Homologs of HSERO_RS09485 from Herbaspirillum seropedicae SmR1

DNA mismatch repair protein MutS

Top 100 hits from BLASTp (E < 0.01)

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Orth	Species	Gene	Name	Description	Fitness	%Id	Cov
	Herbaspirillum seropedicae SmR1	HSERO_RS09485		DNA mismatch repair protein MutS	insig.	100	100
	Paraburkholderia sabiae LMG 24235	QEN71_RS03370		Smr/MutS family protein	insig.	55	84
o	Variovorax sp. SCN45	GFF5699		Smr domain protein	insig.	54	97
o	Variovorax sp. OAS795	ABID97_RS07695		Smr/MutS family protein	insig.	55	97
	Paraburkholderia bryophila 376MFSha3.1	H281DRAFT_00172		DNA-nicking endonuclease, Smr domain	insig.	60	78
	Paraburkholderia graminis OAS925	ABIE53_001284		DNA-nicking Smr family endonuclease	insig.	60	78
	Acidovorax sp. GW101-3H11	Ac3H11_1775		ortholog of Bordetella pertussis (BX470248) BP2475	no data	56	77
o	Ralstonia solanacearum PSI07	RPSI07_RS13180		DNA mismatch repair protein MutS	insig.	58	77
	Burkholderia phytofirmans PsJN	BPHYT_RS05065		DNA mismatch repair protein MutS	insig.	59	79
o	Ralstonia solanacearum IBSBF1503	RALBFv3_RS04170		DNA mismatch repair protein MutS	no data	57	77
o	Ralstonia solanacearum UW163	UW163_RS09500		DNA mismatch repair protein MutS	no data	57	77
o	Ralstonia sp. UNC404CL21Col	ABZR87_RS16070		Smr/MutS family protein	insig.	52	92
o	Ralstonia solanacearum GMI1000	RS_RS11760		DNA mismatch repair protein MutS	insig.	50	96
o	Cupriavidus basilensis FW507-4G11	RR42_RS04310		DNA mismatch repair protein MutS	insig.	54	92
o	Hydrogenophaga sp. GW460-11-11-14-LB1	GFF1175		ortholog of Bordetella pertussis (BX470248) BP2475	no data	51	97
	Dechlorosoma suillum PS	Dsui_1688		hypothetical protein	insig.	45	80
	Castellaniella sp019104865 MT123	ABCV34_RS07240		Smr/MutS family protein	no data	52	48
	Pseudomonas syringae pv. syringae B728a	Psyr_1847		Smr protein/MutS2 C-terminal	no data	34	80
	Pseudomonas syringae pv. syringae B728a ΔmexB	Psyr_1847		Smr protein/MutS2 C-terminal	insig.	34	80
o	Shewanella sp. ANA-3	Shewana3_2157		Smr protein/MutS2 (RefSeq)	insig.	35	80
	Pseudomonas fluorescens SBW25	PFLU_RS21310		Smr/MutS family protein	insig.	34	80
	Pseudomonas fluorescens SBW25-INTG	PFLU_RS21310		Smr/MutS family protein	sig.	34	80
	Dyella japonica UNC79MFTsu3.2	ABZR86_RS06600		Smr/MutS family protein	insig.	41	79
	Pseudomonas sp. RS175	PFR28_03132		putative DNA endonuclease SmrA	insig.	34	80
o	Shewanella oneidensis MR-1	SO2495		Smr domain protein (NCBI ptt file)	insig.	36	80
	Pseudomonas simiae WCS417	PS417_19345		DNA mismatch repair protein MutS	no data	34	80
	Pseudomonas fluorescens FW300-N2C3	AO356_19510		DNA mismatch repair protein MutS	no data	34	80
	Pseudomonas fluorescens FW300-N2E2	Pf6N2E2_5816		Smr domain protein	insig.	34	80
	Pseudomonas fluorescens GW456-L13	PfGW456L13_4172		Smr domain protein	insig.	33	80
	Pseudomonas fluorescens FW300-N2E3	AO353_02280		DNA mismatch repair protein MutS	insig.	32	80
	Rhodanobacter sp. FW510-T8	OKGIIK_08120	smrA	SMR domain protein	insig.	39	80
	Pseudomonas fluorescens FW300-N1B4	Pf1N1B4_3774		Smr domain protein	no data	39	60
	Pseudomonas sp. S08-1	OH686_00650		Smr domain protein	insig.	39	59
	Pseudomonas putida KT2440	PP_1824		Smr domain protein	strong	33	80
	Rhodanobacter denitrificans MT42	LRK55_RS16370		Smr/MutS family protein	cofit	39	62
	Rhodanobacter denitrificans FW104-10B01	LRK54_RS16645		Smr/MutS family protein	insig.	39	62
	Pseudomonas stutzeri RCH2	Psest_1993		Uncharacterized protein conserved in bacteria	insig.	38	59
	Pectobacterium carotovorum WPP14	HER17_RS06925		endonuclease SmrB	cofit	36	78
	Escherichia coli ECRC101	OKFHMN_22605	smrB	endonuclease SmrB	insig.	38	65
	Escherichia coli ECRC101	MCAODC_13645	smrB	endonuclease SmrB	insig.	38	65
	Escherichia coli ECRC102	NIAGMN_20380	smrB	endonuclease SmrB	insig.	38	65
	Escherichia coli ECRC98	JDDGAC_26565	smrB	endonuclease SmrB	no data	38	65
	Escherichia coli ECRC99	KEDOAH_05590	smrB	endonuclease SmrB	no data	38	65
o	Dickeya dianthicola ME23	DZA65_RS12625		DNA endonuclease SmrA	insig.	32	81
	Dickeya dadantii 3937	DDA3937_RS14590		endonuclease SmrB	insig.	35	78
	Lysobacter sp. OAE881	ABIE51_RS06480		Smr/MutS family protein	insig.	34	77
	Dickeya dianthicola 67-19	HGI48_RS14540		endonuclease SmrB	insig.	35	78
	Escherichia fergusonii Becca	EFB2_01527		Endonuclease MutS2	insig.	37	65
	Escherichia coli ECRC62	BNILDI_13160	smrB	endonuclease SmrB	insig.	37	65
	Escherichia coli HS(pFamp)R (ATCC 700891)	OHPLBJKB_01374		Endonuclease MutS2	insig.	37	65
	Escherichia coli Nissle 1917	ECOLIN_RS13500		endonuclease SmrB	no data	37	65
	Escherichia coli BW25113	b2331	yfcN	hypothetical protein (NCBI)	sig.	37	65
	Escherichia coli BL21	ECD_02256		putative DNA endonuclease	insig.	37	65
	Escherichia coli ECOR27	NOLOHH_14240	smrB	endonuclease SmrB	cofit	37	65
	Escherichia coli ECOR38	HEPCGN_21810	smrB	endonuclease SmrB	cofit	37	65
	Klebsiella michiganensis M5al	BWI76_RS20445		endonuclease SmrB	no data	36	65
	Dickeya dianthicola ME23	DZA65_RS15475		endonuclease SmrB	insig.	35	78
o	Pantoea sp. MT58	IAI47_09585		DNA endonuclease SmrA	insig.	29	81
	Erwinia tracheiphila SCR3	LU632_RS07765	smrB	endonuclease SmrB	insig.	37	78
	Desulfovibrio vulgaris Miyazaki F	DvMF_3162		Smr protein/MutS2 (RefSeq)	insig.	36	81
	Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868	GFF1952		FIG001674: hypothetical protein	insig.	36	65
	Xanthomonas campestris pv. campestris strain 8004	Xcc-8004.3133.1		ortholog of Bordetella pertussis (BX470248) BP2475	sig.	37	65
	Enterobacter sp. TBS_079	MPMX20_03266		Endonuclease MutS2	insig.	37	65
	Enterobacter asburiae PDN3	EX28DRAFT_0273		Uncharacterized protein conserved in bacteria	cofit	37	65
o	Shewanella loihica PV-4	Shew_2054		Smr protein/MutS2 (RefSeq)	insig.	35	80
	Marinobacter adhaerens HP15	HP15_1255		protein containing Smr protein/MutS2 C-terminal domain	sig.	34	67
	Enterobacter asburiae PDN3	EX28DRAFT_1533		Uncharacterized protein conserved in bacteria	insig.	38	60
	Pantoea sp. MT58	IAI47_06140		endonuclease SmrB	insig.	38	65
o	Serratia liquefaciens MT49	IAI46_18035		endonuclease SmrB	insig.	31	80
	Dickeya dadantii 3937	DDA3937_RS12085		DNA endonuclease SmrA	insig.	31	81
	Desulfovibrio vulgaris Hildenborough JW710	DVU2331		Smr family protein (TIGR)	insig.	42	48
o	Rahnella sp. WP5	EX31_RS07180		DNA endonuclease SmrA	insig.	31	82
o	Alteromonas macleodii MIT1002	MIT1002_01227		recombination and DNA strand exchange inhibitor protein	insig.	31	95
	Rahnella sp. WP5	EX31_RS19695		endonuclease SmrB	insig.	33	80
	Alteromonas macleodii MIT1002	MIT1002_01029		putative DNA endonuclease SmrA	insig.	31	79
o	Vibrio cholerae E7946 ATCC 55056	CSW01_11330		DNA endonuclease SmrA	insig.	33	80
	Kangiella aquimarina DSM 16071	B158DRAFT_1926		Uncharacterized protein conserved in bacteria	insig.	38	58
	Serratia liquefaciens MT49	IAI46_19830		DNA endonuclease SmrA	insig.	35	55
o	Acinetobacter radioresistens SK82	MPMX26_00982		Endonuclease MutS2	cofit	29	85
	Klebsiella michiganensis M5al	BWI76_RS16155		hypothetical protein	no data	39	51
	Enterobacter sp. TBS_079	MPMX20_02041		putative DNA endonuclease SmrA	insig.	39	51
	Escherichia coli ECOR27	NOLOHH_19905	smrA	DNA endonuclease SmrA	no data	30	81
	Escherichia coli ECRC101	OKFHMN_02190	smrA	DNA endonuclease SmrA	no data	30	81
	Escherichia coli ECRC101	MCAODC_16065	smrA	DNA endonuclease SmrA	insig.	30	81
	Escherichia coli ECRC102	NIAGMN_26360	smrA	DNA endonuclease SmrA	insig.	30	81
	Escherichia coli ECRC62	BNILDI_18055	smrA	DNA endonuclease SmrA	insig.	30	81
	Escherichia coli ECRC98	JDDGAC_04750	smrA	DNA endonuclease SmrA	no data	30	81
	Escherichia coli ECRC99	KEDOAH_26565	smrA	DNA endonuclease SmrA	no data	30	81
	Escherichia fergusonii Becca	EFB2_02588		putative DNA endonuclease SmrA	insig.	30	81
	Escherichia coli Nissle 1917	ECOLIN_RS08040		DNA endonuclease SmrA	insig.	30	81
	Escherichia coli BL21	ECD_01317		DNA endonuclease	insig.	30	81
	Escherichia coli BW25113	b1340	ydaL	hypothetical protein (NCBI)	no data	30	81
	Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868	GFF2654		FIG00638524: hypothetical protein	insig.	33	58
	Vibrio cholerae E7946 ATCC 55056	CSW01_10575		endonuclease SmrB	insig.	33	80
	Escherichia coli ECOR38	HEPCGN_25970	smrA	DNA endonuclease SmrA	cofit	30	81
o	Shewanella amazonensis SB2B	Sama_1818		Smr domain-containing protein (RefSeq)	insig.	32	81
	Escherichia coli HS(pFamp)R (ATCC 700891)	OHPLBJKB_02342		putative DNA endonuclease SmrA	insig.	30	81
	Shewanella amazonensis SB2B	Sama_2161		hypothetical protein (RefSeq)	sig.	41	44
	Shewanella sp. ANA-3	Shewana3_1467		hypothetical protein (RefSeq)	insig.	34	55
	Shewanella oneidensis MR-1	SO3081		Smr domain protein (NCBI ptt file)	sig.	35	54