Homologs of PP_1061 from Pseudomonas putida KT2440

putative ATP-dependent DNA helicase lhr
SEED: FIG003033: Helicase domain protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas putida KT2440 PP_1061 putative ATP-dependent DNA helicase lhr insig. 100 100
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4905 Lhr-like helicases insig. 72 98
o Pseudomonas fluorescens FW300-N2C3 AO356_14865 ATP-dependent DNA helicase insig. 72 99
o Pseudomonas sp. RS175 PFR28_03962 ATP-dependent RNA helicase SrmB insig. 71 99
o Pseudomonas fluorescens FW300-N2E3 AO353_06780 DNA repair helicase Lhr (from data) sig. 71 99
o Pseudomonas fluorescens GW456-L13 PfGW456L13_1299 Lhr-like helicases insig. 71 99
o Pseudomonas fluorescens SBW25 PFLU_RS26960 DEAD/DEAH box helicase insig. 71 98
o Pseudomonas fluorescens SBW25-INTG PFLU_RS26960 DEAD/DEAH box helicase insig. 71 98
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2634 Lhr-like helicases insig. 71 97
o Paraburkholderia sabiae LMG 24235 QEN71_RS10885 DEAD/DEAH box helicase insig. 63 99
o Pseudomonas stutzeri RCH2 Psest_2922 Lhr-like helicases insig. 67 98
o Burkholderia phytofirmans PsJN BPHYT_RS27095 ATP-dependent DNA helicase insig. 64 98
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02925 ATP dependent helicase, Lhr family insig. 62 99
o Rhodanobacter sp. FW510-T8 OKGIIK_14210 ATP-dependent DNA helicase insig. 62 98
o Variovorax sp. SCN45 GFF1558 Uncharacterized ATP-dependent DNA helicase PA3272 insig. 61 98
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS14645 DNA repair helicase Lhr (from data) cofit 61 99
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.2235.1 Lhr-like helicases insig. 61 98
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS07665 DEAD/DEAH box helicase insig. 61 98
o Rhodanobacter denitrificans MT42 LRK55_RS07400 DEAD/DEAH box helicase insig. 61 98
  Paraburkholderia graminis OAS925 ABIE53_005864 ATP-dependent Lhr-like helicase strong 60 57
  Paraburkholderia graminis OAS925 ABIE53_005864 ATP-dependent Lhr-like helicase strong 71 41
o Mycobacterium tuberculosis H37Rv Rv3296 Probable ATP-dependent helicase Lhr (large helicase-related protein) insig. 35 95
o Escherichia coli ECOR38 HEPCGN_05805 lhr ATP-dependent helicase cofit 32 96
o Escherichia coli ECRC101 OKFHMN_27420 lhr ATP-dependent helicase insig. 32 96
o Escherichia coli ECRC101 MCAODC_17990 lhr ATP-dependent helicase insig. 32 96
o Escherichia coli ECRC102 NIAGMN_00645 lhr ATP-dependent helicase insig. 32 96
o Escherichia coli ECRC99 KEDOAH_00690 lhr ATP-dependent helicase no data 32 96
o Escherichia coli ECRC98 JDDGAC_02010 lhr ATP-dependent helicase no data 32 96
o Escherichia coli ECOR27 NOLOHH_17940 lhr ATP-dependent helicase insig. 32 96
o Escherichia coli ECRC62 BNILDI_16730 lhr ATP-dependent helicase insig. 32 96
o Escherichia coli BL21 ECD_01623 putative ATP-dependent helicase insig. 31 96
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02072 ATP-dependent RNA helicase SrmB insig. 32 96
o Escherichia coli BW25113 b1653 lhr predicted ATP-dependent helicase (NCBI) insig. 31 96
  Pantoea sp. MT58 IAI47_18890 ATP-dependent helicase insig. 38 60
  Methanococcus maripaludis JJ MMJJ_RS08465 ATP-dependent helicase insig. 32 58
  Methanococcus maripaludis S2 MMP_RS05890 ATP-dependent helicase insig. 32 57
  Bifidobacterium breve UCC2003 BBR_RS16460 ATP-dependent helicase insig. 31 42
  Azospirillum brasilense Sp245 AZOBR_RS09305 helicase insig. 33 48
  Dinoroseobacter shibae DFL-12 Dshi_1119 DNA damage response helicase, ligase-associated (from data) strong 34 44
  Phaeobacter inhibens DSM 17395 PGA1_c06040 DNA damage response helicase, ligase-associated (from data) sig. 32 46
  Sinorhizobium meliloti 1021 SMc02237 DNA damage response helicase, ligase-associated (from data) strong 30 56
  Azospirillum sp. SherDot2 MPMX19_01581 ATP-dependent RNA helicase DbpA insig. 33 44
  Herbaspirillum seropedicae SmR1 HSERO_RS11390 DEAD/DEAH box helicase insig. 33 40
  Bosea sp. OAE506 ABIE41_RS24120 ligase-associated DNA damage response DEXH box helicase insig. 32 45
  Alteromonas macleodii MIT1002 MIT1002_03764 ATP-dependent helicase insig. 27 57
  Agrobacterium fabrum C58 Atu0494 large atp-dependant helicase-related protein strong 33 37
  Rhizobium sp. OAE497 ABIE40_RS02475 ligase-associated DNA damage response DEXH box helicase insig. 31 45
  Caulobacter crescentus NA1000 CCNA_02121 ATP-dependent helicase strong 29 49
  Caulobacter crescentus NA1000 Δfur CCNA_02121 ATP-dependent helicase cofit 29 49
  Sphingomonas koreensis DSMZ 15582 Ga0059261_1941 DNA damage response helicase, ligase-associated (from data) strong 35 37
  Variovorax sp. OAS795 ABID97_RS00385 ligase-associated DNA damage response DEXH box helicase insig. 30 47
  Variovorax sp. SCN45 GFF3698 ATP-dependent, 3'-5' DNA helicase with strand annealing activity insig. 31 47
  Rhodopseudomonas palustris CGA009 TX73_004160 ligase-associated DNA damage response DEXH box helicase insig. 33 34
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS20800 ligase-associated DNA damage response DEXH box helicase insig. 28 45
  Pseudomonas stutzeri RCH2 Psest_1647 Lhr-like helicases sig. 32 44
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS11475 ligase-associated DNA damage response DEXH box helicase insig. 31 37
  Bifidobacterium breve UCC2003 BBR_RS16460 ATP-dependent helicase insig. 48 17
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3657.1 FIG003033: Helicase domain protein insig. 31 47
  Pseudomonas sp. S08-1 OH686_06065 DEXH box helicase, DNA ligase-associated insig. 31 44
  Ralstonia sp. UNC404CL21Col ABZR87_RS21360 ligase-associated DNA damage response DEXH box helicase insig. 32 45
  Pseudomonas simiae WCS417 PS417_06390 DEAD/DEAH box helicase insig. 32 38
  Pseudomonas fluorescens SBW25 PFLU_RS06455 ligase-associated DNA damage response DEXH box helicase insig. 32 38
  Pseudomonas fluorescens SBW25-INTG PFLU_RS06455 ligase-associated DNA damage response DEXH box helicase insig. 32 38
  Paraburkholderia graminis OAS925 ABIE53_004154 ATP-dependent Lhr-like helicase insig. 30 40
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03145 ATP-dependent helicase Lhr and Lhr-like helicase insig. 30 40
  Paraburkholderia sabiae LMG 24235 QEN71_RS30600 ligase-associated DNA damage response DEXH box helicase insig. 31 39
  Acidovorax sp. GW101-3H11 Ac3H11_4923 FIG003033: Helicase domain protein insig. 31 38
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2963 FIG003033: Helicase domain protein insig. 31 43
  Burkholderia phytofirmans PsJN BPHYT_RS22150 DEAD/DEAH box helicase insig. 30 40
  Pseudomonas syringae pv. syringae B728a Psyr_3880 Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal insig. 32 38
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3880 Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal insig. 32 38
  Pseudomonas fluorescens FW300-N2C3 AO356_05520 DNA ligase-associated DEXH box helicase insig. 30 43
  Pseudomonas putida KT2440 PP_1103 ATP-dependent helicase, DEAD box family insig. 29 45
  Pseudomonas sp. RS175 PFR28_00502 hypothetical protein insig. 29 43
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS09090 DNA ligase-associated DEXH box helicase strong 27 39
  Paraburkholderia sabiae LMG 24235 QEN71_RS21550 DEAD/DEAH box helicase insig. 30 32
  Pseudomonas stutzeri RCH2 Psest_0914 Lhr-like helicases insig. 30 32
  Klebsiella michiganensis M5al BWI76_RS21605 ATP-dependent helicase insig. 27 36
  Pseudomonas fluorescens FW300-N2E3 AO353_24235 DEAD/DEAH box helicase insig. 31 24
  Desulfovibrio vulgaris Hildenborough JW710 DVU0256 ATP-dependent RNA helicase, DEAD/DEAH box family (TIGR) insig. 30 24
  Bifidobacterium breve UCC2003 BBR_RS16460 ATP-dependent helicase insig. 27 27
  Pantoea sp. MT58 IAI47_18890 ATP-dependent helicase insig. 28 26
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS03955 DEAD/DEAH box helicase cofit 29 25
  Methanococcus maripaludis S2 MMP_RS02620 DEAD/DEAH box helicase insig. 27 24
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.67.1 ATP-dependent RNA helicase insig. 31 24
  Lysobacter sp. OAE881 ABIE51_RS14440 DEAD/DEAH box helicase insig. 27 24
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_18930 RNA helicase strong 29 25
  Pseudomonas fluorescens FW300-N2C3 AO356_10125 recombinase RecQ insig. 31 24
  Pseudomonas putida KT2440 PP_4766 ATP-dependent RNA helicase strong 28 25
  Cupriavidus basilensis FW507-4G11 RR42_RS14720 RNA helicase no data 27 24
  Pseudomonas stutzeri RCH2 Psest_3505 Superfamily II DNA and RNA helicases strong 27 29
  Methanococcus maripaludis JJ MMJJ_RS00510 DEAD/DEAH box helicase insig. 24 21
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5046 ATP-dependent RNA helicase PA3950 strong 27 25
  Methanococcus maripaludis S2 MMP_RS04625 DEAD/DEAH box helicase sig. 24 21
  Pseudomonas simiae WCS417 PS417_24500 DEAD/DEAH box helicase strong 28 25
  Castellaniella sp019104865 MT123 ABCV34_RS02055 DEAD/DEAH box helicase cofit 29 14
  Mycobacterium tuberculosis H37Rv Rv3649 Probable helicase insig. 27 29
  Pseudomonas putida KT2440 PP_4532 ATP-dependent DEAD-box RNA helicase require for 50S ribosomal subunit biogenesis strong 26 24
  Paraburkholderia graminis OAS925 ABIE53_005247 ATP-dependent DNA helicase RecQ sig. 27 25
  Shewanella loihica PV-4 Shew_2777 DEAD/DEAH box helicase domain-containing protein (RefSeq) insig. 27 24