Conservation of cofitness between b2733 and b4170 in Escherichia coli BW25113

79 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b2733 mutS DNA mismatch repair protein (NCBI) 1.0 b4170 mutL DNA mismatch repair protein (NCBI) 0.36 1
Escherichia coli BL21 1.00 ECD_02583 methyl-directed mismatch repair protein 1.00 ECD_04037 methyl-directed mismatch repair protein low > 60
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01000 DNA mismatch repair protein MutS 1.00 OHPLBJKB_03872 DNA mismatch repair protein MutL 0.86 4
Escherichia coli ECOR27 1.00 NOLOHH_12370 mutS DNA mismatch repair protein MutS 1.00 NOLOHH_04530 mutL DNA mismatch repair endonuclease MutL 0.57 54
Escherichia coli ECRC101 1.00 OKFHMN_20525 mutS DNA mismatch repair protein MutS 0.99 OKFHMN_12265 mutL DNA mismatch repair endonuclease MutL — —
Escherichia coli ECRC102 1.00 NIAGMN_18295 mutS DNA mismatch repair protein MutS 0.99 NIAGMN_10115 mutL DNA mismatch repair endonuclease MutL — —
Escherichia coli ECRC101 1.00 MCAODC_11050 mutS DNA mismatch repair protein MutS 0.99 MCAODC_02780 mutL DNA mismatch repair endonuclease MutL — —
Escherichia coli ECRC98 1.00 JDDGAC_24190 mutS DNA mismatch repair protein MutS 0.99 JDDGAC_15905 mutL DNA mismatch repair endonuclease MutL — —
Escherichia coli ECRC99 1.00 KEDOAH_07610 mutS DNA mismatch repair protein MutS 0.99 KEDOAH_15890 mutL DNA mismatch repair endonuclease MutL — —
Escherichia coli ECRC62 1.00 BNILDI_10920 mutS DNA mismatch repair protein MutS 1.00 BNILDI_06960 mutL DNA mismatch repair endonuclease MutL — —
Escherichia coli Nissle 1917 0.99 ECOLIN_RS15275 DNA mismatch repair protein MutS 0.99 ECOLIN_RS24220 DNA mismatch repair endonuclease MutL 0.48 18
Escherichia coli ECOR38 0.99 HEPCGN_19705 mutS DNA mismatch repair protein MutS 0.99 HEPCGN_10495 mutL DNA mismatch repair endonuclease MutL 0.95 8
Escherichia fergusonii Becca 0.98 EFB2_01179 DNA mismatch repair protein MutS 0.99 EFB2_04365 DNA mismatch repair protein MutL low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.93 GFF4773 DNA mismatch repair protein MutS 0.85 GFF823 DNA mismatch repair protein MutL low > 78
Enterobacter sp. TBS_079 0.92 MPMX20_03619 DNA mismatch repair protein MutS 0.81 MPMX20_00451 DNA mismatch repair protein MutL 0.18 37
Enterobacter asburiae PDN3 0.92 EX28DRAFT_2829 DNA mismatch repair protein MutS 0.80 EX28DRAFT_3367 DNA mismatch repair protein MutL low > 76
Klebsiella michiganensis M5al 0.92 BWI76_RS22600 DNA mismatch repair protein MutS 0.83 BWI76_RS02525 DNA mismatch repair protein MutL low > 92
Dickeya dianthicola ME23 0.85 DZA65_RS05570 DNA mismatch repair protein MutS 0.61 DZA65_RS19690 DNA mismatch repair endonuclease MutL low > 75
Serratia liquefaciens MT49 0.85 IAI46_03800 DNA mismatch repair protein MutS 0.67 IAI46_01615 DNA mismatch repair endonuclease MutL low > 86
Dickeya dadantii 3937 0.85 DDA3937_RS05230 DNA mismatch repair protein MutS 0.62 DDA3937_RS18620 DNA mismatch repair endonuclease MutL low > 74
Dickeya dianthicola 67-19 0.85 HGI48_RS05230 DNA mismatch repair protein MutS 0.61 HGI48_RS18555 DNA mismatch repair endonuclease MutL low > 71
Erwinia tracheiphila SCR3 0.84 LU632_RS06485 mutS DNA mismatch repair protein MutS 0.65 LU632_RS02045 mutL DNA mismatch repair endonuclease MutL low > 74
Rahnella sp. WP5 0.84 EX31_RS07820 DNA mismatch repair protein MutS 0.65 EX31_RS08830 DNA mismatch repair endonuclease MutL low > 89
Pectobacterium carotovorum WPP14 0.84 HER17_RS16220 DNA mismatch repair protein MutS 0.64 HER17_RS02575 DNA mismatch repair endonuclease MutL low > 75
Pantoea sp. MT58 0.82 IAI47_04240 DNA mismatch repair protein MutS 0.67 IAI47_02580 DNA mismatch repair endonuclease MutL low > 76
Vibrio cholerae E7946 ATCC 55056 0.71 CSW01_02840 DNA mismatch repair protein MutS 0.45 CSW01_01825 DNA mismatch repair protein MutL low > 62
Shewanella sp. ANA-3 0.67 Shewana3_1125 DNA mismatch repair protein MutS (RefSeq) 0.38 Shewana3_0595 mutL DNA mismatch repair protein (RefSeq) 0.62 2
Shewanella loihica PV-4 0.66 Shew_1214 DNA mismatch repair protein (RefSeq) 0.38 Shew_0564 DNA mismatch repair protein MutL (RefSeq) 0.74 1
Shewanella oneidensis MR-1 0.65 SO3431 mutS DNA mismatch repair protein MutS (NCBI ptt file) 0.39 SO0601 mutL DNA mismatch repair protein MutL (NCBI ptt file) 0.53 1
Shewanella amazonensis SB2B 0.65 Sama_1045 DNA mismatch repair protein MutS (RefSeq) 0.39 Sama_3027 mutL DNA mismatch repair protein (RefSeq) 0.88 2
Marinobacter adhaerens HP15 0.60 HP15_1047 DNA mismatch repair protein MutS 0.35 HP15_2501 DNA mismatch repair protein mutL low > 73
Pseudomonas sp. RS175 0.58 PFR28_00429 DNA mismatch repair protein MutS 0.34 PFR28_05119 DNA mismatch repair protein MutL 0.41 16
Pseudomonas fluorescens FW300-N2E2 0.58 Pf6N2E2_3035 DNA mismatch repair protein MutS 0.35 Pf6N2E2_3616 DNA mismatch repair protein MutL 0.37 9
Pseudomonas fluorescens FW300-N2C3 0.58 AO356_05875 DNA mismatch repair protein MutS 0.34 AO356_08665 DNA mismatch repair protein 0.33 15
Pseudomonas stutzeri RCH2 0.58 Psest_2875 DNA mismatch repair protein MutS 0.36 Psest_0681 DNA mismatch repair protein MutL 0.41 1
Pseudomonas simiae WCS417 0.58 PS417_05680 DNA mismatch repair protein MutS 0.35 PS417_02480 DNA mismatch repair protein 0.40 2
Pseudomonas fluorescens FW300-N2E3 0.57 AO353_16625 DNA mismatch repair protein MutS 0.34 AO353_13135 DNA mismatch repair protein 0.37 21
Pseudomonas fluorescens FW300-N1B4 0.57 Pf1N1B4_3117 DNA mismatch repair protein MutS 0.34 Pf1N1B4_1414 DNA mismatch repair protein MutL 0.31 15
Pseudomonas putida KT2440 0.57 PP_1626 DNA mismatch repair protein MutS 0.35 PP_4896 DNA mismatch repair protein MutL 0.51 29
Pseudomonas syringae pv. syringae B728a ΔmexB 0.57 Psyr_1376 DNA mismatch repair protein MutS 0.35 Psyr_0570 DNA mismatch repair protein MutL low > 86
Pseudomonas syringae pv. syringae B728a 0.57 Psyr_1376 DNA mismatch repair protein MutS 0.35 Psyr_0570 DNA mismatch repair protein MutL low > 86
Pseudomonas fluorescens GW456-L13 0.57 PfGW456L13_4672 DNA mismatch repair protein MutS 0.34 PfGW456L13_156 DNA mismatch repair protein MutL 0.32 18
Pseudomonas fluorescens SBW25-INTG 0.57 PFLU_RS05765 DNA mismatch repair protein MutS 0.35 PFLU_RS02560 DNA mismatch repair endonuclease MutL 0.34 6
Pseudomonas fluorescens SBW25 0.57 PFLU_RS05765 DNA mismatch repair protein MutS 0.35 PFLU_RS02560 DNA mismatch repair endonuclease MutL low > 109
Pseudomonas sp. S08-1 0.57 OH686_18195 DNA mismatch repair protein MutS 0.36 OH686_09480 DNA mismatch repair protein MutL 0.91 20
Dyella japonica UNC79MFTsu3.2 0.55 ABZR86_RS00630 DNA mismatch repair protein MutS 0.30 ABZR86_RS00855 DNA mismatch repair endonuclease MutL 0.63 2
Rhodanobacter denitrificans MT42 0.54 LRK55_RS14650 DNA mismatch repair protein MutS 0.30 LRK55_RS14865 DNA mismatch repair endonuclease MutL low > 63
Rhodanobacter sp. FW510-T8 0.53 OKGIIK_03705 mutS DNA mismatch repair protein MutS 0.30 OKGIIK_03920 mutL DNA mismatch repair endonuclease MutL low > 52
Rhodanobacter denitrificans FW104-10B01 0.53 LRK54_RS14935 DNA mismatch repair protein MutS 0.30 LRK54_RS15150 DNA mismatch repair endonuclease MutL low > 59
Xanthomonas campestris pv. campestris strain 8004 0.51 Xcc-8004.3760.1 DNA mismatch repair protein MutS 0.31 Xcc-8004.2256.1 DNA mismatch repair protein MutL low > 74
Paraburkholderia bryophila 376MFSha3.1 0.49 H281DRAFT_00537 DNA mismatch repair protein MutS 0.25 H281DRAFT_04712 DNA mismatch repair protein MutL low > 103
Ralstonia sp. UNC404CL21Col 0.49 ABZR87_RS10580 DNA mismatch repair protein MutS 0.27 ABZR87_RS00870 DNA mismatch repair endonuclease MutL 0.44 52
Cupriavidus basilensis FW507-4G11 0.49 RR42_RS06285 DNA mismatch repair protein MutS 0.27 RR42_RS17205 DNA mismatch repair protein 0.45 9
Dechlorosoma suillum PS 0.49 Dsui_2244 DNA mismatch repair protein MutS 0.27 Dsui_1551 DNA mismatch repair protein MutL low > 51
Ralstonia solanacearum IBSBF1503 0.49 RALBFv3_RS14920 DNA mismatch repair protein MutS 0.28 RALBFv3_RS05230 DNA mismatch repair endonuclease MutL low > 76
Ralstonia solanacearum PSI07 0.49 RPSI07_RS18440 DNA mismatch repair protein MutS 0.27 RPSI07_RS12070 DNA mismatch repair endonuclease MutL low > 81
Ralstonia solanacearum UW163 0.49 UW163_RS12390 DNA mismatch repair protein MutS 0.28 UW163_RS08395 DNA mismatch repair endonuclease MutL — —
Ralstonia solanacearum GMI1000 0.49 RS_RS05735 DNA mismatch repair protein MutS 0.28 RS_RS12850 DNA mismatch repair protein MutL low > 80
Herbaspirillum seropedicae SmR1 0.49 HSERO_RS16360 DNA mismatch repair protein MutS 0.28 HSERO_RS04190 DNA mismatch repair protein low > 78
Burkholderia phytofirmans PsJN 0.48 BPHYT_RS12475 DNA mismatch repair protein MutS 0.25 BPHYT_RS03650 DNA mismatch repair protein 0.69 1
Acinetobacter radioresistens SK82 0.47 MPMX26_01954 DNA mismatch repair protein MutS 0.25 MPMX26_01207 DNA mismatch repair protein MutL low > 36
Paraburkholderia sabiae LMG 24235 0.47 QEN71_RS06085 DNA mismatch repair protein MutS 0.26 QEN71_RS26435 DNA mismatch repair endonuclease MutL low > 153
Castellaniella sp019104865 MT123 0.44 ABCV34_RS00270 DNA mismatch repair protein MutS 0.25 ABCV34_RS08785 DNA mismatch repair endonuclease MutL low > 48
Variovorax sp. SCN45 0.44 GFF6634 DNA mismatch repair protein MutS 0.24 GFF4800 DNA mismatch repair protein MutL low > 127
Acidovorax sp. GW101-3H11 0.44 Ac3H11_3641 DNA mismatch repair protein MutS 0.25 Ac3H11_313 DNA mismatch repair protein MutL 0.79 1
Variovorax sp. OAS795 0.43 ABID97_RS20815 DNA mismatch repair protein MutS 0.24 ABID97_RS20310 DNA mismatch repair endonuclease MutL 0.31 42
Hydrogenophaga sp. GW460-11-11-14-LB1 0.42 GFF3599 DNA mismatch repair protein MutS 0.24 GFF5485 DNA mismatch repair protein MutL low > 90
Mucilaginibacter yixingensis YX-36 DSM 26809 0.36 ABZR88_RS10580 DNA mismatch repair protein MutS 0.20 ABZR88_RS00380 DNA mismatch repair endonuclease MutL — —
Bacteroides ovatus ATCC 8483 0.36 BACOVA_02824 DNA mismatch repair protein MutS 0.17 BACOVA_00344 DNA mismatch repair domain protein — —
Bacteroides stercoris CC31F 0.36 HMPREF1181_RS01980 DNA mismatch repair protein MutS 0.17 HMPREF1181_RS07405 DNA mismatch repair endonuclease MutL — —
Bacteroides thetaiotaomicron VPI-5482 0.36 BT3121 DNA mismatch repair protein mutS (NCBI ptt file) 0.16 BT3851 DNA mismatch repair protein mutL (NCBI ptt file) — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.36 CA264_18545 DNA mismatch repair protein MutS 0.20 CA264_13305 DNA mismatch repair protein MutL — —
Azospirillum sp. SherDot2 0.33 MPMX19_00908 DNA mismatch repair protein MutS 0.22 MPMX19_01619 DNA mismatch repair protein MutL low > 112
Phaeobacter inhibens DSM 17395 0.33 PGA1_c35000 DNA mismatch repair protein MutS 0.21 PGA1_c32740 DNA mismatch repair protein MutL low > 62
Rhodospirillum rubrum S1H 0.33 Rru_A3541 MutS 1 protein (NCBI) 0.22 Rru_A2946 DNA mismatch repair protein (NCBI) low > 58
Azospirillum brasilense Sp245 0.33 AZOBR_RS02125 DNA mismatch repair protein MutS 0.22 AZOBR_RS05025 DNA mismatch repair protein MutL low > 97
Magnetospirillum magneticum AMB-1 0.32 AMB_RS01455 DNA mismatch repair protein MutS 0.24 AMB_RS22340 DNA mismatch repair protein MutL low > 64
Sphingomonas koreensis DSMZ 15582 0.32 Ga0059261_3784 DNA mismatch repair protein MutS 0.20 Ga0059261_0371 DNA mismatch repair protein MutL low > 68
Bosea sp. OAE506 0.30 ABIE41_RS03650 DNA mismatch repair protein MutS 0.19 ABIE41_RS23235 DNA mismatch repair endonuclease MutL low > 77
Brevundimonas sp. GW460-12-10-14-LB2 0.28 A4249_RS12110 DNA mismatch repair protein MutS 0.21 A4249_RS04225 DNA mismatch repair endonuclease MutL low > 48

Not shown: 20 genomes with orthologs for b2733 only; 0 genomes with orthologs for b4170 only