Homologs of GFF5688 from Variovorax sp. SCN45

Transcriptional regulator, LysR family

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Variovorax sp. SCN45 GFF5688 Transcriptional regulator, LysR family insig. 100 100
  Desulfovibrio vulgaris Hildenborough JW710 DVU3313 transcriptional regulator, LysR family (TIGR) insig. 42 93
  Cupriavidus basilensis FW507-4G11 RR42_RS16205 LysR family transcriptional regulator insig. 39 93
o Serratia liquefaciens MT49 IAI46_07130 LysR family transcriptional regulator insig. 40 93
o Herbaspirillum seropedicae SmR1 HSERO_RS19020 LysR family transcriptional regulator insig. 35 93
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5758 Transcriptional regulators, LysR family insig. 38 93
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1784 Aromatic hydrocarbon utilization transcriptional regulator CatR (LysR family) insig. 38 93
  Ralstonia sp. UNC404CL21Col ABZR87_RS12870 LysR family transcriptional regulator insig. 38 94
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1212.1 transcriptional regulator insig. 36 92
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS12040 LysR family transcriptional regulator insig. 38 91
  Herbaspirillum seropedicae SmR1 HSERO_RS05535 LysR family transcriptional regulator sig. 41 95
  Ralstonia sp. UNC404CL21Col ABZR87_RS00130 LysR substrate-binding domain-containing protein insig. 39 93
  Cupriavidus basilensis FW507-4G11 RR42_RS21255 LysR family transcriptional regulator strong 39 91
o Pantoea sp. MT58 IAI47_21735 LysR family transcriptional regulator insig. 37 94
  Paraburkholderia sabiae LMG 24235 QEN71_RS12500 LysR family transcriptional regulator insig. 35 93
  Cupriavidus basilensis FW507-4G11 RR42_RS28030 hypothetical protein insig. 42 85
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS04530 LysR family transcriptional regulator insig. 39 93
  Ralstonia solanacearum UW163 UW163_RS09140 LysR family transcriptional regulator insig. 39 93
  Pseudomonas stutzeri RCH2 Psest_3707 Transcriptional regulator insig. 37 94
  Variovorax sp. SCN45 GFF3566 Transcriptional regulator, LysR family insig. 38 93
  Ralstonia solanacearum GMI1000 RS_RS12100 LysR family transcriptional regulator insig. 39 93
  Paraburkholderia graminis OAS925 ABIE53_001240 DNA-binding transcriptional LysR family regulator insig. 36 93
  Burkholderia phytofirmans PsJN BPHYT_RS07095 LysR family transcriptional regulator insig. 35 100
  Variovorax sp. OAS795 ABID97_RS17495 LysR family transcriptional regulator no data 39 94
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03683 transcriptional regulator, LysR family insig. 36 93
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS17920 LysR family transcriptional regulator no data 37 93
  Ralstonia solanacearum UW163 UW163_RS21220 LysR family transcriptional regulator no data 37 93
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00128 transcriptional regulator, LysR family insig. 37 93
o Ralstonia solanacearum PSI07 RPSI07_RS05680 LysR family transcriptional regulator cofit 36 99
  Paraburkholderia sabiae LMG 24235 QEN71_RS25180 LysR family transcriptional regulator insig. 37 93
  Burkholderia phytofirmans PsJN BPHYT_RS04820 LysR family transcriptional regulator strong 36 93
  Pseudomonas fluorescens FW300-N2C3 AO356_25375 LysR family transcriptional regulator no data 36 93
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_5066 Transcriptional regulator, LysR family no data 37 93
  Cupriavidus basilensis FW507-4G11 RR42_RS27195 LysR family transcriptional regulator insig. 38 94
  Cupriavidus basilensis FW507-4G11 RR42_RS23410 hypothetical protein insig. 34 95
  Rhodanobacter denitrificans MT42 LRK55_RS17870 LysR family transcriptional regulator strong 37 93
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS18015 LysR family transcriptional regulator strong 37 93
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS11345 LysR family transcriptional regulator insig. 37 95
  Ralstonia solanacearum GMI1000 RS_RS23100 LysR family transcriptional regulator insig. 36 98
  Variovorax sp. SCN45 GFF286 Transcriptional regulator, LysR family insig. 36 94
  Rhodanobacter sp. FW510-T8 OKGIIK_07285 lysR LysR family transcriptional regulator strong 37 96
  Pseudomonas aeruginosa MRSN321 DY961_RS10965 LysR family transcriptional regulator insig. 36 94
  Pseudomonas aeruginosa PA14 IKLFDK_28390 LysR family transcriptional regulator sig. 36 94
  Pseudomonas aeruginosa PUPa3 DQ20_RS51110 LysR family transcriptional regulator insig. 36 94
  Pseudomonas aeruginosa PA14 IKLFDK_08880 LysR family transcriptional regulator insig. 41 86
  Paraburkholderia graminis OAS925 ABIE53_004575 DNA-binding transcriptional LysR family regulator sig. 36 93
  Serratia liquefaciens MT49 IAI46_11680 LysR family transcriptional regulator insig. 35 94
  Pseudomonas aeruginosa MRSN321 DY961_RS20860 LysR family transcriptional regulator insig. 41 86
  Escherichia coli ECOR27 NOLOHH_18240 ynfL Uncharacterized HTH-type transcriptional regulator YnfL insig. 36 91
  Escherichia coli ECOR38 HEPCGN_06110 ynfL Uncharacterized HTH-type transcriptional regulator YnfL insig. 36 91
  Escherichia coli ECRC100 OKFHMN_27735 ynfL Uncharacterized HTH-type transcriptional regulator YnfL insig. 36 91
  Escherichia coli ECRC101 MCAODC_17675 ynfL Uncharacterized HTH-type transcriptional regulator YnfL insig. 36 91
  Escherichia coli ECRC102 NIAGMN_00340 ynfL Uncharacterized HTH-type transcriptional regulator YnfL insig. 36 91
  Escherichia coli ECRC62 BNILDI_17030 ynfL Uncharacterized HTH-type transcriptional regulator YnfL cofit 36 91
  Escherichia coli ECRC98 JDDGAC_02325 ynfL Uncharacterized HTH-type transcriptional regulator YnfL insig. 36 91
  Escherichia coli ECRC99 KEDOAH_00370 ynfL Uncharacterized HTH-type transcriptional regulator YnfL no data 36 91
  Pseudomonas lactucae CFBP13502 GEMAOFIL_00636 HTH-type transcriptional regulator BenM cofit 36 94
  Dickeya dianthicola ME23 DZA65_RS11140 LysR family transcriptional regulator insig. 35 90
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS01430 LysR family transcriptional regulator cofit 34 93
  Erwinia amylovora T8 OLJFJH_05375 transcriptional regulator insig. 33 94
  Dickeya dadantii 3937 DDA3937_RS10670 LysR family transcriptional regulator insig. 35 90
  Variovorax sp. SCN45 GFF470 Transcriptional regulator, LysR family insig. 39 98
  Pseudomonas sp. DMC3 GFF3108 HTH-type transcriptional regulator BenM cofit 37 94
  Escherichia fergusonii Becca EFB2_02397 Hca operon transcriptional activator HcaR insig. 36 91
  Escherichia coli Nissle 1917 ECOLIN_RS08910 LysR family transcriptional regulator no data 36 91
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4112 Transcriptional regulator insig. 38 91
  Dickeya dianthicola 67-19 HGI48_RS10670 LysR family transcriptional regulator insig. 35 90
  Cupriavidus basilensis FW507-4G11 RR42_RS12375 LysR family transcriptional regulator sig. 42 84
  Pseudomonas sp. RS175 PFR28_05019 HTH-type transcriptional regulator BenM insig. 37 94
  Escherichia coli BL21 ECD_01564 LysR family putative transcriptional regulator no data 36 91
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02131 Hca operon transcriptional activator HcaR insig. 36 91
  Escherichia coli BW25113 b1595 ynfL predicted DNA-binding transcriptional regulator (NCBI) sig. 36 91
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1530 LysR family transcriptional regulator YnfL insig. 36 94
  Pectobacterium carotovorum WPP14 HER17_RS10740 LysR family transcriptional regulator insig. 34 94
  Burkholderia phytofirmans PsJN BPHYT_RS35265 LysR family transcriptional regulator insig. 36 93
  Acidovorax sp. GW101-3H11 Ac3H11_1988 transcriptional regulator, LysR family insig. 40 90
  Pseudomonas aeruginosa PUPa3 DQ20_RS54940 LysR family transcriptional regulator insig. 40 86
  Klebsiella pneumoniae MKP103 KDGMDA_21225 LysR family transcriptional regulator insig. 36 90
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS06410 LysR family transcriptional regulator insig. 36 94
  Pseudomonas aeruginosa MRSN321 DY961_RS11960 LysR family transcriptional regulator insig. 38 95
  Pseudomonas aeruginosa PUPa3 DQ20_RS50155 LysR family transcriptional regulator sig. 38 95
  Ralstonia sp. UNC404CL21Col ABZR87_RS17450 LysR family transcriptional regulator insig. 37 94
  Paraburkholderia sabiae LMG 24235 QEN71_RS38685 LysR family transcriptional regulator insig. 36 87
  Enterobacter asburiae PDN3 EX28DRAFT_1494 Transcriptional regulator insig. 35 90
o Azospirillum sp. SherDot2 MPMX19_03900 Hca operon transcriptional activator HcaR insig. 32 95
  Enterobacter sp. TBS_079 MPMX20_02062 Hca operon transcriptional activator HcaR sig. 34 90
  Pseudomonas fluorescens GW456-L13 PfGW456L13_255 LysR family transcriptional regulator YnfL insig. 35 94
  Pseudomonas syringae pv. syringae B728a Psyr_0421 transcriptional regulator, LysR family insig. 35 94
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0421 transcriptional regulator, LysR family insig. 35 94
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01885 DNA-binding transcriptional regulator, LysR family insig. 35 91
  Pseudomonas aeruginosa PA14 IKLFDK_27380 LysR family transcriptional regulator insig. 37 95
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1786 LysR family transcriptional regulator YnfL insig. 36 91
  Pseudomonas fluorescens FW300-N2C3 AO356_09290 LysR family transcriptional regulator insig. 36 94
  Pseudomonas fluorescens SBW25 PFLU_RS02065 LysR family transcriptional regulator insig. 35 94
  Pseudomonas fluorescens SBW25-INTG PFLU_RS02065 LysR family transcriptional regulator sig. 35 94
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3735 LysR family transcriptional regulator YnfL insig. 36 94
  Paraburkholderia graminis OAS925 ABIE53_006314 DNA-binding transcriptional LysR family regulator sig. 35 95
  Dickeya dianthicola ME23 DZA65_RS03420 LysR family transcriptional regulator insig. 33 94
  Ralstonia solanacearum PSI07 RPSI07_RS12845 LysR family transcriptional regulator insig. 39 93
  Pseudomonas sp. BP01 JOY50_RS09345 LysR family transcriptional regulator insig. 36 94