Conservation of cofitness between b0426 and b0888 in Escherichia coli BW25113

77 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b0426 yajQ orf, hypothetical protein (VIMSS) 1.0 b0888 trxB thioredoxin reductase, FAD/NAD(P)-binding (NCBI) 0.26 20
Escherichia coli BL21 1.00 ECD_00374 phage Phi6 host factor, ATP/GTP binding protein 1.00 ECD_00892 thioredoxin reductase, FAD/NAD(P)-binding — —
Escherichia coli ECRC102 1.00 NIAGMN_06445 yajQ nucleotide binding protein YajQ 1.00 NIAGMN_03300 trxB thioredoxin-disulfide reductase — —
Escherichia coli ECRC101 1.00 OKFHMN_08390 yajQ nucleotide binding protein YajQ 1.00 OKFHMN_05580 trxB thioredoxin-disulfide reductase — —
Escherichia coli ECRC62 1.00 BNILDI_22755 yajQ nucleotide binding protein YajQ 1.00 BNILDI_20405 trxB thioredoxin-disulfide reductase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_03250 hypothetical protein 1.00 OHPLBJKB_02780 Thioredoxin reductase low > 73
Escherichia coli ECOR38 1.00 HEPCGN_07020 yajQ nucleotide binding protein YajQ 0.99 HEPCGN_22930 trxB thioredoxin-disulfide reductase low > 85
Escherichia fergusonii Becca 1.00 EFB2_03631 hypothetical protein 0.99 EFB2_03173 Thioredoxin reductase low > 86
Escherichia coli ECRC98 1.00 JDDGAC_12045 yajQ nucleotide binding protein YajQ 1.00 JDDGAC_09390 trxB thioredoxin-disulfide reductase — —
Escherichia coli ECRC99 1.00 KEDOAH_19575 yajQ nucleotide binding protein YajQ 1.00 KEDOAH_22155 trxB thioredoxin-disulfide reductase — —
Escherichia coli ECOR27 1.00 NOLOHH_01340 yajQ nucleotide binding protein YajQ 1.00 NOLOHH_22150 trxB thioredoxin-disulfide reductase — —
Escherichia coli ECRC101 1.00 MCAODC_27615 yajQ nucleotide binding protein YajQ 1.00 MCAODC_24970 trxB thioredoxin-disulfide reductase — —
Escherichia coli Nissle 1917 1.00 ECOLIN_RS02565 nucleotide binding protein YajQ 0.99 ECOLIN_RS04725 thioredoxin-disulfide reductase — —
Enterobacter asburiae PDN3 0.92 EX28DRAFT_2545 Uncharacterized protein conserved in bacteria 0.94 EX28DRAFT_2044 thioredoxin-disulfide reductase — —
Klebsiella michiganensis M5al 0.92 BWI76_RS06410 YajQ family cyclic di-GMP-binding protein 0.96 BWI76_RS09645 thioredoxin-disulfide reductase low > 92
Enterobacter sp. TBS_079 0.91 MPMX20_01017 hypothetical protein 0.96 MPMX20_01550 Thioredoxin reductase low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.91 GFF4337 FIG001943: hypothetical protein YajQ 0.97 GFF4892 Thioredoxin reductase (EC 1.8.1.9) low > 78
Erwinia tracheiphila SCR3 0.79 LU632_RS18450 YajQ family cyclic di-GMP-binding protein 0.86 LU632_RS09730 trxB thioredoxin-disulfide reductase low > 74
Pectobacterium carotovorum WPP14 0.79 HER17_RS15905 YajQ family cyclic di-GMP-binding protein 0.89 HER17_RS12365 thioredoxin-disulfide reductase low > 75
Rahnella sp. WP5 0.79 EX31_RS22185 YajQ family cyclic di-GMP-binding protein 0.86 EX31_RS18535 thioredoxin-disulfide reductase low > 89
Serratia liquefaciens MT49 0.78 IAI46_04955 YajQ family cyclic di-GMP-binding protein 0.87 IAI46_08550 thioredoxin-disulfide reductase low > 86
Pantoea sp. MT58 0.78 IAI47_14710 YajQ family cyclic di-GMP-binding protein 0.89 IAI47_12920 thioredoxin-disulfide reductase low > 76
Dickeya dianthicola 67-19 0.77 HGI48_RS05620 YajQ family cyclic di-GMP-binding protein 0.86 HGI48_RS09600 thioredoxin-disulfide reductase — —
Dickeya dadantii 3937 0.76 DDA3937_RS05560 YajQ family cyclic di-GMP-binding protein 0.86 DDA3937_RS09585 thioredoxin-disulfide reductase low > 74
Dickeya dianthicola ME23 0.76 DZA65_RS05945 YajQ family cyclic di-GMP-binding protein 0.86 DZA65_RS09910 thioredoxin-disulfide reductase low > 75
Shewanella sp. ANA-3 0.65 Shewana3_0782 putative nucleotide-binding protein (RefSeq) 0.81 Shewana3_2047 thioredoxin reductase (RefSeq) low > 73
Kangiella aquimarina DSM 16071 0.63 B158DRAFT_0029 Uncharacterized protein conserved in bacteria 0.74 B158DRAFT_1829 thioredoxin-disulfide reductase — —
Shewanella oneidensis MR-1 0.63 SO3815 conserved hypothetical protein (NCBI ptt file) 0.81 SO2303 trxB thioredoxin reductase (NCBI ptt file) — —
Vibrio cholerae E7946 ATCC 55056 0.61 CSW01_07570 nucleotide-binding protein 0.83 CSW01_05985 thioredoxin-disulfide reductase low > 62
Shewanella loihica PV-4 0.61 Shew_2893 nucleotide-binding protein (RefSeq) 0.81 Shew_2028 thioredoxin reductase (RefSeq) — —
Shewanella amazonensis SB2B 0.60 Sama_2557 putative nucleotide-binding protein (RefSeq) 0.82 Sama_1769 thioredoxin reductase (RefSeq) — —
Alteromonas macleodii MIT1002 0.56 MIT1002_04129 putative nucleotide-binding protein 0.79 MIT1002_01838 Thioredoxin reductase — —
Marinobacter adhaerens HP15 0.51 HP15_2364 nucleotide-binding protein 0.72 HP15_2076 secreted protein containing thioredoxin reductase domain — —
Xanthomonas campestris pv. campestris strain 8004 0.48 Xcc-8004.4605.1 FIG001943: hypothetical protein YajQ 0.68 Xcc-8004.2750.1 Thioredoxin reductase (EC 1.8.1.9) — —
Lysobacter sp. OAE881 0.48 ABIE51_RS18465 YajQ family cyclic di-GMP-binding protein 0.68 ABIE51_RS11465 thioredoxin-disulfide reductase — —
Pseudomonas stutzeri RCH2 0.47 Psest_1142 Uncharacterized protein conserved in bacteria 0.73 Psest_2031 thioredoxin-disulfide reductase — —
Pseudomonas fluorescens FW300-N2C3 0.47 AO356_17960 nucleotide-binding protein 0.72 AO356_16715 thioredoxin reductase — —
Pseudomonas fluorescens FW300-N2E2 0.47 Pf6N2E2_5522 FIG001943: hypothetical protein YajQ 0.72 Pf6N2E2_5268 Thioredoxin reductase (EC 1.8.1.9) — —
Acinetobacter radioresistens SK82 0.46 MPMX26_02644 hypothetical protein 0.71 MPMX26_02425 Thioredoxin reductase low > 36
Pseudomonas sp. S08-1 0.46 OH686_08210 UPF0234 protein Yitk 0.73 OH686_00255 thioredoxin-disulfide reductase low > 80
Rhodanobacter sp. FW510-T8 0.46 OKGIIK_03500 yajQ YajQ family cyclic di-GMP-binding protein 0.68 OKGIIK_07630 trxB thioredoxin-disulfide reductase — —
Pseudomonas fluorescens GW456-L13 0.46 PfGW456L13_1840 FIG001943: hypothetical protein YajQ 0.71 PfGW456L13_4983 Thioredoxin reductase (EC 1.8.1.9) — —
Pseudomonas putida KT2440 0.46 PP_1352 UPF0234 protein PP_1352 0.73 PP_0786 thioredoxin reductase — —
Pseudomonas simiae WCS417 0.46 PS417_22510 nucleotide-binding protein 0.73 PS417_23515 thioredoxin reductase — —
Pseudomonas fluorescens FW300-N2E3 0.46 AO353_03640 nucleotide-binding protein 0.72 AO353_05015 thioredoxin reductase — —
Rhodanobacter denitrificans MT42 0.46 LRK55_RS14390 YajQ family cyclic di-GMP-binding protein 0.68 LRK55_RS17485 thioredoxin-disulfide reductase — —
Pseudomonas fluorescens SBW25-INTG 0.46 PFLU_RS24150 YajQ family cyclic di-GMP-binding protein 0.73 PFLU_RS25330 thioredoxin-disulfide reductase — —
Pseudomonas sp. RS175 0.46 PFR28_03425 hypothetical protein 0.72 PFR28_00202 Glucosaminate ammonia-lyase — —
Pseudomonas fluorescens SBW25 0.46 PFLU_RS24150 YajQ family cyclic di-GMP-binding protein 0.73 PFLU_RS25330 thioredoxin-disulfide reductase — —
Dyella japonica UNC79MFTsu3.2 0.45 ABZR86_RS00410 YajQ family cyclic di-GMP-binding protein 0.65 ABZR86_RS01805 thioredoxin-disulfide reductase — —
Castellaniella sp019104865 MT123 0.45 ABCV34_RS15080 YajQ family cyclic di-GMP-binding protein 0.68 ABCV34_RS07235 thioredoxin-disulfide reductase — —
Pseudomonas syringae pv. syringae B728a 0.45 Psyr_4087 Protein of unknown function DUF520 0.73 Psyr_1016 Thioredoxin reductase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.45 Psyr_4087 Protein of unknown function DUF520 0.73 Psyr_1016 Thioredoxin reductase — —
Rhodanobacter denitrificans FW104-10B01 0.45 LRK54_RS14675 YajQ family cyclic di-GMP-binding protein 0.68 LRK54_RS17260 thioredoxin-disulfide reductase — —
Pseudomonas fluorescens FW300-N1B4 0.45 Pf1N1B4_650 FIG001943: hypothetical protein YajQ 0.71 Pf1N1B4_1046 Thioredoxin reductase (EC 1.8.1.9) — —
Variovorax sp. OAS795 0.44 ABID97_RS21685 YajQ family cyclic di-GMP-binding protein 0.68 ABID97_RS07815 thioredoxin-disulfide reductase — —
Variovorax sp. SCN45 0.44 GFF3099 UPF0234 protein Yitk 0.68 GFF6038 Thioredoxin reductase (EC 1.8.1.9) — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.44 GFF292 FIG001943: hypothetical protein YajQ 0.70 GFF773 Thioredoxin reductase (EC 1.8.1.9) — —
Acidovorax sp. GW101-3H11 0.43 Ac3H11_2620 FIG001943: hypothetical protein YajQ 0.70 Ac3H11_1700 Thioredoxin reductase (EC 1.8.1.9) — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.43 ABZR88_RS04840 YajQ family cyclic di-GMP-binding protein 0.48 ABZR88_RS10305 thioredoxin-disulfide reductase — —
Magnetospirillum magneticum AMB-1 0.43 AMB_RS18375 nucleotide-binding protein 0.52 AMB_RS03410 thioredoxin-disulfide reductase — —
Ralstonia solanacearum GMI1000 0.42 RS_RS12780 nucleotide-binding protein 0.68 RS_RS11755 thioredoxin-disulfide reductase — —
Ralstonia solanacearum PSI07 0.41 RPSI07_RS12140 YajQ family cyclic di-GMP-binding protein 0.68 RPSI07_RS13185 thioredoxin-disulfide reductase — —
Herbaspirillum seropedicae SmR1 0.41 HSERO_RS07165 nucleotide-binding protein 0.71 HSERO_RS09495 thioredoxin reductase — —
Ralstonia sp. UNC404CL21Col 0.40 ABZR87_RS00820 YajQ family cyclic di-GMP-binding protein 0.68 ABZR87_RS16065 thioredoxin-disulfide reductase — —
Ralstonia solanacearum IBSBF1503 0.40 RALBFv3_RS05160 YajQ family cyclic di-GMP-binding protein 0.68 RALBFv3_RS04165 thioredoxin-disulfide reductase — —
Ralstonia solanacearum UW163 0.40 UW163_RS08465 YajQ family cyclic di-GMP-binding protein 0.68 UW163_RS09505 thioredoxin-disulfide reductase — —
Azospirillum brasilense Sp245 0.40 AZOBR_RS21810 nucleotide-binding protein 0.53 AZOBR_RS12935 thioredoxin reductase — —
Azospirillum sp. SherDot2 0.39 MPMX19_04413 hypothetical protein 0.53 MPMX19_00232 Thioredoxin reductase — —
Cupriavidus basilensis FW507-4G11 0.39 RR42_RS17155 nucleotide-binding protein 0.70 RR42_RS04315 thioredoxin reductase — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.39 CA264_15545 YajQ family cyclic di-GMP-binding protein 0.43 CA264_04890 thioredoxin-disulfide reductase — —
Mycobacterium tuberculosis H37Rv 0.38 Rv0566c Conserved protein 0.44 Rv3913 Probable thioredoxin reductase TrxB2 (TRXR) (TR) — —
Paraburkholderia bryophila 376MFSha3.1 0.38 H281DRAFT_04122 hypothetical protein 0.69 H281DRAFT_00173 thioredoxin reductase (NADPH) — —
Paraburkholderia graminis OAS925 0.38 ABIE53_003357 uncharacterized protein YajQ (UPF0234 family) 0.69 ABIE53_001285 thioredoxin reductase (NADPH) — —
Dechlorosoma suillum PS 0.38 Dsui_3245 hypothetical protein 0.72 Dsui_1689 thioredoxin-disulfide reductase — —
Burkholderia phytofirmans PsJN 0.38 BPHYT_RS15930 nucleotide-binding protein 0.68 BPHYT_RS05070 thioredoxin reductase — —
Pedobacter sp. GW460-11-11-14-LB5 0.37 CA265_RS09840 YajQ family cyclic di-GMP-binding protein 0.49 CA265_RS10630 thioredoxin-disulfide reductase — —
Paraburkholderia sabiae LMG 24235 0.37 QEN71_RS02775 YajQ family cyclic di-GMP-binding protein 0.68 QEN71_RS03380 thioredoxin-disulfide reductase — —

Not shown: 3 genomes with orthologs for b0426 only; 22 genomes with orthologs for b0888 only