Homologs of PP_1063 from Pseudomonas putida KT2440

DNA-binding transcriptional regulator, homocysteine-binding
SEED: Transcriptional activator MetR
KEGG: LysR family transcriptional regulator, regulator for metE and metH

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas putida KT2440 PP_1063 DNA-binding transcriptional regulator, homocysteine-binding strong 100 100
o Pseudomonas sp. RS175 PFR28_03478 HTH-type transcriptional regulator MetR sig. 95 100
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5471 Transcriptional activator MetR sig. 94 100
o Pseudomonas fluorescens FW300-N2C3 AO356_17735 XRE family transcriptional regulator sig. 94 100
o Pseudomonas fluorescens SBW25 PFLU_RS05540 LysR family transcriptional regulator cofit 94 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS05540 LysR family transcriptional regulator strong 94 100
o Pseudomonas fluorescens GW456-L13 PfGW456L13_4778 Transcriptional activator MetR strong 93 100
o Pseudomonas fluorescens FW300-N2E3 AO353_16210 XRE family transcriptional regulator strong 93 100
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_784 Transcriptional activator MetR strong 93 100
o Pseudomonas simiae WCS417 PS417_05455 XRE family transcriptional regulator strong 92 100
o Pseudomonas syringae pv. syringae B728a Psyr_3917 transcriptional regulator, LysR family sig. 92 100
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3917 transcriptional regulator, LysR family insig. 92 100
o Pseudomonas sp. S08-1 OH686_20465 Transcriptional activator MetR cofit 88 100
o Pseudomonas stutzeri RCH2 Psest_1450 Transcriptional regulator no data 88 99
  Pseudomonas putida KT2440 PP_2696 DNA-binding transcriptional regulator, homocysteine-binding insig. 76 99
o Castellaniella sp019104865 MT123 ABCV34_RS04450 LysR substrate-binding domain-containing protein cofit 58 100
o Vibrio cholerae E7946 ATCC 55056 CSW01_08580 HTH-type transcriptional regulator MetR insig. 51 99
o Acidovorax sp. GW101-3H11 Ac3H11_2344 Transcriptional activator MetR strong 53 99
o Variovorax sp. OAS795 ABID97_RS19400 LysR family transcriptional regulator no data 49 99
o Ralstonia solanacearum PSI07 RPSI07_RS02550 LysR family transcriptional regulator strong 48 100
o Acinetobacter radioresistens SK82 MPMX26_01201 HTH-type transcriptional regulator MetR insig. 49 94
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS20315 LysR family transcriptional regulator insig. 47 100
o Ralstonia solanacearum UW163 UW163_RS18860 LysR family transcriptional regulator insig. 47 100
o Dinoroseobacter shibae DFL-12 Dshi_2079 transcriptional regulator, LysR family (RefSeq) strong 47 95
o Cupriavidus basilensis FW507-4G11 RR42_RS30655 LysR family transcriptional regulator strong 48 99
o Ralstonia solanacearum GMI1000 RS_RS20365 LysR family transcriptional regulator strong 48 100
o Enterobacter sp. TBS_079 MPMX20_04452 HTH-type transcriptional regulator MetR strong 49 96
o Burkholderia phytofirmans PsJN BPHYT_RS26650 LysR family transcriptional regulator no data 46 99
  Ralstonia sp. UNC404CL21Col ABZR87_RS20875 LysR family transcriptional regulator strong 47 99
o Enterobacter asburiae PDN3 EX28DRAFT_4493 Transcriptional regulator strong 48 96
o Escherichia coli BL21 ECD_03707 methionine biosynthesis regulon transcriptional regulator cofit 47 96
o Escherichia fergusonii Becca EFB2_04809 HTH-type transcriptional regulator MetR insig. 47 96
o Escherichia coli ECOR27 NOLOHH_06460 metR HTH-type transcriptional regulator MetR cofit 47 96
o Escherichia coli ECOR38 HEPCGN_13030 metR HTH-type transcriptional regulator MetR cofit 47 96
o Escherichia coli ECRC101 OKFHMN_14330 metR HTH-type transcriptional regulator MetR insig. 47 96
o Escherichia coli ECRC101 MCAODC_04835 metR HTH-type transcriptional regulator MetR insig. 47 96
o Escherichia coli ECRC102 NIAGMN_12085 metR HTH-type transcriptional regulator MetR insig. 47 96
o Escherichia coli ECRC62 BNILDI_05070 metR HTH-type transcriptional regulator MetR insig. 47 96
o Escherichia coli ECRC98 JDDGAC_17955 metR HTH-type transcriptional regulator MetR no data 47 96
o Escherichia coli ECRC99 KEDOAH_13820 metR HTH-type transcriptional regulator MetR no data 47 96
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_04223 HTH-type transcriptional regulator MetR insig. 47 96
o Escherichia coli BW25113 b3828 metR DNA-binding transcriptional activator, homocysteine-binding (NCBI) strong 47 96
  Escherichia coli Nissle 1917 ECOLIN_RS21975 HTH-type transcriptional regulator MetR no data 47 96
o Escherichia coli Nissle 1917 ECOLIN_RS30005 HTH-type transcriptional regulator MetR no data 47 96
  Phaeobacter inhibens DSM 17395 PGA1_c11710 transcriptional regulator, LysR family strong 44 95
o Serratia liquefaciens MT49 IAI46_01030 HTH-type transcriptional regulator MetR cofit 50 90
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF253 Transcriptional activator MetR insig. 47 96
o Pantoea sp. MT58 IAI47_18315 HTH-type transcriptional regulator MetR strong 46 96
  Erwinia tracheiphila SCR3 LU632_RS24035 metR HTH-type transcriptional regulator MetR strong 45 99
o Rahnella sp. WP5 EX31_RS25370 HTH-type transcriptional regulator MetR strong 44 96
  Dickeya dadantii 3937 DDA3937_RS20385 HTH-type transcriptional regulator MetR strong 45 96
o Dickeya dianthicola ME23 DZA65_RS00870 HTH-type transcriptional regulator MetR strong 46 96
  Dickeya dianthicola 67-19 HGI48_RS00815 HTH-type transcriptional regulator MetR strong 45 96
o Klebsiella michiganensis M5al BWI76_RS01275 LysR family transcriptional regulator strong 48 96
  Pectobacterium carotovorum WPP14 HER17_RS20690 HTH-type transcriptional regulator MetR strong 45 96
o Shewanella oneidensis MR-1 SO0817 metR transcriptional activator protein MetR (NCBI ptt file) strong 45 94
o Shewanella sp. ANA-3 Shewana3_3470 LysR family transcriptional regulator (RefSeq) cofit 44 94
o Shewanella loihica PV-4 Shew_2987 LysR family transcriptional regulator (RefSeq) strong 46 94
o Shewanella amazonensis SB2B Sama_2628 transcriptional activator protein MetR (RefSeq) strong 44 94
  Marinobacter adhaerens HP15 HP15_458 transcriptional regulator, LysR family protein strong 42 97
  Herbaspirillum seropedicae SmR1 HSERO_RS22770 LysR family transcriptional regulator strong 42 96
  Variovorax sp. SCN45 GFF4176 Transcriptional activator MetR insig. 40 97
o Azospirillum sp. SherDot2 MPMX19_00645 HTH-type transcriptional regulator MetR insig. 43 94
  Agrobacterium fabrum C58 Atu3827 LysR family transcriptional regulator insig. 40 95
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.400.1 Transcriptional activator MetR strong 40 96
  Paraburkholderia sabiae LMG 24235 QEN71_RS19730 LysR family transcriptional regulator strong 39 97
  Variovorax sp. SCN45 GFF796 Transcriptional activator MetR insig. 39 96
  Alteromonas macleodii MIT1002 MIT1002_01119 HTH-type transcriptional regulator GltC strong 39 94
  Azospirillum brasilense Sp245 AZOBR_RS24270 LysR family transcriptional regulator insig. 39 98
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS03450 LysR family transcriptional regulator insig. 29 94
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3633 Transcriptional activator MetR insig. 32 78
  Variovorax sp. SCN45 GFF286 Transcriptional regulator, LysR family insig. 32 79
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04511 DNA-binding transcriptional regulator, LysR family insig. 28 90
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1212.1 transcriptional regulator insig. 28 80
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2139 transcriptional regulator, LysR family insig. 31 79
  Escherichia coli BL21 ECD_00292 transcriptional activator of cyn operon; autorepressor insig. 30 75
  Escherichia coli BW25113 b0338 cynR DNA-binding transcriptional dual regulator (NCBI) insig. 30 75
  Pseudomonas sp. S08-1 OH686_10420 hypothetical protein insig. 28 70
  Escherichia coli ECOR27 NOLOHH_01740 cynR transcriptional regulator CynR cofit 30 75
  Pseudomonas putida KT2440 PP_1028 Transcriptional regulator, LysR family sig. 32 80
  Escherichia coli ECRC101 OKFHMN_08840 cynR transcriptional regulator CynR insig. 30 75
  Escherichia coli ECRC101 MCAODC_28070 cynR transcriptional regulator CynR insig. 30 75
  Escherichia coli ECRC102 NIAGMN_06895 cynR transcriptional regulator CynR insig. 30 75
  Escherichia coli ECRC62 BNILDI_23155 cynR transcriptional regulator CynR insig. 30 75
  Escherichia coli ECRC98 JDDGAC_12495 cynR transcriptional regulator CynR no data 30 75
  Escherichia coli ECRC99 KEDOAH_19125 cynR transcriptional regulator CynR no data 30 75
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03333 HTH-type transcriptional regulator CynR insig. 30 75
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_06353 transcriptional regulator, LysR family insig. 30 78
  Paraburkholderia graminis OAS925 ABIE53_006314 DNA-binding transcriptional LysR family regulator sig. 29 94
  Escherichia coli ECOR38 HEPCGN_07455 cynR transcriptional regulator CynR cofit 29 75
  Bosea sp. OAE506 ABIE41_RS22670 LysR substrate-binding domain-containing protein insig. 29 80
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_06503 LysR family transcriptional regulator, hca operon transcriptional activator no data 29 80
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF103 LysR family transcriptional regulator YnfL insig. 30 79
  Burkholderia phytofirmans PsJN BPHYT_RS30315 LysR family transcriptional regulator insig. 30 78
  Burkholderia phytofirmans PsJN BPHYT_RS10680 LysR family transcriptional regulator insig. 32 79
  Variovorax sp. OAS795 ABID97_RS13320 LysR family transcriptional regulator insig. 31 78
  Dickeya dadantii 3937 DDA3937_RS10670 LysR family transcriptional regulator insig. 29 79
  Cupriavidus basilensis FW507-4G11 RR42_RS23510 LysR family transcriptional regulator insig. 30 79
  Dickeya dianthicola ME23 DZA65_RS11140 LysR family transcriptional regulator insig. 29 79
  Cupriavidus basilensis FW507-4G11 RR42_RS03905 hypothetical protein insig. 30 96