Homologs of LRK54_RS10865 from Rhodanobacter denitrificans FW104-10B01

DEAD/DEAH box helicase
SEED: COG0553: Superfamily II DNA/RNA helicases, SNF2 family

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS10865 DEAD/DEAH box helicase sig. 100 100
o Rhodanobacter denitrificans MT42 LRK55_RS10555 DEAD/DEAH box helicase cofit 100 100
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS03655 DEAD/DEAH box helicase insig. 96 100
o Rhodanobacter sp. FW510-T8 OKGIIK_13010 hepA ATP-dependent helicase cofit 95 100
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS13245 DEAD/DEAH box helicase strong 84 100
  Rhodanobacter sp. FW510-T8 OKGIIK_16155 Helicase SNF2 insig. 48 85
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS09905 DEAD/DEAH box helicase insig. 47 85
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS02670 DEAD/DEAH box helicase insig. 47 85
  Pseudomonas stutzeri RCH2 Psest_1651 Superfamily II DNA/RNA helicases, SNF2 family insig. 48 73
  Pseudomonas sp. SVBP6 COO64_RS09450 DEAD/DEAH box helicase insig. 47 73
  Paraburkholderia graminis OAS925 ABIE53_006198 superfamily II DNA or RNA helicase insig. 42 89
  Pseudomonas sp. BP01 JOY50_RS25090 DEAD/DEAH box helicase insig. 46 77
o Pseudomonas sp. DMC3 GFF1282 hypothetical protein insig. 40 99
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_06540 Superfamily II DNA or RNA helicase, SNF2 family insig. 42 89
  Burkholderia phytofirmans PsJN BPHYT_RS24775 helicase insig. 43 89
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3913 COG0553: Superfamily II DNA/RNA helicases, SNF2 family insig. 44 82
  Pseudomonas aeruginosa PA14 IKLFDK_03460 helicase cofit 49 73
o Pseudomonas putida KT2440 PP_2146 helicase SNF2/RAD54 family insig. 46 77
  Pseudomonas fluorescens FW300-N2C3 AO356_02280 helicase insig. 46 73
o Shewanella sp. ANA-3 Shewana3_2795 SNF2-related protein (RefSeq) strong 39 88
  Pseudomonas syringae pv. syringae B728a Psyr_1894 SNF2-related:Helicase, C-terminal:SWIM Zn-finger insig. 48 63
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1894 SNF2-related:Helicase, C-terminal:SWIM Zn-finger insig. 48 63
  Pseudomonas fluorescens FW300-N2E3 AO353_00445 helicase insig. 46 73
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4029 COG0553: Superfamily II DNA/RNA helicases, SNF2 family insig. 46 73
  Pseudomonas simiae WCS417 PS417_07625 helicase insig. 44 73
  Pseudomonas fluorescens SBW25 PFLU_RS07700 DEAD/DEAH box helicase cofit 43 77
  Pseudomonas fluorescens SBW25-INTG PFLU_RS07700 DEAD/DEAH box helicase sig. 43 77
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2280 COG0553: Superfamily II DNA/RNA helicases, SNF2 family strong 46 73
  Pseudomonas lactucae CFBP13502 GEMAOFIL_01657 hypothetical protein cofit 45 71
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3914 COG0553: Superfamily II DNA/RNA helicases, SNF2 family insig. 45 73
  Pseudomonas sp. DMC3 GFF1283 hypothetical protein cofit 45 73
  Rhodanobacter denitrificans MT42 LRK55_RS17115 DEAD/DEAH box helicase insig. 41 87
  Shewanella oneidensis MR-1 SO1651 Snf2 family protein (NCBI ptt file) sig. 39 88
  Pseudomonas sp. RS175 PFR28_01121 hypothetical protein insig. 45 73
  Azospirillum sp. SherDot2 MPMX19_01520 hypothetical protein insig. 48 63
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_14040 helicase insig. 42 77
  Erwinia tracheiphila SCR3 LU632_RS20970 DEAD/DEAH box helicase cofit 42 77
  Acidovorax sp. GW101-3H11 Ac3H11_2184 FIG00348557: hypothetical protein insig. 44 70
  Rhodospirillum rubrum S1H Rru_A0208 SNF2 helicase-related protein (NCBI) insig. 43 79
  Erwinia amylovora T8 OLJFJH_07310 helicase insig. 43 75
  Acidovorax sp. GW101-3H11 Ac3H11_2870 COG0553: Superfamily II DNA/RNA helicases, SNF2 family insig. 43 75
  Shewanella loihica PV-4 Shew_1892 SNF2-related protein (RefSeq) sig. 40 60
  Herbaspirillum seropedicae SmR1 HSERO_RS22930 helicase insig. 52 47
  Desulfovibrio vulgaris Hildenborough JW710 DVU2085 Snf2 family protein (TIGR) strong 40 59
  Desulfovibrio vulgaris Miyazaki F DvMF_0789 Non-specific serine/threonine protein kinase (RefSeq) no data 41 60
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_08215 DNA helicase insig. 44 50
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_17010 helicase SNF2 strong 43 48
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS10950 DEAD/DEAH box helicase sig. 56 34
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS02650 DNA helicase insig. 43 45
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1542 Superfamily II DNA/RNA helicases, SNF2 family strong 43 48
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS22985 helicase SNF2 strong 39 52
  Fusobacterium nucleatum SB010 HUW76_05800 DEAD/DEAH box helicase cofit 41 47
  Cupriavidus basilensis FW507-4G11 RR42_RS03175 DNA helicase strong 43 52
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS20105 DEAD/DEAH box helicase strong 40 46
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0444 Superfamily II DNA/RNA helicases, SNF2 family insig. 44 44
  Bifidobacterium breve UCC2003 BBR_RS17985 helicase strong 43 44
  Fusobacterium nucleatum SB010 HUW76_08675 DEAD/DEAH box helicase family protein strong 38 47
  Synechococcus elongatus PCC 7942 Synpcc7942_0874 DEAD/DEAH box helicase-like strong 44 47
  Bacteroides ovatus ATCC 8483 BACOVA_01961 SNF2 family N-terminal domain protein insig. 42 45
  Mycobacterium tuberculosis H37Rv Rv2101 Probable helicase HelZ insig. 43 45
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS17645 SNF2-related protein insig. 36 65
  Cupriavidus basilensis FW507-4G11 RR42_RS08740 helicase insig. 43 45
  Synechocystis sp000284455 PCC 6803 SGL_RS17180 DEAD/DEAH box helicase strong 42 47
  Bacteroides thetaiotaomicron VPI-5482 BT3353 Snf2 family helicase (NCBI ptt file) sig. 41 40
  Variovorax sp. OAS795 ABID97_RS21795 DEAD/DEAH box helicase cofit 35 51
  Cupriavidus basilensis FW507-4G11 RR42_RS36870 helicase SNF2 insig. 34 45
  Escherichia coli ECRC100 OKFHMN_05760 zorD Zorya protein ZorD cofit 33 44
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3463.1 COG0553: Superfamily II DNA/RNA helicases, SNF2 family insig. 32 47
  Acinetobacter radioresistens SK82 MPMX26_02863 RNA polymerase-associated protein RapA insig. 32 44
  Rhizobium sp. OAE497 ABIE40_RS12300 DEAD/DEAH box helicase insig. 32 46
  Vibrio cholerae E7946 ATCC 55056 CSW01_08835 helicase insig. 30 41
  Shewanella sp. ANA-3 Shewana3_3788 SNF2-related protein (RefSeq) cofit 26 44
  Pseudomonas aeruginosa PA14 IKLFDK_01235 ATP-dependent helicase insig. 30 42
  Bacteroides stercoris CC31F HMPREF1181_RS07090 DEAD/DEAH box helicase insig. 27 46
  Pseudomonas syringae pv. syringae B728a Psyr_1520 SNF2-related:Helicase, C-terminal insig. 28 42
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1520 SNF2-related:Helicase, C-terminal insig. 28 42
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS02520 DEAD/DEAH box helicase insig. 26 37
  Sphingobium sp. HT1-2 GFF2203 SWI/SNF family helicase cofit 25 40
  Kangiella aquimarina DSM 16071 B158DRAFT_1267 Superfamily II DNA/RNA helicases, SNF2 family insig. 26 28
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.688.1 helicase (Snf2/Rad54 family) no data 26 27
  Bacteroides thetaiotaomicron VPI-5482 BT3353 Snf2 family helicase (NCBI ptt file) sig. 60 5
  Cupriavidus basilensis FW507-4G11 RR42_RS06790 hypothetical protein insig. 23 39
  Paraburkholderia sabiae LMG 24235 QEN71_RS43920 SNF2-related protein insig. 23 42
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_00955 Helicase ATP-binding domain-containing protein cofit 22 42
  Erwinia tracheiphila SCR3 LU632_RS15175 DEAD/DEAH box helicase no data 23 42
  Erwinia tracheiphila SCR3 LU632_RS17505 DEAD/DEAH box helicase no data 23 42
  Magnetospirillum magneticum AMB-1 AMB_RS04645 ATP-dependent helicase cofit 33 17
  Pseudomonas sp. S08-1 OH686_23015 hypothetical protein insig. 31 14
  Erwinia tracheiphila SCR3 LU632_RS22085 DEAD/DEAH box helicase insig. 22 41
  Magnetospirillum magneticum AMB-1 AMB_RS04645 ATP-dependent helicase cofit 35 9
  Escherichia coli ECRC62 BNILDI_09545 hepA helicase cofit 22 42
  Escherichia coli ECRC99 KEDOAH_16475 hepA helicase no data 22 42
  Escherichia coli ECRC100 OKFHMN_11670 hepA helicase cofit 22 42
  Escherichia coli ECRC101 MCAODC_02185 hepA helicase strong 22 42
  Escherichia coli ECRC102 NIAGMN_09520 hepA helicase cofit 22 42
  Escherichia coli ECRC98 JDDGAC_15270 hepA helicase cofit 22 42
  Paraburkholderia sabiae LMG 24235 QEN71_RS00695 DEAD/DEAH box helicase cofit 26 38
  Rhodopseudomonas palustris CGA009 TX73_011450 helicase-related protein insig. 29 11
  Sinorhizobium meliloti 1021 SMc02152 helicase insig. 29 13
  Azospirillum brasilense Sp245 AZOBR_RS30290 RNA helicase insig. 29 15