Homologs of PP_2890 from Pseudomonas putida KT2440

exodeoxyribonuclease III / apurinic/apyrimidinic endodeoxyribonuclease VI
SEED: Exodeoxyribonuclease III (EC 3.1.11.2)
KEGG: exodeoxyribonuclease III

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas putida KT2440 PP_2890 exodeoxyribonuclease III / apurinic/apyrimidinic endodeoxyribonuclease VI insig. 100 100
o Pseudomonas sp. BP01 JOY50_RS05870 xthA exodeoxyribonuclease III insig. 97 100
o Pseudomonas sp. SVBP6 COO64_RS24405 xthA exodeoxyribonuclease III no data 91 100
o Pseudomonas fluorescens GW456-L13 PfGW456L13_2599 Exodeoxyribonuclease III (EC 3.1.11.2) insig. 90 100
o Pseudomonas fluorescens FW300-N2C3 AO356_01060 exonuclease III insig. 89 100
o Pseudomonas fluorescens FW300-N2E3 AO353_27875 exonuclease III insig. 89 100
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_142 Exodeoxyribonuclease III (EC 3.1.11.2) strong 89 100
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3995 Exodeoxyribonuclease III (EC 3.1.11.2) no data 89 100
o Pseudomonas fluorescens SBW25 PFLU_RS18930 exodeoxyribonuclease III insig. 89 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS18930 exodeoxyribonuclease III sig. 89 100
o Pseudomonas sp. RS175 PFR28_02754 Exodeoxyribonuclease III insig. 88 100
o Pseudomonas simiae WCS417 PS417_16980 exonuclease III sig. 88 100
o Pseudomonas orientalis W4I3 QF045_RS18655 exodeoxyribonuclease III insig. 87 100
o Pseudomonas sp. DMC3 GFF1481 Exodeoxyribonuclease III insig. 86 100
o Pseudomonas lactucae CFBP13502 GEMAOFIL_03704 Exodeoxyribonuclease III cofit 87 100
o Pseudomonas syringae pv. syringae B728a Psyr_2476 Exodeoxyribonuclease III insig. 85 100
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2476 Exodeoxyribonuclease III insig. 85 100
o Pseudomonas aeruginosa MRSN321 DY961_RS04905 xthA;go_function=DNA exodeoxyribonuclease III insig. 79 100
o Pseudomonas aeruginosa PUPa3 DQ20_RS35805 xthA;go_function=DNA exodeoxyribonuclease III sig. 79 100
o Pseudomonas aeruginosa PA14 IKLFDK_12510 exodeoxyribonuclease III sig. 79 100
o Pseudomonas segetis P6 ACVTMO_RS11835 xthA exodeoxyribonuclease III insig. 82 100
o Pseudomonas sp. S08-1 OH686_00905 exodeoxyribonuclease III insig. 79 100
o Pseudomonas stutzeri RCH2 Psest_2130 exodeoxyribonuclease III sig. 75 100
o Dickeya dadantii 3937 DDA3937_RS10310 exodeoxyribonuclease III sig. 71 100
o Dickeya dianthicola 67-19 HGI48_RS10320 exodeoxyribonuclease III insig. 70 100
o Dickeya dianthicola ME23 DZA65_RS10795 exodeoxyribonuclease III insig. 70 100
o Serratia liquefaciens MT49 IAI46_14290 exodeoxyribonuclease III insig. 70 100
o Pectobacterium carotovorum WPP14 HER17_RS11085 exodeoxyribonuclease III cofit 69 100
o Shewanella sp. ANA-3 Shewana3_1503 exonuclease III (RefSeq) strong 68 99
o Shewanella oneidensis MR-1 SO3037 xth exodeoxyribonuclease III (NCBI ptt file) sig. 68 99
o Rahnella sp. WP5 EX31_RS06330 exodeoxyribonuclease III insig. 68 99
o Escherichia coli ECRC100 OKFHMN_26900 xthA exodeoxyribonuclease III cofit 67 99
o Escherichia coli ECRC101 MCAODC_18510 xthA exodeoxyribonuclease III insig. 67 99
o Escherichia coli ECRC102 NIAGMN_01165 xthA exodeoxyribonuclease III cofit 67 99
o Escherichia coli ECRC98 JDDGAC_01475 xthA exodeoxyribonuclease III sig. 67 99
o Escherichia coli ECRC99 KEDOAH_01210 xthA exodeoxyribonuclease III no data 67 99
o Escherichia coli BL21 ECD_01718 exonuclease III no data 67 99
o Escherichia coli ECOR27 NOLOHH_17415 xthA exodeoxyribonuclease III insig. 67 99
o Escherichia coli ECRC62 BNILDI_16200 xthA exodeoxyribonuclease III cofit 67 99
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01983 Exodeoxyribonuclease III sig. 67 99
o Escherichia coli BW25113 b1749 xthA exonuclease III (NCBI) strong 67 99
o Erwinia amylovora T8 OLJFJH_13265 exodeoxyribonuclease III insig. 67 100
o Escherichia fergusonii Becca EFB2_02244 Exodeoxyribonuclease III insig. 67 99
o Enterobacter asburiae PDN3 EX28DRAFT_1753 exodeoxyribonuclease III insig. 67 99
o Escherichia coli ECOR38 HEPCGN_05265 xthA exodeoxyribonuclease III insig. 67 99
o Escherichia coli Nissle 1917 ECOLIN_RS09750 exodeoxyribonuclease III insig. 67 99
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS02825 exodeoxyribonuclease III cofit 68 99
o Klebsiella michiganensis M5al BWI76_RS11665 exodeoxyribonuclease III insig. 67 99
o Klebsiella pneumoniae MKP103 KDGMDA_19345 exodeoxyribonuclease III insig. 67 99
o Enterobacter sp. TBS_079 MPMX20_01864 Exodeoxyribonuclease III sig. 67 99
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3490 Exodeoxyribonuclease III (EC 3.1.11.2) strong 66 99
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_22660 xthA exodeoxyribonuclease III cofit 65 100
o Erwinia tracheiphila SCR3 LU632_RS12950 xthA exodeoxyribonuclease III insig. 65 100
o Pantoea sp. MT58 IAI47_08990 exodeoxyribonuclease III sig. 67 99
o Shewanella loihica PV-4 Shew_2262 exonuclease III (RefSeq) no data 63 99
o Vibrio cholerae E7946 ATCC 55056 CSW01_09315 exodeoxyribonuclease III insig. 63 99
o Alteromonas macleodii MIT1002 MIT1002_01652 Exodeoxyribonuclease III insig. 62 99
o Marinobacter adhaerens HP15 HP15_1776 exonuclease III insig. 62 99
o Shewanella amazonensis SB2B Sama_2139 exodeoxyribonuclease III (RefSeq) sig. 64 100
o Kangiella aquimarina DSM 16071 B158DRAFT_1291 exodeoxyribonuclease III cofit 58 100
  Pseudomonas putida KT2440 PP_2707 putative Exodeoxyribonuclease III insig. 38 100
  Pseudomonas sp. BP01 JOY50_RS03075 xth exodeoxyribonuclease III no data 38 100
  Agrobacterium fabrum C58 Atu1714 exonuclease III strong 35 98
  Lysobacter sp. OAE881 ABIE51_RS09210 exodeoxyribonuclease III insig. 37 100
  Rhodopseudomonas palustris CGA009 TX73_014820 exodeoxyribonuclease III insig. 34 100
  Bosea sp. OAE506 ABIE41_RS06625 exodeoxyribonuclease III insig. 36 100
  Sinorhizobium meliloti 1021 SMc02077 exodeoxyribonuclease III protein sig. 34 100
  Herbaspirillum seropedicae SmR1 HSERO_RS15630 exodeoxyribonuclease III insig. 37 98
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03037 Exodeoxyribonuclease III (EC 3.1.11.2) insig. 36 100
  Ralstonia sp. UNC404CL21Col ABZR87_RS13495 exodeoxyribonuclease III strong 35 98
  Pseudomonas stutzeri RCH2 Psest_1187 exodeoxyribonuclease III strong 37 100
  Rhizobium sp. OAE497 ABIE40_RS08420 exodeoxyribonuclease III sig. 33 98
  Variovorax sp. SCN45 GFF3064 Exodeoxyribonuclease III (EC 3.1.11.2) insig. 37 100
  Xanthobacter sp. DMC5 GFF859 Exodeoxyribonuclease III insig. 34 100
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS01700 exodeoxyribonuclease III insig. 35 98
  Ralstonia solanacearum UW163 UW163_RS15010 exodeoxyribonuclease III insig. 35 98
  Variovorax sp. OAS795 ABID97_RS09955 exodeoxyribonuclease III strong 37 100
  Magnetospirillum magneticum AMB-1 AMB_RS12755 exodeoxyribonuclease III cofit 34 100
  Synechococcus elongatus PCC 7942 Synpcc7942_2607 xthA Exodeoxyribonuclease III strong 37 100
  Pseudomonas orientalis W4I3 QF045_RS16930 exodeoxyribonuclease III insig. 36 100
  Paraburkholderia graminis OAS925 ABIE53_005114 exodeoxyribonuclease-3 insig. 36 100
  Xanthobacter sp. DMC5 GFF2821 Exodeoxyribonuclease III insig. 37 100
  Lysobacter sp. OAE881 ABIE51_RS01755 exodeoxyribonuclease III insig. 36 100
  Pseudomonas sp. DMC3 GFF767 Exodeoxyribonuclease III insig. 34 100
  Pseudomonas sp. RS175 PFR28_01207 Exodeoxyribonuclease III insig. 34 100
  Pseudomonas fluorescens FW300-N2C3 AO356_01850 exodeoxyribonuclease III insig. 34 100
  Ralstonia solanacearum PSI07 RPSI07_RS15785 exodeoxyribonuclease III insig. 35 98
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS14930 exodeoxyribonuclease III strong 35 100
  Synechocystis sp000284455 PCC 6803 SGL_RS12355 exodeoxyribonuclease III cofit 37 100
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_38 Exodeoxyribonuclease III (EC 3.1.11.2) insig. 35 100
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2237 Exodeoxyribonuclease III (EC 3.1.11.2) insig. 34 100
  Dechlorosoma suillum PS Dsui_0044 exodeoxyribonuclease III sig. 37 100
  Ralstonia solanacearum GMI1000 RS_RS08025 exodeoxyribonuclease III insig. 35 98
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3967 Exodeoxyribonuclease III (EC 3.1.11.2) insig. 35 100
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS16670 exodeoxyribonuclease III insig. 36 100
  Methylophilus sp. DMC18 GFF1517 Exodeoxyribonuclease III insig. 34 100
  Sphingobium sp. HT1-2 GFF2556 Exodeoxyribonuclease III (EC 3.1.11.2) cofit 36 100
  Rhizobium sp. OAE497 ABIE40_RS30445 exodeoxyribonuclease III insig. 35 100
  Sinorhizobium meliloti 1021 SMc00956 exodeoxyribonuclease III protein insig. 35 100
  Bacteroides thetaiotaomicron VPI-5482 BT0630 exodeoxyribonuclease (NCBI ptt file) sig. 35 100