Homologs of PP_0218 from Pseudomonas putida KT2440

Sensory box protein
SEED: GGDEF domain protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas putida KT2440 PP_0218 Sensory box protein strong 100 100
o Pseudomonas sp. BP01 JOY50_RS18490 dibA phosphodiesterase DibA insig. 95 100
o Pseudomonas sp. SVBP6 COO64_RS12500 dibA phosphodiesterase DibA cofit 82 100
o Pseudomonas fluorescens FW300-N2E3 AO353_11530 diguanylate cyclase strong 73 100
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1729 GGDEF domain protein insig. 72 100
o Pseudomonas simiae WCS417 PS417_00920 diguanylate cyclase strong 72 100
o Pseudomonas fluorescens SBW25 PFLU_RS00935 EAL domain-containing protein cofit 71 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS00935 EAL domain-containing protein strong 71 100
o Pseudomonas fluorescens FW300-N2C3 AO356_10695 diguanylate cyclase strong 72 100
o Pseudomonas orientalis W4I3 QF045_RS03990 EAL domain-containing protein cofit 72 100
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4009 GGDEF domain protein strong 72 100
o Pseudomonas lactucae CFBP13502 GEMAOFIL_00407 hypothetical protein cofit 72 100
o Pseudomonas sp. DMC3 GFF4251 hypothetical protein cofit 74 100
o Pseudomonas fluorescens GW456-L13 PfGW456L13_490 GGDEF domain protein insig. 73 100
o Pseudomonas sp. RS175 PFR28_04760 hypothetical protein strong 72 100
o Pseudomonas syringae pv. syringae B728a Psyr_0086 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 63 100
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0086 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 63 100
  Pseudomonas sp. S08-1 OH686_11550 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 62 89
o Pseudomonas stutzeri RCH2 Psest_0263 PAS domain S-box/diguanylate cyclase (GGDEF) domain sig. 56 99
  Pseudomonas aeruginosa PA14 IKLFDK_24035 GGDEF domain-containing protein insig. 61 87
  Pseudomonas aeruginosa MRSN321 DY961_RS21370 EAL domain-containing protein strong 61 87
  Pseudomonas aeruginosa PUPa3 DQ20_RS37920 EAL domain-containing protein strong 61 87
  Pseudomonas aeruginosa MRSN321 DY961_RS22900 EAL domain-containing protein insig. 51 87
  Pseudomonas aeruginosa PUPa3 DQ20_RS36445 EAL domain-containing protein insig. 51 87
  Pseudomonas sp. S08-1 OH686_14965 Sensory box/GGDEF family protein cofit 50 87
  Pseudomonas aeruginosa PA14 IKLFDK_22535 bifunctional diguanylate cyclase/phosphodiesterase insig. 51 87
  Dechlorosoma suillum PS Dsui_1429 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 46 90
  Pseudomonas fluorescens FW300-N2E3 AO353_07390 diguanylate cyclase insig. 50 87
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2512 sensory box/GGDEF domain/EAL domain protein insig. 50 87
  Pseudomonas sp. RS175 PFR28_04079 Membrane-bound lytic murein transglycosylase F insig. 50 87
  Pseudomonas sp. DMC3 GFF52 hypothetical protein insig. 50 87
  Pseudomonas fluorescens FW300-N2C3 AO356_14260 diguanylate cyclase insig. 50 87
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1185 sensory box/GGDEF domain/EAL domain protein insig. 50 87
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4790 sensory box/GGDEF domain/EAL domain protein sig. 50 87
  Pseudomonas lactucae CFBP13502 GEMAOFIL_05297 Membrane-bound lytic murein transglycosylase F cofit 49 87
  Pseudomonas fluorescens SBW25 PFLU_RS27540 bifunctional diguanylate cyclase/phosphodiesterase insig. 50 86
  Pseudomonas fluorescens SBW25-INTG PFLU_RS27540 bifunctional diguanylate cyclase/phosphodiesterase insig. 50 86
  Pseudomonas simiae WCS417 PS417_25885 diguanylate cyclase insig. 50 86
  Pseudomonas orientalis W4I3 QF045_RS00285 EAL domain-containing protein cofit 49 87
  Pseudomonas syringae pv. syringae B728a Psyr_4642 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 48 87
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4642 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 48 87
  Dechlorosoma suillum PS Dsui_1011 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein insig. 48 87
  Dechlorosoma suillum PS Dsui_1564 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 47 87
  Dechlorosoma suillum PS Dsui_2148 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 47 87
  Pseudomonas sp. SVBP6 COO64_RS22585 EAL domain-containing protein insig. 49 86
  Dechlorosoma suillum PS Dsui_2160 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein insig. 48 88
  Magnetospirillum magneticum AMB-1 AMB_RS06165 CBS domain-containing protein insig. 45 87
  Pseudomonas putida KT2440 PP_0386 Sensory box protein sig. 46 91
  Pseudomonas segetis P6 ACVTMO_RS04275 EAL domain-containing protein insig. 46 91
  Marinobacter adhaerens HP15 HP15_4115 sensory box/GGDEF/EAL family protein cofit 46 86
  Pseudomonas sp. BP01 JOY50_RS18065 bifunctional diguanylate cyclase/phosphodiesterase insig. 48 86
  Shewanella oneidensis MR-1 SO3389 sensory box protein (NCBI ptt file) insig. 46 87
  Magnetospirillum magneticum AMB-1 AMB_RS15005 two-component system response regulator insig. 45 88
  Acidovorax sp. GW101-3H11 Ac3H11_4486 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 46 87
  Pseudomonas sp. DMC3 GFF3964 hypothetical protein insig. 46 86
  Shewanella sp. ANA-3 Shewana3_1161 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) insig. 45 87
  Dechlorosoma suillum PS Dsui_0894 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 45 93
  Pseudomonas simiae WCS417 PS417_24275 diguanylate phosphodiesterase strong 45 86
  Pseudomonas orientalis W4I3 QF045_RS26570 EAL domain-containing protein insig. 46 86
  Cupriavidus basilensis FW507-4G11 RR42_RS11565 diguanylate cyclase insig. 45 87
  Magnetospirillum magneticum AMB-1 AMB_RS11515 DUF3365 domain-containing protein insig. 45 86
  Rhodospirillum rubrum S1H Rru_A2406 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) and Response Regulator Receiver modulation (NCBI) insig. 44 93
  Pseudomonas lactucae CFBP13502 GEMAOFIL_05007 hypothetical protein cofit 46 86
  Pseudomonas fluorescens SBW25 PFLU_RS26190 bifunctional diguanylate cyclase/phosphodiesterase cofit 45 86
  Pseudomonas fluorescens SBW25-INTG PFLU_RS26190 bifunctional diguanylate cyclase/phosphodiesterase sig. 45 86
  Pseudomonas fluorescens FW300-N2E3 AO353_14025 diguanylate phosphodiesterase strong 45 86
  Shewanella loihica PV-4 Shew_0813 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) (RefSeq) insig. 44 87
  Pseudomonas sp. SVBP6 COO64_RS03000 EAL domain-containing protein insig. 43 92
  Dechlorosoma suillum PS Dsui_0749 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 47 87
  Xanthobacter sp. DMC5 GFF1232 hypothetical protein insig. 47 86
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5083 Serine hydroxymethyltransferase (EC 2.1.2.1) sig. 45 86
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2779 Serine hydroxymethyltransferase (EC 2.1.2.1) insig. 45 86
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1452 Serine hydroxymethyltransferase (EC 2.1.2.1) insig. 45 86
  Pseudomonas fluorescens FW300-N2C3 AO356_15730 diguanylate phosphodiesterase insig. 45 86
  Dechlorosoma suillum PS Dsui_0262 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 47 86
  Pseudomonas aeruginosa MRSN321 DY961_RS23425 morA;inference=COORDINATES cyclic di-GMP receptor MorA insig. 45 87
  Pseudomonas aeruginosa PA14 IKLFDK_00505 cyclic di-GMP receptor MorA insig. 45 87
  Pseudomonas aeruginosa PUPa3 DQ20_RS55890 morA;inference=COORDINATES cyclic di-GMP receptor MorA sig. 45 87
  Pseudomonas sp. RS175 PFR28_03785 hypothetical protein insig. 45 86
  Pseudomonas segetis P6 ACVTMO_RS19720 EAL domain-containing protein strong 44 86
  Pseudomonas sp. S08-1 OH686_16235 Sensory box/GGDEF family protein insig. 45 86
  Pseudomonas sp. BP01 JOY50_RS24630 bifunctional diguanylate cyclase/phosphodiesterase insig. 43 92
  Pseudomonas putida KT2440 PP_0672 Sensory box protein sig. 43 92
  Magnetospirillum magneticum AMB-1 AMB_RS23535 PAS domain S-box protein cofit 44 86
  Pseudomonas syringae pv. syringae B728a Psyr_4265 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 44 86
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4265 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 44 86
  Azospirillum sp. SherDot2 MPMX19_00480 hypothetical protein insig. 44 87
  Dechlorosoma suillum PS Dsui_3449 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 43 88
  Shewanella amazonensis SB2B Sama_2405 sensory box protein (RefSeq) insig. 43 92
  Azospirillum brasilense Sp245 AZOBR_RS04390 signal peptide protein cofit 46 86
  Methylophilus sp. DMC18 GFF1786 hypothetical protein insig. 42 87
  Dechlorosoma suillum PS Dsui_2365 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 43 90
  Magnetospirillum magneticum AMB-1 AMB_RS18310 bifunctional diguanylate cyclase/phosphodiesterase cofit 41 87
  Pseudomonas sp. S08-1 OH686_07355 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 43 92
  Lysobacter sp. OAE881 ABIE51_RS17335 EAL domain-containing protein insig. 45 87
  Desulfovibrio vulgaris Miyazaki F DvMF_1530 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) insig. 43 86
  Dechlorosoma suillum PS Dsui_3104 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein strong 43 88
  Pseudomonas sp. SVBP6 COO64_RS01840 EAL domain-containing protein insig. 44 87
  Herbaspirillum seropedicae SmR1 HSERO_RS12780 diguanylate phosphodiesterase sig. 40 92
  Shewanella loihica PV-4 Shew_0041 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) (RefSeq) strong 41 87