine synthase low > 52
Escherichia fergusonii Becca 0.99 EFB2_01372 Nucleoside diphosphate kinase 1.00 EFB2_01339 Phosphoribosylformylglycinamidine synthase low > 86
Escherichia coli ECOR38 0.99 HEPCGN_20825 ndk nucleoside-diphosphate kinase 1.00 HEPCGN_20615 purL phosphoribosylformylglycinamidine synthase low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.97 GFF2415 Nucleoside diphosphate kinase (EC 2.7.4.6) 0.94 GFF2459 Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3) / Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3) low > 78
Klebsiella michiganensis M5al 0.96 BWI76_RS21100 nucleoside-diphosphate kinase 0.92 BWI76_RS21265 phosphoribosylformylglycinamidine synthase low > 92
Enterobacter asburiae PDN3 0.95 EX28DRAFT_0125 nucleoside diphosphate kinase (EC 2.7.4.6) 0.94 EX28DRAFT_0092 phosphoribosylformylglycinamidine synthase, single chain form low > 76
Enterobacter sp. TBS_079 0.95 MPMX20_03396 Nucleoside diphosphate kinase 0.93 MPMX20_03426 Phosphoribosylformylglycinamidine synthase low > 85
Erwinia tracheiphila SCR3 0.91 LU632_RS17820 ndk nucleoside-diphosphate kinase 0.84 LU632_RS17975 purL phosphoribosylformylglycinamidine synthase low > 74
Pantoea sp. MT58 0.90 IAI47_05035 nucleoside-diphosphate kinase 0.86 IAI47_04930 phosphoribosylformylglycinamidine synthase low > 76
Dickeya dadantii 3937 0.81 DDA3937_RS15485 nucleoside-diphosphate kinase 0.83 DDA3937_RS15655 phosphoribosylformylglycinamidine synthase low > 74
Dickeya dianthicola 67-19 0.81 HGI48_RS15595 nucleoside-diphosphate kinase 0.83 HGI48_RS15750 phosphoribosylformylglycinamidine synthase
Serratia liquefaciens MT49 0.81 IAI46_19295 nucleoside-diphosphate kinase 0.86 IAI46_19475 phosphoribosylformylglycinamidine synthase low > 86
Dickeya dianthicola ME23 0.80 DZA65_RS16670 nucleoside-diphosphate kinase 0.83 DZA65_RS16830 phosphoribosylformylglycinamidine synthase 0.45 20
Pectobacterium carotovorum WPP14 0.80 HER17_RS06080 nucleoside-diphosphate kinase 0.83 HER17_RS05910 phosphoribosylformylglycinamidine synthase low > 75
Rahnella sp. WP5 0.79 EX31_RS20530 nucleoside-diphosphate kinase 0.86 EX31_RS21895 phosphoribosylformylglycinamidine synthase low > 89
Alteromonas macleodii MIT1002 0.74 MIT1002_02793 Nucleoside diphosphate kinase 0.70 MIT1002_01027 Phosphoribosylformylglycinamidine synthase
Kangiella aquimarina DSM 16071 0.73 B158DRAFT_1148 nucleoside diphosphate kinase (EC 2.7.4.6) 0.63 B158DRAFT_2244 phosphoribosylformylglycinamidine synthase, single chain form
Shewanella sp. ANA-3 0.73 Shewana3_2272 nucleoside diphosphate kinase (RefSeq) 0.71 Shewana3_1240 phosphoribosylformylglycinamidine synthase (RefSeq)
Shewanella loihica PV-4 0.72 Shew_2310 nucleoside-diphosphate kinase (RefSeq) 0.72 Shew_1301 phosphoribosylformylglycinamidine synthase (RefSeq)
Shewanella amazonensis SB2B 0.71 Sama_1301 ndk nucleoside diphosphate kinase (RefSeq) 0.71 Sama_2350 phosphoribosylformylglycinamidine synthase (RefSeq)
Shewanella oneidensis MR-1 0.71 SO2274 ndk nucleoside diphosphate kinase (NCBI ptt file) 0.71 SO3287 purL phosphoribosylformylglycinamidine synthase (NCBI ptt file)
Acinetobacter radioresistens SK82 0.71 MPMX26_00425 Nucleoside diphosphate kinase 0.56 MPMX26_02183 Phosphoribosylformylglycinamidine synthase
Marinobacter adhaerens HP15 0.70 HP15_1489 nucleoside diphosphate kinase 0.63 HP15_1239 phosphoribosylformylglycinamidine synthase
Vibrio cholerae E7946 ATCC 55056 0.69 CSW01_03925 nucleoside-diphosphate kinase 0.76 CSW01_04470 phosphoribosylformylglycinamidine synthase
Pseudomonas sp. S08-1 0.66 OH686_17510 Nucleoside diphosphate kinase 0.66 OH686_17630 phosphoribosylformylglycinamidine synthase
Pseudomonas stutzeri RCH2 0.65 Psest_1258 Nucleoside diphosphate kinase 0.65 Psest_3159 phosphoribosylformylglycinamidine synthase, single chain form
Xanthomonas campestris pv. campestris strain 8004 0.65 Xcc-8004.2738.1 Nucleoside diphosphate kinase (EC 2.7.4.6) 0.49 Xcc-8004.4439.1 Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3) / Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3)
Rhodanobacter denitrificans FW104-10B01 0.64 LRK54_RS00065 nucleoside-diphosphate kinase 0.53 LRK54_RS04720 phosphoribosylformylglycinamidine synthase
Rhodanobacter denitrificans MT42 0.64 LRK55_RS18060 nucleoside-diphosphate kinase 0.53 LRK55_RS04500 phosphoribosylformylglycinamidine synthase
Dyella japonica UNC79MFTsu3.2 0.64 ABZR86_RS05460 nucleoside-diphosphate kinase 0.53 ABZR86_RS19235 phosphoribosylformylglycinamidine synthase
Pseudomonas putida KT2440 0.64 PP_0849 Nucleoside diphosphate kinase 0.65 PP_1037 Phosphoribosylformylglycinamidine synthase
Paraburkholderia graminis OAS925 0.64 ABIE53_002745 nucleoside-diphosphate kinase 0.55 ABIE53_002141 phosphoribosylformylglycinamidine synthase
Rhodanobacter sp. FW510-T8 0.64 OKGIIK_07145 ndk nucleoside-diphosphate kinase 0.53 OKGIIK_11505 purL phosphoribosylformylglycinamidine synthase
Pseudomonas fluorescens FW300-N2E2 0.63 Pf6N2E2_3182 Nucleoside diphosphate kinase (EC 2.7.4.6) 0.65 Pf6N2E2_5432 Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3) / Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3)
Pseudomonas fluorescens FW300-N2C3 0.63 AO356_06610 nucleoside diphosphate kinase 0.65 AO356_17520 phosphoribosylformylglycinamidine synthase
Cupriavidus basilensis FW507-4G11 0.63 RR42_RS13160 nucleoside diphosphate kinase 0.55 RR42_RS09140 phosphoribosylformylglycinamidine synthase
Paraburkholderia bryophila 376MFSha3.1 0.63 H281DRAFT_00513 nucleoside diphosphate kinase 0.55 H281DRAFT_00909 phosphoribosylformylglycinamidine synthase
Burkholderia phytofirmans PsJN 0.63 BPHYT_RS12595 nucleoside diphosphate kinase 0.55 BPHYT_RS09515 phosphoribosylformylglycinamidine synthase
Lysobacter sp. OAE881 0.63 ABIE51_RS09410 nucleoside-diphosphate kinase 0.49 ABIE51_RS04505 phosphoribosylformylglycinamidine synthase
Pseudomonas sp. RS175 0.63 PFR28_00293 Nucleoside diphosphate kinase 0.65 PFR28_03518 Phosphoribosylformylglycinamidine synthase
Pseudomonas fluorescens FW300-N2E3 0.62 AO353_15870 nucleoside diphosphate kinase 0.65 AO353_04485 phosphoribosylformylglycinamidine synthase
Pseudomonas fluorescens GW456-L13 0.62 PfGW456L13_4866 Nucleoside diphosphate kinase (EC 2.7.4.6) 0.65 PfGW456L13_4835 Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3) / Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3)
Pseudomonas fluorescens FW300-N1B4 0.62 Pf1N1B4_858 Nucleoside diphosphate kinase (EC 2.7.4.6) 0.65 Pf1N1B4_887 Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3) / Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3)
Pseudomonas syringae pv. syringae B728a ΔmexB 0.62 Psyr_1244 nucleoside diphosphate kinase 0.65 Psyr_1269 phosphoribosylformylglycinamidine synthase
Pseudomonas syringae pv. syringae B728a 0.62 Psyr_1244 nucleoside diphosphate kinase 0.65 Psyr_1269 phosphoribosylformylglycinamidine synthase
Pseudomonas simiae WCS417 0.61 PS417_23165 nucleoside diphosphate kinase 0.65 PS417_23020 phosphoribosylformylglycinamidine synthase
Variovorax sp. OAS795 0.61 ABID97_RS14205 nucleoside-diphosphate kinase 0.52 ABID97_RS15675 phosphoribosylformylglycinamidine synthase
Pseudomonas fluorescens SBW25-INTG 0.61 PFLU_RS24820 nucleoside-diphosphate kinase 0.65 PFLU_RS24685 phosphoribosylformylglycinamidine synthase
Pseudomonas fluorescens SBW25 0.61 PFLU_RS24820 nucleoside-diphosphate kinase 0.65 PFLU_RS24685 phosphoribosylformylglycinamidine synthase
Variovorax sp. SCN45 0.61 GFF991 Nucleoside diphosphate kinase (EC 2.7.4.6) 0.52 GFF1324 Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3) / Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3)
Paraburkholderia sabiae LMG 24235 0.60 QEN71_RS05960 nucleoside-diphosphate kinase 0.54 QEN71_RS21920 phosphoribosylformylglycinamidine synthase
Dechlorosoma suillum PS 0.59 Dsui_3146 nucleoside diphosphate kinase 0.57 Dsui_2892 phosphoribosylformylglycinamidine synthase, single chain form
Castellaniella sp019104865 MT123 0.58 ABCV34_RS02605 nucleoside-diphosphate kinase 0.50 ABCV34_RS04940 phosphoribosylformylglycinamidine synthase
Herbaspirillum seropedicae SmR1 0.58 HSERO_RS14815 nucleoside diphosphate kinase 0.56 HSERO_RS11190 phosphoribosylformylglycinamidine synthase
Ralstonia solanacearum PSI07 0.57 RPSI07_RS18120 nucleoside-diphosphate kinase 0.54 RPSI07_RS16190 phosphoribosylformylglycinamidine synthase
Ralstonia sp. UNC404CL21Col 0.57 ABZR87_RS10895 nucleoside-diphosphate kinase 0.53 ABZR87_RS12730 phosphoribosylformylglycinamidine synthase
Ralstonia solanacearum UW163 0.56 UW163_RS12720 nucleoside-diphosphate kinase 0.53 UW163_RS14595 phosphoribosylformylglycinamidine synthase
Ralstonia solanacearum IBSBF1503 0.56 RALBFv3_RS15255 nucleoside-diphosphate kinase 0.53 RALBFv3_RS01285 phosphoribosylformylglycinamidine synthase
Hydrogenophaga sp. GW460-11-11-14-LB1 0.56 GFF4867 Nucleoside diphosphate kinase (EC 2.7.4.6) 0.51 GFF4566 Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3) / Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3)
Ralstonia solanacearum GMI1000 0.56 RS_RS06065 nucleoside-diphosphate kinase 0.54 RS_RS08710 phosphoribosylformylglycinamidine synthase
Acidovorax sp. GW101-3H11 0.56 Ac3H11_1790 Nucleoside diphosphate kinase (EC 2.7.4.6) 0.51 Ac3H11_539 Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3) / Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3)
Pedobacter sp. GW460-11-11-14-LB5 0.45 CA265_RS24780 nucleoside-diphosphate kinase 0.27 CA265_RS05195 phosphoribosylformylglycinamidine synthase
Echinicola vietnamensis KMM 6221, DSM 17526 0.45 Echvi_0995 Nucleoside diphosphate kinase 0.25 Echvi_4428 Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain
Phocaeicola vulgatus CL09T03C04 0.36 HMPREF1058_RS08290 nucleoside-diphosphate kinase 0.25 HMPREF1058_RS07955 phosphoribosylformylglycinamidine synthase low > 67
Phocaeicola dorei CL03T12C01 0.36 ABI39_RS02465 nucleoside-diphosphate kinase 0.24 ABI39_RS00405 phosphoribosylformylglycinamidine synthase low > 72
Bacteroides ovatus ATCC 8483 0.36 BACOVA_01151 nucleoside diphosphate kinase 0.24 BACOVA_04462 putative phosphoribosylformylglycinamidine synthase low > 94
Bacteroides thetaiotaomicron VPI-5482 0.36 BT3925 nucleoside diphosphate kinase (NCBI ptt file) 0.25 BT1733 putative phosphoribosylformylglycinamidine synthase (NCBI ptt file) low > 81

Not shown: 23 genomes with orthologs for b2518 only; 4 genomes with orthologs for b2557 only