Homologs of Psest_2903 from Pseudomonas stutzeri RCH2

Site-specific recombinase XerD

Top 100 hits from BLASTp (E < 0.01)

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Orth	Species	Gene	Name	Description	Fitness	%Id	Cov
	Pseudomonas stutzeri RCH2	Psest_2903		Site-specific recombinase XerD	insig.	100	100
o	Pseudomonas sp. S08-1	OH686_07985		Phage integrase	cofit	83	98
o	Pantoea sp. MT58	IAI47_02995		tyrosine-type recombinase/integrase	insig.	44	96
o	Pectobacterium carotovorum WPP14	HER17_RS07965		tyrosine-type recombinase/integrase	insig.	44	97
	Dickeya dianthicola 67-19	HGI48_RS02890		tyrosine-type recombinase/integrase	insig.	42	100
	Pectobacterium carotovorum WPP14	HER17_RS18625		tyrosine-type recombinase/integrase	cofit	45	95
	Enterobacter sp. TBS_079	MPMX20_03950		Tyrosine recombinase XerC	strong	43	96
	Erwinia tracheiphila SCR3	LU632_RS03480		tyrosine-type recombinase/integrase	insig.	43	100
	Burkholderia phytofirmans PsJN	BPHYT_RS01250		integrase	insig.	43	96
o	Escherichia coli ECRC62	BNILDI_11500	xerD	integrase	cofit	42	97
o	Dickeya dadantii 3937	DDA3937_RS04115		site-specific integrase	insig.	44	90
	Dickeya dianthicola ME23	DZA65_RS04005		site-specific integrase	insig.	43	90
	Escherichia coli ECRC102	NIAGMN_02040	xerD	integrase	insig.	43	96
	Escherichia fergusonii Becca	EFB2_03259		Tyrosine recombinase XerC	insig.	42	93
	Escherichia coli ECRC98	JDDGAC_00600	xerD	integrase	cofit	42	96
	Escherichia coli ECRC100	OKFHMN_26010	xerD	integrase	cofit	42	96
	Escherichia coli ECRC101	MCAODC_19380	xerD	integrase	insig.	42	96
	Escherichia coli ECRC99	KEDOAH_02080	xerD	integrase	no data	42	96
	Escherichia coli HS(pFamp)R (ATCC 700891)	OHPLBJKB_02862		Tyrosine recombinase XerD	insig.	42	91
o	Escherichia coli BL21	ECD_00815		integrase for prophage	insig.	42	90
	Pectobacterium carotovorum WPP14	HER17_RS05350		site-specific integrase	insig.	41	96
	Klebsiella michiganensis M5al	BWI76_RS09185		integrase	insig.	41	91
o	Escherichia coli ECOR38	HEPCGN_04445	xerD	integrase	insig.	45	80
	Pseudomonas stutzeri RCH2	Psest_4123		Site-specific recombinase XerD	sig.	42	94
	Pseudomonas aeruginosa PA14	IKLFDK_05595		integrase	insig.	40	96
	Marinobacter adhaerens HP15	HP15_3093		phage integrase family protein	insig.	39	96
	Pseudomonas stutzeri RCH2	Psest_3052		Site-specific recombinase XerD	insig.	39	95
	Pseudomonas aeruginosa PA14	IKLFDK_03615		Putative integrase	insig.	43	74
	Vibrio cholerae E7946 ATCC 55056	CSW01_11165		integrase	insig.	36	94
	Rahnella sp. WP5	EX31_RS18465		tyrosine-type recombinase/integrase	insig.	33	94
	Erwinia tracheiphila SCR3	LU632_RS01475		tyrosine-type recombinase/integrase	sig.	35	94
	Escherichia coli ECRC98	JDDGAC_09320		integrase	strong	34	94
	Enterobacter asburiae PDN3	EX28DRAFT_0878		Site-specific recombinase XerD	insig.	33	94
	Escherichia coli ECRC101	MCAODC_20995	int	Integrase	insig.	32	94
	Erwinia tracheiphila SCR3	LU632_RS21160		tyrosine-type recombinase/integrase	no data	41	46
	Escherichia coli ECOR38	HEPCGN_26815	xerD	integrase	insig.	65	23
	Pseudomonas aeruginosa PA14	IKLFDK_29580		putative bacteriophage integrase	no data	47	34
o	Magnetospirillum magneticum AMB-1	AMB_RS18470		site-specific integrase	insig.	29	90
o	Rhodanobacter denitrificans MT42	LRK55_RS00045		site-specific integrase	insig.	26	93
	Agrobacterium fabrum C58	Atu1194		phage-related integrase	insig.	26	88
	Sinorhizobium meliloti 1021	SMc02397		integrase	insig.	30	61
o	Ralstonia solanacearum GMI1000	RS_RS07820		site-specific integrase	insig.	24	90
	Castellaniella sp019104865 MT123	ABCV34_RS02095		site-specific integrase	insig.	27	86
	Phaeobacter inhibens DSM 17395	PGA1_c00260		putative phage integrase, catalytic core	insig.	28	79
	Magnetospirillum magneticum AMB-1	AMB_RS19880		site-specific tyrosine recombinase XerD	cofit	29	59
o	Cupriavidus basilensis FW507-4G11	RR42_RS19640		hypothetical protein	insig.	25	90
	Dechlorosoma suillum PS	Dsui_1127		site-specific recombinase XerD	cofit	27	70
	Sinorhizobium meliloti 1021	SMc00691		site-specific tyrosine recombinase XerD	sig.	28	54
	Burkholderia phytofirmans PsJN	BPHYT_RS35970		DNA recombinase	insig.	28	73
	Rhodanobacter sp. FW510-T8	OKGIIK_15325	xerC	tyrosine recombinase XerC	no data	28	67
	Dinoroseobacter shibae DFL-12	Dshi_0395		integrase family protein (RefSeq)	insig.	26	80
	Dyella japonica UNC79MFTsu3.2	ABZR86_RS13965		site-specific integrase	insig.	26	62
	Pseudomonas sp. S08-1	OH686_18870		Integron integrase IntIPac	insig.	44	19
	Rhodanobacter sp000427505 FW510-R12	LRK53_RS02315		tyrosine recombinase XerC	insig.	27	67
	Escherichia coli BL21	ECD_00486		DLP12 prophage; putative phage integrase	insig.	24	57
	Escherichia coli ECOR27	NOLOHH_00750	intD	Prophage integrase IntD	insig.	24	57
	Magnetospirillum magneticum AMB-1	AMB_RS04635		site-specific integrase	cofit	27	84
	Dyella japonica UNC79MFTsu3.2	ABZR86_RS15025		tyrosine recombinase XerC	strong	26	66
	Escherichia coli BW25113	b0537	intD	DLP12 prophage; predicted integrase (NCBI)	sig.	24	57
	Desulfovibrio vulgaris Hildenborough JW710	DVU2197		site-specific recombinase, phage integrase family (TIGR)	insig.	25	61
o	Ralstonia solanacearum UW163	UW163_RS11435		site-specific integrase	insig.	28	87
	Mycobacterium tuberculosis H37Rv	Rv1701		Probable integrase/recombinase	sig.	29	44
	Lysobacter sp. OAE881	ABIE51_RS07380		site-specific integrase	strong	28	65
	Shewanella oneidensis MR-1	SO_A0045		site-specific recombinase, phage integrase family (NCBI)	insig.	27	56
	Bacteroides stercoris CC31F	HMPREF1181_RS09900		site-specific integrase	insig.	34	26
	Rhodanobacter denitrificans FW104-10B01	LRK54_RS08535		tyrosine recombinase XerC	insig.	28	66
	Phocaeicola vulgatus CL09T03C04	HMPREF1058_RS01845		site-specific integrase	insig.	28	62
	Phocaeicola vulgatus CL09T03C04	HMPREF1058_RS01075		site-specific integrase	insig.	29	64
	Pseudomonas putida KT2440	PP_2297		putative integrative genetic element Ppu40, integrase	insig.	29	38
	Rhizobium sp. OAE497	ABIE40_RS17685		site-specific tyrosine recombinase XerD	sig.	26	45
	Phocaeicola dorei CL03T12C01	ABI39_RS16050		site-specific integrase	insig.	29	62
	Parabacteroides merdae CL09T00C40	HMPREF1078_RS08890		site-specific integrase	insig.	34	26
	Agrobacterium fabrum C58	Atu3629		site-specific tyrosine recombinase XerD	no data	39	21
	Xanthobacter sp. DMC5	GFF3621		Tyrosine recombinase XerC	insig.	28	57
	Rhodospirillum rubrum S1H	Rru_A1220		Phage integrase (NCBI)	no data	26	64
	Dinoroseobacter shibae DFL-12	Dshi_1611		integrase family protein (RefSeq)	strong	32	27
	Sphingomonas koreensis DSMZ 15582	Ga0059261_2764		Site-specific recombinase XerD	sig.	27	66
	Bifidobacterium breve UCC2003	BBR_RS16755		site-specific tyrosine recombinase XerD	strong	25	74
	Pontibacter actiniarum KMM 6156, DSM 19842	CA264_09695		integrase	strong	33	26
	Azospirillum brasilense Sp245	AZOBR_RS03240		recombinase XerD	insig.	26	49
	Caulobacter crescentus NA1000	CCNA_03101		site-specific tyrosine recombinase XerD	strong	26	62
	Caulobacter crescentus NA1000 Δfur	CCNA_03101		site-specific tyrosine recombinase XerD	cofit	26	62
	Desulfovibrio vulgaris Hildenborough JW710	DVU1757		site-specific recombinase, phage integrase family (TIGR)	insig.	25	67
	Phocaeicola dorei CL03T12C01	ABI39_RS16135		site-specific integrase	insig.	44	18
	Shewanella amazonensis SB2B	Sama_1355		phage integrase family site specific recombinase (RefSeq)	insig.	38	22
	Brevundimonas sp. GW460-12-10-14-LB2	A4249_RS04165		site-specific tyrosine recombinase XerD	no data	33	26
	Dechlorosoma suillum PS	Dsui_0138		site-specific recombinase XerD	cofit	27	87
	Mucilaginibacter yixingensis YX-36 DSM 26809	ABZR88_RS02610		site-specific integrase	insig.	26	50
	Bacteroides ovatus ATCC 8483	BACOVA_04789		site-specific recombinase, phage integrase family	insig.	21	81
	Pseudomonas fluorescens SBW25	PFLU_RS29280		tyrosine recombinase XerC	sig.	49	14
	Pseudomonas fluorescens SBW25-INTG	PFLU_RS29280		tyrosine recombinase XerC	strong	49	14
	Pseudomonas sp. RS175	PFR28_04378		Tyrosine recombinase XerC	strong	49	14
	Pseudomonas syringae pv. syringae B728a	Psyr_0185		tyrosine recombinase XerC subunit	sig.	49	14
	Pseudomonas syringae pv. syringae B728a ΔmexB	Psyr_0185		tyrosine recombinase XerC subunit	sig.	49	14
	Pseudomonas simiae WCS417	PS417_27595		recombinase XerC	sig.	49	14
	Pseudomonas fluorescens FW300-N1B4	Pf1N1B4_2171		Tyrosine recombinase XerC	insig.	49	14
	Pseudomonas fluorescens FW300-N2C3	AO356_12725		recombinase XerC	strong	49	14
	Pseudomonas fluorescens FW300-N2E2	Pf6N2E2_4416		Tyrosine recombinase XerC	strong	49	14
	Phocaeicola dorei CL03T12C01	ABI39_RS15220		site-specific integrase	insig.	28	62
	Azospirillum brasilense Sp245	AZOBR_RS24420		integrase	insig.	27	68