Homologs of Xcc-8004.4777.1 from Xanthomonas campestris pv. campestris strain 8004

ATP-dependent RNA helicase RhlB
SEED: ATP-dependent RNA helicase RhlB
KEGG: ATP-dependent RNA helicase RhlB

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4777.1 ATP-dependent RNA helicase RhlB strong 100 100
o Lysobacter sp. OAE881 ABIE51_RS02080 ATP-dependent RNA helicase RhlB cofit 76 97
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS12600 DEAD/DEAH box helicase sig. 61 84
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS03710 DEAD/DEAH box helicase cofit 60 86
  Rhodanobacter denitrificans MT42 LRK55_RS10625 DEAD/DEAH box helicase cofit 61 82
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS10920 DEAD/DEAH box helicase sig. 61 82
  Rhodanobacter sp. FW510-T8 OKGIIK_12950 ATP-dependent RNA helicase RhlB cofit 61 79
  Pantoea sp. MT58 IAI47_18535 ATP-dependent RNA helicase RhlB sig. 58 67
  Vibrio cholerae E7946 ATCC 55056 CSW01_01555 ATP-dependent RNA helicase RhlB cofit 52 79
  Klebsiella michiganensis M5al BWI76_RS01065 ATP-dependent RNA helicase RhlB strong 56 68
  Escherichia coli BL21 ECD_03658 ATP-dependent RNA helicase sig. 56 68
  Dickeya dadantii 3937 DDA3937_RS20080 ATP-dependent RNA helicase RhlB sig. 56 68
  Escherichia fergusonii Becca EFB2_04858 ATP-dependent RNA helicase RhlB cofit 56 68
  Escherichia coli ECOR27 NOLOHH_06735 rhlB ATP-dependent RNA helicase RhlB cofit 56 68
  Escherichia coli ECOR38 HEPCGN_13310 rhlB ATP-dependent RNA helicase RhlB cofit 56 68
  Escherichia coli ECRC102 NIAGMN_12355 rhlB ATP-dependent RNA helicase RhlB insig. 56 68
  Escherichia coli ECRC62 BNILDI_04790 rhlB ATP-dependent RNA helicase RhlB cofit 56 68
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_04274 ATP-dependent RNA helicase RhlB cofit 56 68
  Escherichia coli Nissle 1917 ECOLIN_RS21700 ATP-dependent RNA helicase RhlB cofit 56 68
  Escherichia coli BW25113 b3780 rhlB ATP-dependent RNA helicase (NCBI) strong 56 68
  Pectobacterium carotovorum WPP14 HER17_RS01130 ATP-dependent RNA helicase RhlB strong 56 68
  Escherichia coli ECRC100 OKFHMN_14600 rhlB ATP-dependent RNA helicase RhlB insig. 56 68
  Escherichia coli ECRC101 MCAODC_05105 rhlB ATP-dependent RNA helicase RhlB cofit 56 68
  Escherichia coli ECRC98 JDDGAC_18220 rhlB ATP-dependent RNA helicase RhlB cofit 56 68
  Escherichia coli ECRC99 KEDOAH_13550 rhlB ATP-dependent RNA helicase RhlB no data 56 68
  Enterobacter asburiae PDN3 EX28DRAFT_4451 Superfamily II DNA and RNA helicases cofit 56 68
  Enterobacter sp. TBS_079 MPMX20_04492 ATP-dependent RNA helicase RhlB sig. 56 68
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2892 ATP-dependent RNA helicase RhlB strong 56 68
  Shewanella loihica PV-4 Shew_0339 ATP-dependent RNA helicase RhlB (RefSeq) strong 56 67
  Serratia liquefaciens MT49 IAI46_00575 ATP-dependent RNA helicase RhlB cofit 56 67
  Rahnella sp. WP5 EX31_RS15040 ATP-dependent RNA helicase RhlB cofit 56 68
  Erwinia tracheiphila SCR3 LU632_RS24265 rhlB ATP-dependent RNA helicase RhlB sig. 52 76
  Shewanella sp. ANA-3 Shewana3_0410 ATP-dependent RNA helicase RhlB (RefSeq) strong 57 65
  Shewanella oneidensis MR-1 SO0407 ATP-dependent RNA helicase, DEAD box family (NCBI ptt file) strong 56 65
  Dickeya dianthicola ME23 DZA65_RS21270 ATP-dependent RNA helicase RhlB cofit 56 67
  Dickeya dianthicola 67-19 HGI48_RS20225 ATP-dependent RNA helicase RhlB strong 56 67
  Alteromonas macleodii MIT1002 MIT1002_00515 ATP-dependent RNA helicase RhlB strong 59 64
  Erwinia amylovora T8 OLJFJH_06265 ATP-dependent RNA helicase RhlB cofit 56 68
  Shewanella amazonensis SB2B Sama_3215 ATP-dependent RNA helicase RhlB (RefSeq) sig. 54 67
  Kangiella aquimarina DSM 16071 B158DRAFT_0413 Superfamily II DNA and RNA helicases cofit 52 69
  Pseudomonas aeruginosa PA14 IKLFDK_19890 ATP-dependent RNA helicase RhlB cofit 46 65
  Marinobacter adhaerens HP15 HP15_2099 DEAD/DEAH box helicase domain protein sig. 46 66
  Pseudomonas sp. SVBP6 COO64_RS11685 rhlB ATP-dependent RNA helicase RhlB insig. 46 65
  Pseudomonas stutzeri RCH2 Psest_3166 Superfamily II DNA and RNA helicases sig. 45 66
  Pseudomonas fluorescens FW300-N2E3 AO353_04625 ATP-dependent RNA helicase RhlB insig. 46 65
  Pseudomonas sp. RS175 PFR28_03544 ATP-dependent RNA helicase RhlB insig. 46 65
  Pseudomonas fluorescens FW300-N2C3 AO356_17370 ATP-dependent RNA helicase RhlB insig. 46 65
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5400 ATP-dependent RNA helicase RhlB insig. 46 65
  Pseudomonas simiae WCS417 PS417_04890 ATP-dependent RNA helicase RhlB insig. 46 65
  Pseudomonas putida KT2440 PP_1295 ATP-dependent RNA helicase RhlB sig. 46 65
  Pseudomonas sp. BP01 JOY50_RS15315 rhlB ATP-dependent RNA helicase RhlB insig. 46 65
  Pseudomonas sp. S08-1 OH686_17780 ATP-dependent RNA helicase RhlB cofit 45 65
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1696 ATP-dependent RNA helicase RhlB insig. 45 65
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_920 ATP-dependent RNA helicase RhlB sig. 46 65
  Acinetobacter radioresistens SK82 MPMX26_01113 ATP-dependent RNA helicase RhlB cofit 46 63
  Pseudomonas syringae pv. syringae B728a Psyr_1070 Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal insig. 44 70
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1070 Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal insig. 44 70
  Pseudomonas fluorescens SBW25 PFLU_RS04950 ATP-dependent RNA helicase RhlB cofit 45 65
  Pseudomonas fluorescens SBW25-INTG PFLU_RS04950 ATP-dependent RNA helicase RhlB insig. 45 65
  Pseudomonas sp. DMC3 GFF1932 ATP-dependent RNA helicase RhlB cofit 45 65
  Ralstonia solanacearum PSI07 RPSI07_RS13580 ATP-dependent helicase sig. 45 66
  Ralstonia solanacearum GMI1000 RS_RS11095 ATP-dependent helicase sig. 45 65
  Ralstonia sp. UNC404CL21Col ABZR87_RS15540 DEAD/DEAH box helicase sig. 45 64
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS03650 ATP-dependent helicase insig. 45 65
  Ralstonia solanacearum UW163 UW163_RS10020 ATP-dependent helicase insig. 45 65
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS00535 DEAD/DEAH box helicase no data 45 62
  Paraburkholderia graminis OAS925 ABIE53_001438 ATP-dependent RNA helicase RhlE strong 44 67
  Burkholderia phytofirmans PsJN BPHYT_RS06155 DEAD/DEAH box helicase strong 40 77
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00308 Superfamily II DNA and RNA helicase strong 44 65
  Herbaspirillum seropedicae SmR1 HSERO_RS17855 DEAD/DEAH box helicase sig. 44 63
  Castellaniella sp019104865 MT123 ABCV34_RS07925 DEAD/DEAH box helicase cofit 45 66
  Variovorax sp. SCN45 GFF1917 ATP-dependent RNA helicase Bcep18194_A5658 strong 39 85
  Paraburkholderia sabiae LMG 24235 QEN71_RS24485 DEAD/DEAH box helicase insig. 43 66
  Variovorax sp. OAS795 ABID97_RS22030 DEAD/DEAH box helicase strong 41 72
  Cupriavidus basilensis FW507-4G11 RR42_RS14810 DEAD/DEAH box helicase insig. 43 64
  Azospirillum sp. SherDot2 MPMX19_02097 ATP-dependent RNA helicase RhlE insig. 44 63
  Pseudomonas sp. SVBP6 COO64_RS17470 DEAD/DEAH box helicase insig. 38 77
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF222 ATP-dependent RNA helicase Bcep18194_A5658 insig. 40 72
  Pseudomonas aeruginosa PA14 IKLFDK_23280 DEAD/DEAH box helicase cofit 38 79
  Pseudomonas stutzeri RCH2 Psest_0312 Superfamily II DNA and RNA helicases strong 41 63
  Pseudomonas sp. S08-1 OH686_10835 ATP-dependent RNA helicase RhlE cofit 41 66
  Pseudomonas sp. RS175 PFR28_04204 ATP-dependent RNA helicase RhlE sig. 42 63
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2382 ATP-dependent RNA helicase RhlE sig. 42 63
  Pseudomonas fluorescens FW300-N2E3 AO353_08030 DEAD/DEAH box helicase sig. 42 63
  Burkholderia phytofirmans PsJN BPHYT_RS16445 RNA helicase strong 38 77
  Acidovorax sp. GW101-3H11 Ac3H11_1125 ATP-dependent RNA helicase Bcep18194_A5658 no data 42 64
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0964 Superfamily II DNA and RNA helicases sig. 42 66
  Paraburkholderia sabiae LMG 24235 QEN71_RS02265 DEAD/DEAH box helicase strong 42 64
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1048 ATP-dependent RNA helicase RhlE sig. 42 63
  Pseudomonas fluorescens FW300-N2C3 AO356_13590 DEAD/DEAH box helicase sig. 42 63
  Pseudomonas syringae pv. syringae B728a Psyr_0458 Helicase, C-terminal:Type III restriction enzyme, res subunit:DEAD/DEAH box helicase, N-terminal insig. 41 63
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0458 Helicase, C-terminal:Type III restriction enzyme, res subunit:DEAD/DEAH box helicase, N-terminal insig. 41 63
  Cupriavidus basilensis FW507-4G11 RR42_RS02870 RNA helicase sig. 42 63
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4635 ATP-dependent RNA helicase RhlE strong 42 63
  Herbaspirillum seropedicae SmR1 HSERO_RS08565 RNA helicase insig. 41 64
  Pseudomonas sp. BP01 JOY50_RS09795 DEAD/DEAH box helicase insig. 42 63
  Pseudomonas sp. DMC3 GFF174 ATP-dependent RNA helicase RhlE cofit 42 63
  Castellaniella sp019104865 MT123 ABCV34_RS12515 DEAD/DEAH box helicase cofit 38 81
  Pseudomonas fluorescens SBW25 PFLU_RS28180 DEAD/DEAH box helicase cofit 42 63
  Pseudomonas fluorescens SBW25-INTG PFLU_RS28180 DEAD/DEAH box helicase sig. 42 63