Homologs of HMPREF1078_RS10090 from Parabacteroides merdae CL09T00C40

ABC transporter permease
SEED: ABC-type multidrug transport system, permease component
KEGG: antibiotic transport system permease protein

154 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS10090 ABC transporter permease strong 100 100
o Bacteroides ovatus ATCC 8483 BACOVA_01125 ABC-2 type transporter strong 58 99
o Bacteroides thetaiotaomicron VPI-5482 BT3902 conserved hypothetical protein (NCBI ptt file) strong 58 99
o Phocaeicola dorei CL03T12C01 ABI39_RS01380 ABC transporter permease insig. 54 99
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS02190 ABC transporter permease cofit 54 99
o Bacteroides stercoris CC31F HMPREF1181_RS06680 ABC transporter permease cofit 55 94
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS10210 ABC transporter permease insig. 32 94
  Bacteroides ovatus ATCC 8483 BACOVA_00760 ABC-2 type transporter insig. 34 84
  Bacteroides thetaiotaomicron VPI-5482 BT0957 conserved hypothetical protein (NCBI ptt file) sig. 34 84
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS06105 ABC transporter permease sig. 34 86
  Phocaeicola dorei CL03T12C01 ABI39_RS17920 ABC transporter permease insig. 34 86
  Bacteroides stercoris CC31F HMPREF1181_RS10530 ABC transporter permease insig. 33 91
  Azospirillum sp. SherDot2 MPMX19_04496 hypothetical protein insig. 33 90
  Variovorax sp. SCN45 GFF1139 Domain of unknown function / Efflux ABC transporter, permease protein cofit 33 84
  Shewanella oneidensis MR-1 SO4087 conserved hypothetical protein (NCBI ptt file) strong 29 91
  Shewanella sp. ANA-3 Shewana3_3637 hypothetical protein (RefSeq) strong 28 85
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4706 ABC-type multidrug transport system, permease component insig. 30 88
  Acidovorax sp. GW101-3H11 Ac3H11_500 ABC-type multidrug transport system, permease component sig. 30 83
  Shewanella loihica PV-4 Shew_0414 ABC-2 type transporter (RefSeq) strong 31 87
  Pectobacterium carotovorum WPP14 HER17_RS19375 ABC transporter permease insig. 26 92
  Vibrio cholerae E7946 ATCC 55056 CSW01_08090 ABC transporter permease insig. 28 93
  Shewanella amazonensis SB2B Sama_0480 hypothetical protein (RefSeq) strong 26 85
  Acinetobacter radioresistens SK82 MPMX26_02223 hypothetical protein no data 28 83
  Acinetobacter baumannii LAC-4 RR41_RS04505 ABC transporter permease insig. 27 83
  Pseudomonas aeruginosa MRSN321 PFGADD_01552 ABC-2 type transporter transmembrane domain-containing protein insig. 26 84
  Pseudomonas aeruginosa PA14 IKLFDK_17450 ABC transporter permease insig. 26 84
  Pseudomonas aeruginosa PUPa3 NPBIFN_01591 ABC-2 type transporter transmembrane domain-containing protein insig. 26 84
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3864 ABC-type multidrug transport system, permease component insig. 27 84
  Serratia liquefaciens MT49 IAI46_02000 ABC transporter permease insig. 24 81
  Sphingobium sp. HT1-2 GFF4737 Efflux ABC transporter, permease protein cofit 28 90
  Rahnella sp. WP5 EX31_RS08490 ABC transporter permease insig. 23 86
  Sphingobium sp. HT1-2 GFF5104 hypothetical protein cofit 24 78
  Shewanella amazonensis SB2B Sama_0479 hypothetical protein (RefSeq) strong 26 85
  Shewanella loihica PV-4 Shew_0413 ABC-2 type transporter (RefSeq) sig. 24 85
  Shewanella oneidensis MR-1 SO4088 conserved hypothetical protein (NCBI ptt file) strong 23 86
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4707 ABC-type multidrug transport system, permease component insig. 29 45
  Shewanella sp. ANA-3 Shewana3_3638 ABC-2 type transporter (RefSeq) strong 23 86
  Vibrio cholerae E7946 ATCC 55056 CSW01_08340 ABC transporter permease insig. 22 89
  Acidovorax sp. GW101-3H11 Ac3H11_501 ABC-type multidrug transport system, permease component strong 26 44
  Pseudomonas aeruginosa PA14 IKLFDK_17455 antibiotic ABC transporter permease insig. 26 75
  Pseudomonas aeruginosa PUPa3 NPBIFN_01590 ABC-2 type transporter transmembrane domain-containing protein insig. 26 75
  Pseudomonas aeruginosa MRSN321 PFGADD_01551 ABC-2 type transporter transmembrane domain-containing protein insig. 26 75
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3863 ABC-type multidrug transport system, permease component insig. 28 59
  Bacteroides ovatus ATCC 8483 BACOVA_01126 ABC-2 type transporter strong 26 68
  Dechlorosoma suillum PS Dsui_2340 ABC-type multidrug transport system, permease component cofit 22 74
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS02385 ABC transporter permease cofit 26 74
  Pectobacterium carotovorum WPP14 HER17_RS19370 ABC transporter permease insig. 22 76
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4471 ABC-type multidrug transport system, permease component strong 25 80
  Paraburkholderia graminis OAS925 ABIE53_005374 ABC-2 type transport system permease protein insig. 23 74
  Paraburkholderia sabiae LMG 24235 QEN71_RS17395 ABC transporter permease insig. 23 73
  Shewanella amazonensis SB2B Sama_3587 ABC transporter, permease protein, putative (RefSeq) insig. 23 81
  Rhodospirillum rubrum S1H Rru_A3129 ABC-2 transporter component (NCBI) insig. 24 90
  Bacteroides stercoris CC31F HMPREF1181_RS10530 ABC transporter permease insig. 25 71
  Cupriavidus basilensis FW507-4G11 RR42_RS02285 mannose-1-phosphate guanyltransferase insig. 22 74
  Bacteroides thetaiotaomicron VPI-5482 BT3903 conserved hypothetical protein (NCBI ptt file) strong 23 81
  Shewanella sp. ANA-3 Shewana3_2748 ABC-2 type transporter (RefSeq) insig. 23 79
  Pseudomonas sp. RS175 PFR28_04330 Inner membrane transport permease YhhJ insig. 25 80
  Serratia liquefaciens MT49 IAI46_01995 ABC transporter permease insig. 26 79
  Acinetobacter baumannii LAC-4 RR41_RS12560 ABC transporter permease insig. 21 90
  Pseudomonas fluorescens FW300-N2C3 AO356_12970 hypothetical protein insig. 24 80
  Variovorax sp. OAS795 ABID97_RS10410 ABC transporter permease insig. 23 92
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03450 ABC-2 type transport system permease protein insig. 24 74
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS02385 ABC transporter permease cofit 25 52
  Shewanella oneidensis MR-1 SO1707 ABC transporter, permease protein, putative (NCBI ptt file) insig. 23 79
  Pseudomonas sp. FW215-L2 GFF2642 Inner membrane transport permease YhhJ insig. 25 79
  Bacteroides stercoris CC31F HMPREF1181_RS16125 ABC transporter permease insig. 21 86
  Bacteroides ovatus ATCC 8483 BACOVA_03724 ABC-2 type transporter insig. 21 90
  Variovorax sp. SCN45 GFF1140 Domain of unknown function / Efflux ABC transporter, permease protein cofit 27 43
  Bacteroides stercoris CC31F HMPREF1181_RS06675 ABC transporter permease insig. 23 79
  Pseudomonas fluorescens SBW25 PFLU_RS28985 ABC transporter permease insig. 26 79
  Pseudomonas fluorescens SBW25-INTG PFLU_RS28985 ABC transporter permease sig. 26 79
  Pseudomonas simiae WCS417 PS417_27330 membrane protein insig. 24 77
  Bacteroides stercoris CC31F HMPREF1181_RS16130 ABC transporter permease insig. 23 90
  Shewanella loihica PV-4 Shew_0425 ABC-2 type transporter (RefSeq) insig. 24 86
  Phocaeicola dorei CL03T12C01 ABI39_RS01375 ABC transporter permease insig. 23 80
  Collimonas humicola GW821-FHT01A05 MPMX01_02415 putative multidrug ABC transporter permease YbhR insig. 22 79
  Bacteroides thetaiotaomicron VPI-5482 BT0956 conserved hypothetical protein, putative transmembrane protein (NCBI ptt file) strong 29 36
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS10095 ABC transporter permease strong 22 79
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS10215 ABC transporter permease insig. 25 54
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS09900 ABC transporter permease insig. 25 91
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS02185 ABC transporter permease cofit 23 80
  Azospirillum sp. SherDot2 MPMX19_04495 hypothetical protein insig. 25 55
  Pseudomonas protegens RBAN4 FABNJH_30140 ABC transporter permease insig. 25 83
  Marinobacter adhaerens HP15 HP15_1351 ABC-type multidrug transport system, permease component insig. 22 80
  Pseudomonas sp. SVBP6 COO64_RS01030 rbbA ribosome-associated ATPase/putative transporter RbbA insig. 22 84
  Pseudomonas sp. BP01 JOY50_RS22495 ABC transporter permease insig. 25 77
  Sphingobium sp. HT1-2 GFF4736 hypothetical protein insig. 25 39
  Pseudomonas fluorescens FW300-N2E3 AO353_08800 hypothetical protein insig. 24 77
  Lysobacter sp. OAE881 ABIE51_RS15475 ABC transporter permease insig. 22 91
  Vibrio cholerae E7946 ATCC 55056 CSW01_08085 ABC transporter permease insig. 25 40
  Bacteroides ovatus ATCC 8483 BACOVA_03723 ABC-2 type transporter insig. 22 89
  Pseudomonas putida KT2440 PP_5207 ribosome-associated ATPase insig. 21 84
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4472 ABC-type multidrug transport system, permease component strong 22 82
  Pseudomonas putida KT2440 PP_5208 putative translation related protein insig. 24 77
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS06100 ABC transporter permease insig. 25 51
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS13740 ABC transporter permease insig. 23 89
  Bacteroides ovatus ATCC 8483 BACOVA_00759 hypothetical protein insig. 26 50
  Sphingomonas koreensis DSMZ 15582 Ga0059261_4236 ABC-type multidrug transport system, permease component insig. 21 80
  Rahnella sp. WP5 EX31_RS08495 ABC transporter permease insig. 25 75
  Ralstonia solanacearum GMI1000 RS_RS00815 ABC transporter permease insig. 22 79
  Pseudomonas fluorescens FW300-N2E3 AO353_08795 multidrug ABC transporter ATP-binding protein insig. 22 80
  Phocaeicola dorei CL03T12C01 ABI39_RS17925 ABC transporter permease insig. 25 51
  Pseudomonas sp. BP01 JOY50_RS22490 rbbA ribosome-associated ATPase/putative transporter RbbA insig. 21 84
  Pseudomonas sp. RS175 PFR28_04329 Ribosome-associated ATPase insig. 24 79
  Acinetobacter baumannii LAC-4 RR41_RS12555 ABC transporter permease insig. 24 61
  Pseudomonas sp. SVBP6 COO64_RS01035 ABC transporter permease insig. 23 77
  Pseudomonas protegens RBAN4 FABNJH_14560 Transport permease protein insig. 22 93
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS10200 ABC transporter permease insig. 21 79
  Ralstonia solanacearum UW163 UW163_RS03380 ABC transporter permease insig. 21 79
  Variovorax sp. OAS795 ABID97_RS10415 ABC transporter permease insig. 19 81
  Pseudomonas sp. FW215-L2 GFF2641 Ribosome-associated ATPase insig. 22 88
  Pseudomonas protegens RBAN4 FABNJH_30135 rbbA ribosome-associated ATPase/putative transporter RbbA insig. 22 80
  Dickeya dianthicola ME23 DZA65_RS09055 ABC transporter permease insig. 22 70
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_07745 ABC transporter permease insig. 20 79
  Desulfovibrio vulgaris Hildenborough JW710 DVU0127 membrane protein, putative (TIGR) sig. 23 77
  Dickeya dadantii 3937 DDA3937_RS08625 ABC transporter permease insig. 22 70
  Ralstonia solanacearum PSI07 RPSI07_RS23145 ABC transporter permease insig. 21 79
  Erwinia tracheiphila SCR3 LU632_RS22030 ABC transporter permease insig. 20 79
  Azospirillum brasilense Sp245 AZOBR_RS05700 mannose-1-phosphate guanyltransferase insig. 25 70
  Klebsiella pneumoniae MKP103 KDGMDA_08060 mannose-1-phosphate guanyltransferase insig. 22 67
  Klebsiella pneumoniae MRSN742743 GJGHJB_00128 Transport permease protein insig. 22 67
  Pseudomonas fluorescens SBW25 PFLU_RS28980 ribosome-associated ATPase/putative transporter RbbA insig. 21 84
  Pseudomonas fluorescens SBW25-INTG PFLU_RS28980 ribosome-associated ATPase/putative transporter RbbA insig. 21 84
  Rhodanobacter denitrificans MT42 LRK55_RS13905 ABC transporter permease cofit 21 79
  Sphingobium sp. HT1-2 GFF5232 Inner membrane transport permease YhhJ insig. 23 93
  Pseudomonas simiae WCS417 PS417_27325 multidrug ABC transporter ATP-binding protein insig. 22 84
  Dickeya dianthicola 67-19 HGI48_RS08765 ABC transporter permease insig. 22 70
  Pectobacterium carotovorum WPP14 HER17_RS13375 ABC transporter permease insig. 21 70
  Rhodanobacter sp. FW510-T8 OKGIIK_02985 ABC transporter insig. 25 89
  Acinetobacter baumannii LAC-4 RR41_RS04510 ABC transporter permease insig. 23 54
  Acinetobacter radioresistens SK82 MPMX26_02222 hypothetical protein no data 20 56
  Pseudomonas sp. S08-1 OH686_05810 Domain of unknown function / Efflux ABC transporter, permease protein insig. 20 79
  Pseudomonas fluorescens FW300-N2C3 AO356_12975 multidrug ABC transporter ATP-binding protein insig. 24 80
  Castellaniella sp019104865 MT123 ABCV34_RS01300 ABC transporter permease insig. 20 79
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS14185 ABC transporter permease sig. 20 79
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS03845 ABC transporter permease sig. 20 87
  Azospirillum sp. SherDot2 MPMX19_01922 putative multidrug ABC transporter permease YbhS insig. 20 85
  Serratia liquefaciens MT49 IAI46_06595 ABC transporter permease insig. 20 78
  Enterobacter asburiae PDN3 EX28DRAFT_2199 ABC-type multidrug transport system, permease component insig. 20 79
  Dechlorosoma suillum PS Dsui_0269 ABC-type multidrug transport system, permease component insig. 22 94
  Pseudomonas protegens RBAN4 FABNJH_14555 Membrane protein insig. 23 78
  Phocaeicola dorei CL03T12C01 ABI39_RS17380 ABC transporter permease insig. 20 87
  Enterobacter sp. TBS_079 MPMX20_01420 putative multidrug ABC transporter permease YbhR insig. 21 81
  Ralstonia sp. UNC404CL21Col ABZR87_RS05685 ABC transporter permease insig. 21 73
  Sphingobium sp. HT1-2 GFF5105 hypothetical protein cofit 22 58
  Escherichia coli ECOR38 HEPCGN_01725 ybhR putative multidrug ABC transporter permease YbhR insig. 19 79
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS14425 ABC transporter permease insig. 21 79
  Xanthobacter sp. DMC5 GFF4621 putative multidrug ABC transporter permease YbhS insig. 21 91
  Rhodospirillum rubrum S1H Rru_A1790 ABC-2 transporter component (NCBI) insig. 20 73
  Xanthobacter sp. DMC5 GFF2218 Inner membrane transport permease YhhJ insig. 23 91
  Rhodopseudomonas palustris CGA009 TX73_003535 ABC transporter permease insig. 22 94
  Klebsiella pneumoniae MKP103 KDGMDA_17130 ABC-2 family transporter protein insig. 20 79
  Klebsiella pneumoniae MRSN742743 GJGHJB_03430 yadH Transport permease protein insig. 20 79
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF527 FIG01045128: hypothetical protein insig. 25 92