Homologs of Pf6N2E2_4727 from Pseudomonas fluorescens FW300-N2E2

Cold shock protein CspD

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4727 Cold shock protein CspD insig. 100 100
o Pseudomonas fluorescens FW300-N2C3 AO356_14005 cold-shock protein insig. 89 100
o Pseudomonas sp. RS175 PFR28_04128 Cold shock-like protein CspA insig. 81 100
  Pseudomonas putida KT2440 PP_2463 nucleic acid cold-shock chaperone no data 63 100
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03861 cold-shock DNA-binding protein family no data 65 90
o Paraburkholderia graminis OAS925 ABIE53_004916 CspA family cold shock protein no data 65 90
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS00535 cold-shock protein no data 63 97
  Pseudomonas sp. RS175 PFR28_02727 Cold shock protein CapB strong 61 100
  Pseudomonas sp. DMC3 GFF907 Cold shock protein CapB cofit 61 100
  Pseudomonas lactucae CFBP13502 GEMAOFIL_03901 Cold shock protein CapB cofit 61 100
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3902 Cold shock protein CspG no data 61 100
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_6025 Cold shock protein CspG no data 61 100
  Pseudomonas fluorescens FW300-N2E3 AO353_20865 cold-shock protein strong 61 100
  Pseudomonas fluorescens FW300-N2C3 AO356_00920 cold-shock protein strong 61 100
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_171 Cold shock protein CspG no data 61 100
  Burkholderia phytofirmans PsJN BPHYT_RS33480 cold-shock protein no data 63 90
  Pseudomonas sp. SVBP6 COO64_RS10375 cold-shock protein insig. 61 100
o Ralstonia sp. UNC404CL21Col ABZR87_RS00445 cold-shock protein strong 70 87
  Ralstonia sp. UNC404CL21Col ABZR87_RS19675 cold-shock protein insig. 63 91
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03525 cold-shock DNA-binding protein family sig. 62 90
  Pseudomonas sp. BP01 JOY50_RS04315 cold-shock protein insig. 60 100
  Paraburkholderia graminis OAS925 ABIE53_004735 CspA family cold shock protein strong 62 90
  Burkholderia phytofirmans PsJN BPHYT_RS10920 cold-shock protein no data 63 90
  Shewanella amazonensis SB2B Sama_2058 cold-shock DNA-binding domain-containing protein (RefSeq) sig. 63 90
  Herbaspirillum seropedicae SmR1 HSERO_RS15195 cold-shock protein no data 62 90
  Paraburkholderia sabiae LMG 24235 QEN71_RS39145 cold-shock protein no data 62 90
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS18735 cold-shock protein insig. 67 87
o Ralstonia solanacearum GMI1000 RS_RS22215 cold-shock protein sig. 67 87
o Ralstonia solanacearum PSI07 RPSI07_RS04860 cold-shock protein no data 67 87
o Ralstonia solanacearum UW163 UW163_RS20395 cold-shock protein insig. 67 87
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01154 cold-shock DNA-binding protein family no data 62 90
  Paraburkholderia graminis OAS925 ABIE53_002280 CspA family cold shock protein no data 62 90
  Ralstonia solanacearum GMI1000 RS_RS12380 cold-shock protein no data 67 87
  Shewanella sp. ANA-3 Shewana3_1751 cold-shock DNA-binding protein family protein (RefSeq) strong 62 90
  Shewanella oneidensis MR-1 SO2628 cspD stress response protein CspD (NCBI ptt file) strong 62 90
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS04820 cold-shock protein no data 69 87
  Ralstonia solanacearum UW163 UW163_RS08850 cold-shock protein no data 69 87
  Pseudomonas fluorescens SBW25 PFLU_RS20330 cold-shock protein insig. 60 100
  Pseudomonas fluorescens SBW25-INTG PFLU_RS20330 cold-shock protein strong 60 100
  Pseudomonas orientalis W4I3 QF045_RS20505 cold-shock protein sig. 60 100
  Pseudomonas simiae WCS417 PS417_18355 DNA-binding protein strong 60 100
  Shewanella loihica PV-4 Shew_1564 cold-shock DNA-binding domain-containing protein (RefSeq) sig. 62 90
  Burkholderia phytofirmans PsJN BPHYT_RS34185 cold-shock protein sig. 59 90
  Pseudomonas sp. BP01 JOY50_RS28295 cold-shock protein no data 59 100
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS13825 cold-shock protein no data 59 99
  Paraburkholderia sabiae LMG 24235 QEN71_RS36275 cold-shock protein no data 62 90
  Rhodanobacter sp. FW510-T8 OKGIIK_03595 cspC cold-shock protein no data 59 99
  Ralstonia solanacearum PSI07 RPSI07_RS12565 cold-shock protein no data 69 87
  Paraburkholderia sabiae LMG 24235 QEN71_RS02995 cold shock domain-containing protein CspD sig. 66 87
  Paraburkholderia sabiae LMG 24235 QEN71_RS41860 cold-shock protein no data 60 90
  Paraburkholderia sabiae LMG 24235 QEN71_RS43010 cold-shock protein insig. 60 90
  Cupriavidus basilensis FW507-4G11 RR42_RS37535 cold-shock protein no data 57 90
  Rhodanobacter denitrificans MT42 LRK55_RS14485 cold-shock protein no data 59 99
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS14770 cold-shock protein no data 59 99
  Burkholderia phytofirmans PsJN BPHYT_RS15720 cold-shock protein no data 64 87
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04084 cold-shock DNA-binding protein family no data 64 87
  Paraburkholderia graminis OAS925 ABIE53_003308 CspA family cold shock protein no data 64 87
  Rhodanobacter denitrificans MT42 LRK55_RS14490 cold-shock protein cofit 59 99
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS14775 cold-shock protein strong 59 99
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS13820 cold-shock protein insig. 59 99
  Paraburkholderia sabiae LMG 24235 QEN71_RS35875 cold-shock protein insig. 58 91
  Alteromonas macleodii MIT1002 MIT1002_01248 Cold shock-like protein CspG insig. 56 97
  Pseudomonas stutzeri RCH2 Psest_2025 cold shock domain protein CspD strong 59 94
  Rhodanobacter sp. FW510-T8 OKGIIK_03600 cspC cold-shock protein sig. 59 99
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS23260 cold-shock protein no data 59 91
  Ralstonia solanacearum GMI1000 RS_RS17205 cold-shock protein strong 59 91
  Ralstonia solanacearum PSI07 RPSI07_RS00010 cold-shock protein no data 59 91
  Ralstonia solanacearum UW163 UW163_RS16510 cold-shock protein no data 59 91
  Burkholderia phytofirmans PsJN BPHYT_RS15270 cold-shock protein no data 59 90
  Paraburkholderia graminis OAS925 ABIE53_003225 CspA family cold shock protein sig. 59 90
  Paraburkholderia sabiae LMG 24235 QEN71_RS03700 cold-shock protein insig. 59 90
  Shewanella loihica PV-4 Shew_1165 cold-shock DNA-binding domain-containing protein (RefSeq) no data 60 90
  Ralstonia sp. UNC404CL21Col ABZR87_RS16270 cold-shock protein strong 58 91
  Burkholderia phytofirmans PsJN BPHYT_RS17545 cold-shock protein sig. 60 90
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05686 cold-shock DNA-binding protein family no data 60 90
  Paraburkholderia graminis OAS925 ABIE53_003669 CspA family cold shock protein insig. 60 90
  Methylophilus sp. DMC18 GFF958 Cold shock protein CspV insig. 59 90
  Cupriavidus basilensis FW507-4G11 RR42_RS20855 cold-shock protein sig. 57 90
  Vibrio cholerae E7946 ATCC 55056 CSW01_14830 cold-shock protein CspA no data 56 97
  Castellaniella sp019104865 MT123 ABCV34_RS05315 cold-shock protein insig. 63 89
  Pseudomonas syringae pv. syringae B728a Psyr_2160 cold-shock DNA-binding protein family insig. 58 96
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2160 cold-shock DNA-binding protein family no data 58 96
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS11915 cold-shock protein insig. 61 87
  Rhodanobacter sp. FW510-T8 OKGIIK_07815 cspC cold-shock protein no data 61 87
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3660.1 Cold shock protein CspD insig. 55 91
  Cupriavidus basilensis FW507-4G11 RR42_RS17115 cold-shock protein no data 67 87
  Pseudomonas lactucae CFBP13502 GEMAOFIL_04142 putative cold shock protein A no data 64 87
  Herbaspirillum seropedicae SmR1 HSERO_RS07020 cold-shock protein no data 61 87
  Dechlorosoma suillum PS Dsui_0007 cold shock protein insig. 61 87
  Pseudomonas segetis P6 ACVTMO_RS12625 cspD cold shock domain-containing protein CspD insig. 59 91
  Paraburkholderia sabiae LMG 24235 QEN71_RS27700 cold-shock protein no data 57 90
  Rhodanobacter denitrificans MT42 LRK55_RS16740 cold-shock protein no data 57 90
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS17025 cold-shock protein insig. 57 90
  Pseudomonas syringae pv. syringae B728a Psyr_3185 cold-shock DNA-binding protein family no data 60 91
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3185 cold-shock DNA-binding protein family no data 60 91
  Serratia liquefaciens MT49 IAI46_16260 transcription antiterminator/RNA stability regulator CspE no data 54 97
  Lysobacter sp. OAE881 ABIE51_RS12600 cold-shock protein insig. 58 99
  Pseudomonas sp. S08-1 OH686_00225 cold shock domain protein CspD insig. 57 93
  Pseudomonas sp. S08-1 OH686_17410 Cold shock protein of CSP family no data 60 96
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.2268.1 hypothetical protein no data 60 96