Homologs of HP15_3043 from Marinobacter adhaerens HP15

DNA polymerase III, epsilon subunit
SEED: DNA polymerase III epsilon subunit (EC 2.7.7.7)
KEGG: DNA polymerase III subunit epsilon

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Marinobacter adhaerens HP15 HP15_3043 DNA polymerase III, epsilon subunit cofit 100 100
o Methylophilus sp. DMC18 GFF1760 3'-5' exonuclease DinG insig. 46 95
o Dechlorosoma suillum PS Dsui_0101 exonuclease, DNA polymerase III, epsilon subunit family cofit 45 92
o Cupriavidus basilensis FW507-4G11 RR42_RS36200 ethanolamine utilization protein insig. 42 92
  Burkholderia phytofirmans PsJN BPHYT_RS15265 DNA polymerase III subunit epsilon insig. 46 58
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03997 DNA polymerase-3 subunit epsilon insig. 43 58
  Paraburkholderia sabiae LMG 24235 QEN71_RS03705 exonuclease domain-containing protein insig. 42 57
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_07430 DNA repair nuclease with dnaQ and GIY-YIG domains (from data) strong 35 84
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2564 DNA repair nuclease with dnaQ and GIY-YIG domains (from data) strong 35 77
  Cellulophaga baltica 18 M666_RS00695 exonuclease domain-containing protein insig. 34 79
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS07560 DNA polymerase III subunit epsilon insig. 32 78
  Cellulophaga baltica 18 M666_RS17600 exonuclease domain-containing protein insig. 35 84
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS13890 exonuclease domain-containing protein insig. 33 78
  Klebsiella michiganensis M5al BWI76_RS11710 nucleotide excision repair endonuclease insig. 39 57
  Escherichia coli ECRC101 MCAODC_18470 cho excinuclease Cho insig. 39 55
  Escherichia coli ECRC100 OKFHMN_26940 cho excinuclease Cho cofit 40 55
  Escherichia coli ECRC102 NIAGMN_01125 cho excinuclease Cho insig. 40 55
  Escherichia coli ECRC98 JDDGAC_01515 cho excinuclease Cho insig. 40 55
  Escherichia coli ECRC99 KEDOAH_01170 cho excinuclease Cho no data 40 55
  Escherichia coli BL21 ECD_01710 endonuclease of nucleotide excision repair no data 40 55
  Escherichia coli ECOR27 NOLOHH_17455 cho excinuclease Cho insig. 40 55
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01991 Excinuclease cho insig. 40 55
  Escherichia coli BW25113 b1741 ydjQ endonuclease of nucleotide excision repair (NCBI) sig. 40 55
  Escherichia coli ECOR38 HEPCGN_05305 cho excinuclease Cho insig. 40 55
  Escherichia coli ECRC62 BNILDI_16240 cho excinuclease Cho cofit 39 55
  Escherichia coli Nissle 1917 ECOLIN_RS09710 excinuclease Cho insig. 40 55
  Escherichia fergusonii Becca EFB2_02252 Excinuclease cho insig. 39 55
  Klebsiella pneumoniae MKP103 KDGMDA_19380 excinuclease Cho insig. 39 55
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3498 Excinuclease cho (excinuclease ABC alternative C subunit) insig. 39 58
  Enterobacter sp. TBS_079 MPMX20_01873 Excinuclease cho insig. 38 58
  Enterobacter asburiae PDN3 EX28DRAFT_1745 GIY-YIG catalytic domain insig. 38 56
  Erwinia amylovora T8 OLJFJH_14770 excinuclease Cho insig. 36 54
  Rahnella sp. WP5 EX31_RS05180 excinuclease Cho insig. 38 60
  Pantoea sp. MT58 IAI47_11065 excinuclease Cho insig. 39 55
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS17530 excinuclease Cho cofit 39 55
  Herbaspirillum seropedicae SmR1 HSERO_RS11365 nuclease insig. 37 55
  Cellulophaga baltica 18 M666_RS14615 exonuclease domain-containing protein insig. 30 73
  Paraburkholderia graminis OAS925 ABIE53_003223 DNA polymerase-3 subunit epsilon insig. 40 38
  Alteromonas macleodii MIT1002 MIT1002_03947 DNA polymerase III PolC-type insig. 48 31
  Mycobacterium tuberculosis H37Rv Rv2191 Conserved hypothetical protein insig. 31 74
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.2112.1 Excinuclease cho (excinuclease ABC alternative C subunit) insig. 34 54
  Serratia liquefaciens MT49 IAI46_09070 endonuclease insig. 33 58
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3320 GIY-YIG catalytic domain. insig. 32 54
  Cupriavidus basilensis FW507-4G11 RR42_RS25820 DNA polymerase III subunit epsilon insig. 41 31
  Fusobacterium nucleatum SB010 HUW76_02840 PolC-type DNA polymerase III no data 35 35
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2127 DNA polymerase III alpha subunit (EC 2.7.7.7) insig. 39 37
  Shewanella sp. ANA-3 Shewana3_2251 DNA polymerase III, epsilon subunit (RefSeq) insig. 35 33
  Synechococcus elongatus PCC 7942 Synpcc7942_0251 Exonuclease sig. 36 32
  Shewanella loihica PV-4 Shew_1871 DNA polymerase III, epsilon subunit (RefSeq) no data 39 30
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5043 DNA polymerase III alpha subunit (EC 2.7.7.7) no data 37 33
  Shewanella oneidensis MR-1 SO2245 dnaQ-1 DNA polymerase III, epsilon subunit (NCBI ptt file) sig. 35 33
  Pseudomonas sp. RS175 PFR28_03828 DNA polymerase III PolC-type no data 37 33
  Pseudomonas fluorescens FW300-N2C3 AO356_15515 DNA polymerase III subunit epsilon insig. 37 33
  Azospirillum brasilense Sp245 AZOBR_RS14205 exonuclease strong 36 34
  Pseudomonas fluorescens FW300-N2E3 AO353_06275 DNA polymerase III subunit epsilon insig. 38 30
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1406 DNA polymerase III alpha subunit (EC 2.7.7.7) no data 35 33
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0619 excinuclease ABC, C subunit strong 33 41
  Acidovorax sp. GW101-3H11 Ac3H11_5015 DNA polymerase III alpha subunit (EC 2.7.7.7) insig. 38 30
  Pseudomonas lactucae CFBP13502 GEMAOFIL_05052 '3'-5' exonuclease DinG' transl_table=11 cofit 37 30
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2733 DNA polymerase III alpha subunit (EC 2.7.7.7) insig. 37 30
  Pseudomonas sp. DMC3 GFF3922 DNA polymerase III PolC-type cofit 35 33
  Caulobacter crescentus NA1000 CCNA_02975 excinuclease ABC subunit C strong 33 42
  Caulobacter crescentus NA1000 Δfur CCNA_02975 excinuclease ABC subunit C cofit 33 42
  Cellulophaga baltica 18 M666_RS03735 excinuclease ABC subunit UvrC cofit 30 41
  Pseudomonas fluorescens SBW25 PFLU_RS26455 3'-5' exonuclease insig. 34 40
  Pseudomonas fluorescens SBW25-INTG PFLU_RS26455 3'-5' exonuclease insig. 34 40
  Pseudomonas syringae pv. syringae B728a Psyr_4300 DNA polymerase III, epsilon subunit insig. 33 39
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4300 DNA polymerase III, epsilon subunit insig. 33 39
  Pseudomonas sp. S08-1 OH686_08770 DNA polymerase III alpha subunit insig. 40 30
  Pseudomonas simiae WCS417 PS417_24520 DNA polymerase III subunit epsilon sig. 33 40
  Ralstonia solanacearum GMI1000 RS_RS09455 DNA polymerase III subunit epsilon no data 40 30
  Azospirillum sp. SherDot2 MPMX19_01859 3'-5' exonuclease DinG insig. 36 34
  Bifidobacterium breve UCC2003 BBR_RS13650 3'-5' exonuclease insig. 34 35
  Pseudomonas sp. SVBP6 COO64_RS15410 PolC-type DNA polymerase III insig. 32 33
  Dickeya dianthicola ME23 DZA65_RS17250 DNA polymerase III subunit epsilon no data 34 39
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS02300 DNA polymerase III subunit epsilon no data 39 30
  Ralstonia solanacearum UW163 UW163_RS11425 DNA polymerase III subunit epsilon no data 39 30
  Ralstonia sp. UNC404CL21Col ABZR87_RS14230 DNA polymerase III subunit epsilon no data 33 37
  Dickeya dianthicola 67-19 HGI48_RS16165 DNA polymerase III subunit epsilon no data 33 39
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS01670 excinuclease ABC subunit UvrC insig. 33 41
  Agrobacterium fabrum C58 Atu0005 DNA polymerase III, epsilon chain no data 35 39
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.2477.1 Excinuclease ABC subunit C sig. 32 37
  Azospirillum sp. SherDot2 MPMX19_02042 3'-5' exonuclease DinG insig. 33 42
  Serratia liquefaciens MT49 IAI46_04150 DNA polymerase III subunit epsilon no data 33 31
  Marinobacter adhaerens HP15 HP15_1802 DNA polymerase 3, epsilon subunit no data 35 31
  Pseudomonas sp. BP01 JOY50_RS21815 PolC-type DNA polymerase III insig. 34 33
  Bosea sp. OAE506 ABIE41_RS16250 3'-5' exonuclease insig. 32 38
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_20740 uvrC excinuclease ABC subunit UvrC cofit 32 35
  Erwinia tracheiphila SCR3 LU632_RS10195 uvrC excinuclease ABC subunit UvrC insig. 32 35
  Herbaspirillum seropedicae SmR1 HSERO_RS09690 excinuclease ABC subunit C strong 31 41
  Methanococcus maripaludis JJ MMJJ_RS01240 excinuclease ABC subunit UvrC insig. 25 35
  Methanococcus maripaludis S2 MMP_RS03810 excinuclease ABC subunit UvrC insig. 25 35
  Pseudomonas putida KT2440 PP_4768 Exonuclease insig. 35 30
  Dickeya dadantii 3937 DDA3937_RS16045 DNA polymerase III subunit epsilon no data 34 31
  Acidovorax sp. GW101-3H11 Ac3H11_373 Excinuclease ABC subunit C strong 32 40
  Methylophilus sp. DMC18 GFF496 UvrABC system protein C insig. 31 38
  Enterobacter asburiae PDN3 EX28DRAFT_2679 DNA polymerase III, epsilon subunit, Proteobacterial no data 34 34
  Azospirillum brasilense Sp245 AZOBR_RS08965 excinuclease ABC subunit C insig. 31 39
  Enterobacter sp. TBS_079 MPMX20_00900 DNA polymerase III subunit epsilon no data 34 34
  Sphingobium sp. HT1-2 GFF4167 DNA polymerase III epsilon subunit (EC 2.7.7.7) no data 33 32