Homologs of HMPREF1078_RS17075 from Parabacteroides merdae CL09T00C40

ABC transporter permease
SEED: ABC-type transport system involved in resistance to organic solvents, permease component
KEGG: putative ABC transport system permease protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS17075 ABC transporter permease strong 100 100
o Bacteroides ovatus ATCC 8483 BACOVA_00331 hypothetical protein cofit 62 100
o Bacteroides stercoris CC31F HMPREF1181_RS07475 ABC transporter permease strong 61 100
o Phocaeicola dorei CL03T12C01 ABI39_RS02350 ABC transporter permease strong 61 100
o Bacteroides thetaiotaomicron VPI-5482 BT3838 conserved hypothetical protein (NCBI ptt file) no data 61 100
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS03105 ABC transporter permease strong 60 100
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS06620 ABC transporter permease cofit 43 98
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS16015 ABC transporter permease strong 45 96
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_08095 ABC transporter permease cofit 43 98
o Azospirillum sp. SherDot2 MPMX19_06141 Intermembrane phospholipid transport system permease protein MlaE insig. 31 98
o Rhodospirillum rubrum S1H Rru_A0408 Protein of unknown function DUF140 (NCBI) no data 31 97
o Azospirillum brasilense Sp245 AZOBR_RS08345 ABC transporter permease strong 30 98
o Caulobacter crescentus NA1000 CCNA_03809 organic solvent resistance transport system permease strong 32 88
o Caulobacter crescentus NA1000 Δfur CCNA_03809 organic solvent resistance transport system permease cofit 32 88
o Pseudomonas stutzeri RCH2 Psest_3306 conserved hypothetical integral membrane protein strong 35 88
o Magnetospirillum magneticum AMB-1 AMB_RS10570 ABC transporter permease no data 30 97
o Pseudomonas fluorescens FW300-N2E3 AO353_05145 ABC transporter permease strong 33 87
  Pseudomonas fluorescens GW456-L13 PfGW456L13_630 ABC-type transport system involved in resistance to organic solvents, permease component USSDB6A insig. 28 89
  Variovorax sp. OAS795 ABID97_RS04010 ABC transporter permease sig. 28 97
o Pseudomonas sp. RS175 PFR28_00180 Intermembrane phospholipid transport system permease protein MlaE strong 33 88
o Pseudomonas sp. S08-1 OH686_08505 Phospholipid ABC transporter permease protein MlaE cofit 33 87
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_4045 ABC-type transport system involved in resistance to organic solvents, permease component no data 32 86
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_04390 ABC transporter permease cofit 32 85
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS04925 ABC transporter permease no data 32 90
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4143 ABC-type transport system involved in resistance to organic solvents, permease component USSDB6A insig. 26 89
  Pseudomonas fluorescens GW456-L13 PfGW456L13_5007 Uncharacterized ABC transporter, permease component YrbE no data 32 86
o Shewanella amazonensis SB2B Sama_3080 hypothetical protein (RefSeq) strong 34 95
o Pseudomonas fluorescens FW300-N2C3 AO356_07000 ABC transporter permease strong 32 88
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3259 Uncharacterized ABC transporter, permease component YrbE no data 32 88
o Pseudomonas syringae pv. syringae B728a Psyr_4140 Protein of unknown function DUF140 sig. 31 88
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4140 Protein of unknown function DUF140 sig. 31 88
  Pseudomonas fluorescens FW300-N2E3 AO353_11015 ABC transporter permease insig. 26 89
o Marinobacter adhaerens HP15 HP15_2435 ABC-type transport system involved in resistance to organic solvents, permease component strong 33 94
o Pseudomonas fluorescens SBW25 PFLU_RS04435 lipid asymmetry maintenance ABC transporter permease subunit MlaE strong 32 86
o Pseudomonas fluorescens SBW25-INTG PFLU_RS04435 lipid asymmetry maintenance ABC transporter permease subunit MlaE strong 32 86
o Pseudomonas putida KT2440 PP_0959 phospholipid ABC transporter strong 32 88
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1073 Uncharacterized ABC transporter, permease component YrbE no data 32 86
o Pseudomonas simiae WCS417 PS417_04380 ABC transporter permease strong 32 86
  Ralstonia sp. UNC404CL21Col ABZR87_RS06515 ABC transporter permease insig. 29 94
  Pseudomonas sp. RS175 PFR28_04643 hypothetical protein sig. 26 89
  Pseudomonas fluorescens SBW25 PFLU_RS00485 ABC transporter permease insig. 25 89
  Pseudomonas fluorescens SBW25-INTG PFLU_RS00485 ABC transporter permease sig. 25 89
  Herbaspirillum seropedicae SmR1 HSERO_RS14470 ABC transporter permease insig. 25 92
  Marinobacter adhaerens HP15 HP15_1572 ABC transporter, permease protein insig. 27 94
  Pseudomonas fluorescens FW300-N2C3 AO356_11375 ABC transporter permease insig. 25 89
o Shewanella oneidensis MR-1 SO3953 conserved hypothetical protein TIGR00056 (NCBI ptt file) strong 33 95
  Pseudomonas simiae WCS417 PS417_00495 ABC transporter permease insig. 26 89
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS18860 ABC transporter permease insig. 26 94
o Alteromonas macleodii MIT1002 MIT1002_00835 putative phospholipid ABC transporter permease protein MlaE sig. 33 95
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS08600 ABC transporter permease strong 29 88
o Shewanella loihica PV-4 Shew_3303 hypothetical protein (RefSeq) strong 32 95
o Vibrio cholerae E7946 ATCC 55056 CSW01_12770 ABC transporter permease cofit 30 95
o Shewanella sp. ANA-3 Shewana3_0679 hypothetical protein (RefSeq) strong 33 95
o Synechococcus elongatus PCC 7942 Synpcc7942_0378 ycf63 Protein of unknown function DUF140 strong 27 87
o Desulfovibrio vulgaris Miyazaki F DvMF_0852 protein of unknown function DUF140 (RefSeq) strong 28 88
o Desulfovibrio vulgaris Hildenborough JW710 DVU1246 membrane protein, putative (TIGR) strong 29 88
  Ralstonia solanacearum PSI07 RPSI07_RS22610 ABC transporter permease insig. 29 94
o Erwinia tracheiphila SCR3 LU632_RS21240 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE strong 31 95
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS10710 ABC transporter permease insig. 29 94
  Ralstonia solanacearum UW163 UW163_RS02870 ABC transporter permease insig. 29 94
  Caulobacter crescentus NA1000 CCNA_02403 ABC transporter permease protein cofit 27 94
  Caulobacter crescentus NA1000 Δfur CCNA_02403 ABC transporter permease protein cofit 27 94
o Acinetobacter radioresistens SK82 MPMX26_02740 Intermembrane phospholipid transport system permease protein MlaE strong 32 95
  Magnetospirillum magneticum AMB-1 AMB_RS01680 ABC transporter permease insig. 28 88
  Pseudomonas stutzeri RCH2 Psest_4255 conserved hypothetical integral membrane protein insig. 28 89
o Pectobacterium carotovorum WPP14 HER17_RS20020 lipid asymmetry maintenance ABC transporter permease subunit MlaE cofit 30 95
o Enterobacter sp. TBS_079 MPMX20_04100 Intermembrane phospholipid transport system permease protein MlaE sig. 31 87
  Ralstonia solanacearum GMI1000 RS_RS01540 ABC transporter permease insig. 29 94
  Dechlorosoma suillum PS Dsui_2812 conserved hypothetical integral membrane protein cofit 29 83
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS20600 ABC transporter permease insig. 29 98
o Phaeobacter inhibens DSM 17395 PGA1_c10870 conserved hypothetical integral membrane protein strong 28 90
o Pantoea sp. MT58 IAI47_17140 lipid asymmetry maintenance ABC transporter permease subunit MlaE sig. 31 87
o Escherichia coli BL21 ECD_03059 ABC transporter maintaining OM lipid asymmetry, inner membrane permease protein cofit 31 87
o Escherichia fergusonii Becca EFB2_00629 Intermembrane phospholipid transport system permease protein MlaE cofit 31 87
o Escherichia coli ECOR27 NOLOHH_09780 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE strong 31 87
o Escherichia coli ECOR38 HEPCGN_16855 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE strong 31 87
o Escherichia coli ECRC101 OKFHMN_17980 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE sig. 31 87
o Escherichia coli ECRC101 MCAODC_08500 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE sig. 31 87
o Escherichia coli ECRC102 NIAGMN_15740 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE sig. 31 87
o Escherichia coli ECRC62 BNILDI_01755 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE insig. 31 87
o Escherichia coli ECRC98 JDDGAC_21605 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE no data 31 87
o Escherichia coli ECRC99 KEDOAH_10170 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE no data 31 87
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00506 putative phospholipid ABC transporter permease protein MlaE cofit 31 87
o Escherichia coli Nissle 1917 ECOLIN_RS18385 lipid asymmetry maintenance ABC transporter permease subunit MlaE strong 31 87
o Escherichia coli BW25113 b3194 yrbE predicted toluene transporter subunit: membrane component of ABC superfamily (NCBI) strong 31 87
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2938 Uncharacterized ABC transporter, permease component YrbE insig. 31 87
  Desulfovibrio vulgaris Miyazaki F DvMF_1505 protein of unknown function DUF140 (RefSeq) insig. 28 89
  Pseudomonas putida KT2440 PP_0142 putative ABC transporter, permease protein sig. 27 89
o Enterobacter asburiae PDN3 EX28DRAFT_3248 ABC transport permease subunit cofit 30 87
o Dickeya dianthicola 67-19 HGI48_RS01485 lipid asymmetry maintenance ABC transporter permease subunit MlaE insig. 30 94
o Dickeya dianthicola ME23 DZA65_RS01550 lipid asymmetry maintenance ABC transporter permease subunit MlaE cofit 30 94
o Serratia liquefaciens MT49 IAI46_22425 lipid asymmetry maintenance ABC transporter permease subunit MlaE insig. 30 91
o Dickeya dadantii 3937 DDA3937_RS01570 lipid asymmetry maintenance ABC transporter permease subunit MlaE strong 30 90
o Klebsiella michiganensis M5al BWI76_RS25225 ABC transporter permease strong 30 87
  Sphingomonas koreensis DSMZ 15582 Ga0059261_1871 ABC transport permease subunit strong 29 93
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1893 ABC-type transport system involved in resistance to organic solvents, permease component USSDB6A insig. 26 89
  Dechlorosoma suillum PS Dsui_1399 conserved hypothetical integral membrane protein strong 30 93
  Variovorax sp. SCN45 GFF5043 ABC transporter, permease protein (cluster 9, phospholipid) insig. 27 94
  Paraburkholderia sabiae LMG 24235 QEN71_RS01265 ABC transporter permease cofit 28 86
o Rahnella sp. WP5 EX31_RS12440 lipid asymmetry maintenance ABC transporter permease subunit MlaE cofit 30 88