Homologs of Rv3201c from Mycobacterium tuberculosis H37Rv

Probable ATP-dependent DNA helicase
SEED: ATP-dependent DNA helicase SCO5184
KEGG: DNA helicase II / ATP-dependent DNA helicase PcrA

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Mycobacterium tuberculosis H37Rv Rv3201c Probable ATP-dependent DNA helicase strong 100 100
o Bifidobacterium breve UCC2003 BBR_RS12980 ATP-dependent DNA helicase UvrD/REP family strong 28 96
  Mycobacterium tuberculosis H37Rv Rv0949 Probable ATP-dependent DNA helicase II UvrD1 insig. 27 70
  Serratia liquefaciens MT49 IAI46_00735 DNA helicase II strong 26 61
  Paraburkholderia sabiae LMG 24235 QEN71_RS05110 3'-5' exonuclease no data 26 67
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS16965 DNA helicase II strong 27 67
  Erwinia amylovora T8 OLJFJH_06425 DNA helicase II sig. 25 60
  Marinobacter adhaerens HP15 HP15_3403 UvrD/REP helicase strong 25 68
  Rhodanobacter denitrificans MT42 LRK55_RS06595 DNA helicase II no data 26 68
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS07840 ATP-dependent helicase no data 23 68
  Rhodospirillum rubrum S1H Rru_A1536 UvrD/REP helicase (NCBI) strong 27 73
  Burkholderia phytofirmans PsJN BPHYT_RS13840 DNA-dependent helicase no data 26 67
  Ralstonia sp. UNC404CL21Col ABZR87_RS15705 UvrD-helicase domain-containing protein sig. 27 67
  Rahnella sp. WP5 EX31_RS15175 DNA helicase II insig. 25 61
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS06850 DNA helicase II sig. 27 68
  Marinobacter adhaerens HP15 HP15_214 DNA helicase, ATP-dependent, RepA type no data 24 69
  Erwinia tracheiphila SCR3 LU632_RS24125 uvrD DNA helicase II no data 25 67
  Ralstonia solanacearum PSI07 RPSI07_RS13455 DNA-dependent helicase no data 27 67
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04469 ATP-dependent DNA helicase UvrD no data 26 67
  Agrobacterium fabrum C58 Atu2057 DNA helicase II sig. 25 70
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_08770 uvrD DNA helicase II no data 25 67
  Variovorax sp. SCN45 GFF4000 ATP-dependent DNA helicase UvrD/PcrA (EC 3.6.4.12) cofit 25 69
  Rhodanobacter sp. FW510-T8 OKGIIK_16775 DNA helicase insig. 27 70
  Caulobacter crescentus NA1000 CCNA_01596 DNA helicase II strong 27 61
  Caulobacter crescentus NA1000 Δfur CCNA_01596 DNA helicase II cofit 27 61
  Paraburkholderia graminis OAS925 ABIE53_002936 DNA helicase-2/ATP-dependent DNA helicase PcrA no data 26 67
  Acinetobacter baumannii LAC-4 RR41_RS14860 DNA helicase Rep no data 23 71
  Bacteroides stercoris CC31F HMPREF1181_RS16505 UvrD-helicase domain-containing protein insig. 23 70
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS12980 ATP-dependent DNA helicase no data 23 70
  Enterobacter asburiae PDN3 EX28DRAFT_4449 ATP-dependent DNA helicase Rep (EC 3.6.1.-) no data 24 69
  Ralstonia solanacearum GMI1000 RS_RS11220 DNA-dependent helicase insig. 27 67
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0249 Superfamily I DNA and RNA helicases strong 25 70
  Bacteroides thetaiotaomicron VPI-5482 BT0657 ATP-dependent DNA helicase (NCBI ptt file) no data 25 60
  Phaeobacter inhibens DSM 17395 PGA1_c09450 DNA helicase II UvrD strong 24 69
  Bifidobacterium breve UCC2003 BBR_RS14985 ATP-dependent DNA helicase PcrA strong 24 74
  Escherichia fergusonii Becca EFB2_04860 ATP-dependent DNA helicase Rep no data 24 69
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS15370 DNA helicase II cofit 25 60
  Methylophilus sp. DMC18 GFF586 ATP-dependent DNA helicase Rep no data 24 73
  Pantoea sp. MT58 IAI47_18390 DNA helicase II insig. 25 60
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_04276 ATP-dependent DNA helicase Rep strong 24 69
  Klebsiella michiganensis M5al BWI76_RS01220 DNA-dependent helicase II strong 25 60
  Escherichia coli BW25113 b3778 rep DNA helicase and single-stranded DNA-dependent ATPase (NCBI) strong 24 69
  Escherichia coli BL21 ECD_03656 DNA helicase and single-stranded DNA-dependent ATPase no data 24 69
  Escherichia coli ECOR27 NOLOHH_06745 rep DNA helicase Rep no data 24 69
  Escherichia coli ECRC62 BNILDI_04780 rep DNA helicase Rep insig. 24 69
  Escherichia coli ECOR38 HEPCGN_13320 rep DNA helicase Rep strong 24 69
  Escherichia coli Nissle 1917 ECOLIN_RS21690 DNA helicase Rep strong 24 69
  Fusobacterium nucleatum SB010 HUW76_07175 UvrD-helicase domain-containing protein strong 20 59
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS03775 DNA-dependent helicase no data 27 67
  Ralstonia solanacearum UW163 UW163_RS09895 DNA-dependent helicase no data 27 67
  Dechlorosoma suillum PS Dsui_1227 DNA/RNA helicase, superfamily I strong 26 71
  Rhizobium sp. OAE497 ABIE40_RS11670 UvrD-helicase domain-containing protein sig. 24 70
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2894 ATP-dependent DNA helicase Rep no data 24 69
  Escherichia coli ECRC100 OKFHMN_14610 rep DNA helicase Rep no data 23 69
  Escherichia coli ECRC101 MCAODC_05115 rep DNA helicase Rep no data 23 69
  Escherichia coli ECRC102 NIAGMN_12365 rep DNA helicase Rep no data 23 69
  Escherichia coli ECRC98 JDDGAC_18230 rep DNA helicase Rep no data 23 69
  Escherichia coli ECRC99 KEDOAH_13540 rep DNA helicase Rep no data 23 69
  Lysobacter sp. OAE881 ABIE51_RS01985 DNA helicase II strong 27 60
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5598 ATP-dependent DNA helicase UvrD/PcrA no data 25 68
  Enterobacter sp. TBS_079 MPMX20_04494 ATP-dependent DNA helicase Rep no data 23 69
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0292 Superfamily I DNA and RNA helicases no data 22 68
  Burkholderia phytofirmans PsJN BPHYT_RS14580 ATP-dependent DNA helicase insig. 27 67
  Pseudomonas segetis P6 MPMX49_00180 DNA helicase II strong 25 67
  Serratia liquefaciens MT49 IAI46_00565 DNA helicase Rep no data 23 70
  Dickeya dianthicola ME23 DZA65_RS21080 DNA helicase II sig. 25 60
  Pseudomonas sp. SVBP6 COO64_RS01845 uvrD DNA helicase II strong 25 67
  Pectobacterium carotovorum WPP14 HER17_RS01360 DNA helicase II cofit 25 67
  Synechococcus elongatus PCC 7942 Synpcc7942_2168 pcrA ATP-dependent DNA helicase, Rep family insig. 24 69
  Rahnella sp. WP5 EX31_RS15030 DNA helicase Rep no data 23 69
  Acinetobacter radioresistens SK82 MPMX26_02416 ATP-dependent DNA helicase Rep no data 22 70
  Pseudomonas aeruginosa PA14 IKLFDK_26200 DNA helicase II cofit 25 67
  Dickeya dianthicola 67-19 HGI48_RS20035 DNA helicase II sig. 25 69
  Dickeya dadantii 3937 DDA3937_RS20105 DNA helicase Rep no data 24 69
  Klebsiella pneumoniae MKP103 KDGMDA_09520 DNA helicase Rep insig. 24 69
  Kangiella aquimarina DSM 16071 B158DRAFT_0352 ATP-dependent DNA helicase Rep (EC 3.6.1.-) strong 26 44
  Bosea sp. OAE506 ABIE41_RS12730 UvrD-helicase domain-containing protein insig. 28 43
  Erwinia amylovora T8 OLJFJH_06255 DNA helicase Rep no data 24 69
  Rhizobium sp. OAE497 ABIE40_RS02665 ATP-dependent helicase insig. 27 68
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS03560 3'-5' exonuclease strong 23 70
  Pseudomonas stutzeri RCH2 Psest_4098 Superfamily I DNA and RNA helicases strong 25 67
  Klebsiella michiganensis M5al BWI76_RS01020 DNA helicase Rep no data 23 69
  Pseudomonas aeruginosa PA14 IKLFDK_26970 DNA helicase Rep no data 24 61
  Rhodopseudomonas palustris CGA009 TX73_014510 ATP-dependent helicase insig. 28 68
  Sphingobium sp. HT1-2 GFF1640 ATP-dependent DNA helicase UvrD/PcrA (EC 3.6.4.12) insig. 26 62
  Bacteroides ovatus ATCC 8483 BACOVA_02365 UvrD/REP helicase insig. 24 60
  Dechlorosoma suillum PS Dsui_0933 DNA/RNA helicase, superfamily I no data 24 70
  Herbaspirillum seropedicae SmR1 HSERO_RS13955 ATP-dependent DNA helicase insig. 30 41
  Pectobacterium carotovorum WPP14 HER17_RS01120 DNA helicase Rep no data 23 69
  Cupriavidus basilensis FW507-4G11 RR42_RS15090 DNA helicase strong 28 44
  Pseudomonas sp. SVBP6 COO64_RS01360 rep DNA helicase Rep no data 23 69
  Pseudomonas sp. RS175 PFR28_04523 DNA helicase II sig. 25 67
  Dinoroseobacter shibae DFL-12 Dshi_2483 UvrD/REP helicase (RefSeq) no data 27 43
  Variovorax sp. OAS795 ABID97_RS09150 UvrD-helicase domain-containing protein sig. 26 43
  Pseudomonas fluorescens GW456-L13 PfGW456L13_819 ATP-dependent DNA helicase Rep no data 24 61
  Acidovorax sp. GW101-3H11 Ac3H11_1660 ATP-dependent DNA helicase UvrD/PcrA insig. 27 43
  Pseudomonas sp. BP01 JOY50_RS09155 rep DNA helicase Rep no data 23 66
  Pseudomonas lactucae CFBP13502 GEMAOFIL_00001 ATP-dependent DNA helicase Rep no data 24 61
  Paraburkholderia sabiae LMG 24235 QEN71_RS04400 ATP-dependent helicase insig. 28 67
  Dickeya dadantii 3937 DDA3937_RS19880 DNA helicase II strong 25 60