Homologs of GFF362 from Sphingobium sp. HT1-2

Sensory box/GGDEF family protein
SEED: diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Sphingobium sp. HT1-2 GFF362 Sensory box/GGDEF family protein cofit 100 100
o Sphingomonas koreensis DSMZ 15582 Ga0059261_3423 PAS domain S-box/diguanylate cyclase (GGDEF) domain insig. 52 97
  Sphingobium sp. HT1-2 GFF714 hypothetical protein cofit 46 80
o Caulobacter crescentus NA1000 CCNA_00777 PAS family GGDEF/EAL protein cofit 42 96
o Caulobacter crescentus NA1000 Δfur CCNA_00777 PAS family GGDEF/EAL protein cofit 42 96
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3704 diguanylate cyclase (GGDEF) domain insig. 44 70
  Pseudomonas stutzeri RCH2 Psest_1712 PAS domain S-box/diguanylate cyclase (GGDEF) domain insig. 39 74
  Pseudomonas sp. RS175 PFR28_01206 hypothetical protein insig. 38 73
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2238 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 38 75
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_39 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 39 72
  Dechlorosoma suillum PS Dsui_1429 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 40 71
  Caulobacter crescentus NA1000 CCNA_03191 PAS-family GGDEF/EAL family protein cofit 43 58
  Caulobacter crescentus NA1000 Δfur CCNA_03191 PAS-family GGDEF/EAL family protein cofit 43 58
  Rhizobium sp. OAE497 ABIE40_RS15540 EAL domain-containing protein insig. 46 57
  Rhodopseudomonas palustris CGA009 TX73_017630 EAL domain-containing protein insig. 46 56
  Dechlorosoma suillum PS Dsui_0894 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 42 68
  Pseudomonas sp. DMC3 GFF1254 hypothetical protein insig. 39 70
  Rhodopseudomonas palustris CGA009 TX73_004010 EAL domain-containing protein insig. 37 82
  Magnetospirillum magneticum AMB-1 AMB_RS18310 bifunctional diguanylate cyclase/phosphodiesterase cofit 39 74
  Pseudomonas sp. BP01 JOY50_RS24285 EAL domain-containing protein insig. 39 72
  Magnetospirillum magneticum AMB-1 AMB_RS06165 CBS domain-containing protein insig. 42 60
  Dechlorosoma suillum PS Dsui_3161 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein sig. 41 60
  Sinorhizobium meliloti 1021 SMa1548 Diguanylate cyclase/phosphodiesterase insig. 41 65
  Pseudomonas sp. SVBP6 COO64_RS17205 EAL domain-containing protein insig. 38 70
  Pseudomonas putida KT2440 PP_1154 Sensory box protein insig. 39 70
  Dechlorosoma suillum PS Dsui_2547 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein insig. 38 75
  Pseudomonas aeruginosa PA14 IKLFDK_10140 bifunctional diguanylate cyclase/phosphodiesterase insig. 38 77
  Acidovorax sp. GW101-3H11 Ac3H11_1143 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) sig. 37 75
  Pseudomonas aeruginosa PA14 IKLFDK_24035 GGDEF domain-containing protein cofit 43 61
  Azospirillum brasilense Sp245 AZOBR_RS30045 uncharacterized signaling protein CC_0091 insig. 45 57
  Pseudomonas fluorescens SBW25 PFLU_RS16810 EAL domain-containing protein insig. 38 70
  Pseudomonas fluorescens SBW25-INTG PFLU_RS16810 EAL domain-containing protein insig. 38 70
  Rhodopseudomonas palustris CGA009 TX73_002700 bifunctional diguanylate cyclase/phosphodiesterase insig. 44 59
  Rhodopseudomonas palustris CGA009 TX73_002030 EAL domain-containing protein insig. 45 55
o Ralstonia solanacearum GMI1000 RS_RS07755 GGDEF-domain containing protein insig. 38 84
  Pseudomonas simiae WCS417 PS417_14800 diguanylate cyclase insig. 38 70
  Agrobacterium fabrum C58 Atu4628 diguanylate cyclase insig. 45 55
  Dechlorosoma suillum PS Dsui_2148 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 40 73
  Shewanella sp. ANA-3 Shewana3_4029 diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(s) (RefSeq) cofit 40 60
  Shewanella oneidensis MR-1 SO0341 sensory box protein (NCBI ptt file) insig. 40 60
  Acidovorax sp. GW101-3H11 Ac3H11_4268 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 38 70
  Rhodopseudomonas palustris CGA009 TX73_015335 EAL domain-containing protein insig. 43 58
  Methylophilus sp. DMC18 GFF1786 hypothetical protein insig. 37 69
  Methylophilus sp. DMC18 GFF623 hypothetical protein insig. 33 85
  Bosea sp. OAE506 ABIE41_RS10320 EAL domain-containing protein insig. 45 56
  Marinobacter adhaerens HP15 HP15_1500 sensory box/GGDEF family protein insig. 39 59
  Xanthobacter sp. DMC5 GFF3530 hypothetical protein insig. 43 58
  Pseudomonas lactucae CFBP13502 GEMAOFIL_03279 hypothetical protein cofit 38 70
  Shewanella sp. ANA-3 Shewana3_3829 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) cofit 41 59
  Agrobacterium fabrum C58 Atu3495 diguanylate cyclase sig. 42 57
  Pseudomonas sp. S08-1 OH686_14965 Sensory box/GGDEF family protein cofit 38 70
  Rhodopseudomonas palustris CGA009 TX73_005760 EAL domain-containing protein strong 34 87
  Rahnella sp. WP5 EX31_RS09160 EAL domain-containing protein insig. 43 56
  Pseudomonas sp. BP01 JOY50_RS18490 dibA phosphodiesterase DibA insig. 41 58
  Pseudomonas syringae pv. syringae B728a Psyr_0086 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 42 58
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0086 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 42 58
  Enterobacter asburiae PDN3 EX28DRAFT_1441 PAS domain S-box/diguanylate cyclase (GGDEF) domain insig. 33 77
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3422 diguanylate cyclase (GGDEF) domain insig. 43 56
  Dechlorosoma suillum PS Dsui_1564 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 42 60
  Pseudomonas sp. BP01 JOY50_RS07990 bifunctional diguanylate cyclase/phosphodiesterase insig. 44 56
  Pseudomonas aeruginosa PA14 IKLFDK_22535 bifunctional diguanylate cyclase/phosphodiesterase cofit 38 70
  Ralstonia solanacearum PSI07 RPSI07_RS15375 GGDEF-domain containing protein insig. 42 65
  Pseudomonas putida KT2440 PP_0218 Sensory box protein strong 40 64
  Magnetospirillum magneticum AMB-1 AMB_RS09950 GGDEF domain-containing protein cofit 43 57
  Dechlorosoma suillum PS Dsui_3104 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein strong 41 60
  Paraburkholderia sabiae LMG 24235 QEN71_RS02090 EAL domain-containing protein insig. 43 59
  Magnetospirillum magneticum AMB-1 AMB_RS21020 bifunctional diguanylate cyclase/phosphodiesterase insig. 39 59
  Azospirillum sp. SherDot2 MPMX19_00480 hypothetical protein insig. 43 58
  Dechlorosoma suillum PS Dsui_1011 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein insig. 40 59
  Ralstonia solanacearum PSI07 RPSI07_RS01485 GGDEF domain-containing protein insig. 38 70
  Pseudomonas aeruginosa PA14 IKLFDK_08335 Uncharacterized signaling protein PA1727 insig. 45 54
  Sphingobium sp. HT1-2 GFF2326 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) cofit 45 55
  Acidovorax sp. GW101-3H11 Ac3H11_448 Sensory box/GGDEF family protein insig. 43 59
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03735 diguanylate cyclase/phosphodiesterase insig. 43 56
  Burkholderia phytofirmans PsJN BPHYT_RS03250 diguanylate cyclase insig. 42 59
  Shewanella amazonensis SB2B Sama_3298 sensory box protein (RefSeq) insig. 36 69
  Sinorhizobium meliloti 1021 SM_b20447 hypothetical protein insig. 43 56
  Pseudomonas sp. SVBP6 COO64_RS12500 dibA phosphodiesterase DibA cofit 41 58
  Bosea sp. OAE506 ABIE41_RS24040 EAL domain-containing protein strong 41 55
  Ralstonia solanacearum GMI1000 RS_RS22695 bifunctional diguanylate cyclase/phosphodiesterase insig. 41 57
  Shewanella sp. ANA-3 Shewana3_1161 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) insig. 42 59
  Agrobacterium fabrum C58 Atu3244 diguanylate cyclase insig. 42 55
  Synechococcus elongatus PCC 7942 Synpcc7942_1859 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 40 59
  Herbaspirillum seropedicae SmR1 HSERO_RS23840 hypothetical protein sig. 41 60
  Shewanella oneidensis MR-1 SO3084 sensory box protein (NCBI ptt file) sig. 38 61
  Dechlorosoma suillum PS Dsui_0749 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 43 57
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04630 PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein insig. 42 59
  Ralstonia solanacearum GMI1000 RS_RS18985 GGDEF domain-containing protein insig. 40 60
  Ralstonia sp. UNC404CL21Col ABZR87_RS22185 EAL domain-containing protein insig. 40 60
  Synechococcus elongatus PCC 7942 Synpcc7942_1355 response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 36 70
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS16415 EAL domain-containing protein cofit 41 56
  Rhodospirillum rubrum S1H Rru_A1805 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) (NCBI) cofit 41 60
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS21640 GGDEF domain-containing protein insig. 40 60
  Ralstonia solanacearum UW163 UW163_RS17545 GGDEF domain-containing protein insig. 40 60
  Marinobacter adhaerens HP15 HP15_68 sensory box/FOG: EAL domain/GGDEF domain containing protein insig. 37 67
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1729 GGDEF domain protein insig. 41 57
  Herbaspirillum seropedicae SmR1 HSERO_RS18020 diguanylate cyclase insig. 41 59
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS18290 bifunctional diguanylate cyclase/phosphodiesterase insig. 41 57
  Ralstonia solanacearum UW163 UW163_RS20840 bifunctional diguanylate cyclase/phosphodiesterase insig. 41 57
  Alteromonas macleodii MIT1002 MIT1002_01290 Bacteriophytochrome cph2 cofit 38 63