Homologs of GFF1929 from Variovorax sp. SCN45

Transcriptional regulator, AraC family

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Variovorax sp. SCN45 GFF1929 Transcriptional regulator, AraC family insig. 100 100
o Variovorax sp. OAS795 ABID97_RS20685 AraC family transcriptional regulator insig. 65 93
o Pseudomonas fluorescens SBW25 PFLU_RS12720 AraC family transcriptional regulator insig. 48 98
o Pseudomonas fluorescens SBW25-INTG PFLU_RS12720 AraC family transcriptional regulator insig. 48 98
o Pseudomonas sp. DMC3 GFF3735 HTH-type transcriptional activator RhaR cofit 44 97
o Pseudomonas fluorescens FW300-N2C3 AO356_20655 AraC family transcriptional regulator insig. 44 97
o Pseudomonas sp. BP01 JOY50_RS27840 AraC family transcriptional regulator insig. 45 96
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_6016 Transcriptional regulator, AraC family insig. 44 94
o Pseudomonas putida KT2440 PP_1711 Transcriptional regulator, AraC family insig. 45 95
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS09480 AraC family transcriptional regulator insig. 26 87
  Rahnella sp. WP5 EX31_RS10900 helix-turn-helix domain-containing protein insig. 36 35
o Bacteroides thetaiotaomicron VPI-5482 BT3667 transcriptional regulator (NCBI ptt file) insig. 23 82
  Phocaeicola dorei CL03T12C01 ABI39_RS01165 helix-turn-helix transcriptional regulator insig. 30 48
  Rahnella sp. WP5 EX31_RS14690 helix-turn-helix transcriptional regulator insig. 36 35
  Klebsiella michiganensis M5al BWI76_RS10640 AraC family transcriptional regulator insig. 31 48
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS16455 AraC family transcriptional regulator insig. 30 44
  Klebsiella pneumoniae MKP103 KDGMDA_09345 AraC family transcriptional regulator insig. 39 35
  Enterobacter sp. TBS_079 MPMX20_04525 HTH-type transcriptional activator RhaR insig. 37 32
  Pantoea sp. MT58 IAI47_05640 helix-turn-helix transcriptional regulator insig. 40 34
  Rhodospirillum rubrum S1H Rru_A0919 Two Component Transcriptional Regulator, AraC family (NCBI) insig. 35 33
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2340 Transcriptional regulator, AraC family insig. 36 35
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS00290 helix-turn-helix transcriptional regulator insig. 29 48
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS04680 AraC family transcriptional regulator insig. 27 43
  Klebsiella michiganensis M5al BWI76_RS00825 AraC family transcriptional regulator insig. 37 35
  Variovorax sp. SCN45 GFF4698 Transcriptional regulator of various polyols utilization, AraC family insig. 39 34
  Paraburkholderia sabiae LMG 24235 QEN71_RS17030 AraC family transcriptional regulator insig. 40 32
  Enterobacter asburiae PDN3 EX28DRAFT_4417 Helix-turn-helix domain insig. 35 32
  Cellulophaga baltica 18 M666_RS19460 AraC family transcriptional regulator insig. 22 86
  Rhodopseudomonas palustris CGA009 TX73_010875 AraC family transcriptional regulator insig. 39 33
  Escherichia coli BL21 ECD_03839 AraC family putative transcriptional activator insig. 36 35
  Escherichia fergusonii Becca EFB2_04660 HTH-type transcriptional activator RhaS insig. 36 35
  Escherichia coli ECOR27 NOLOHH_05750 yijO Uncharacterized HTH-type transcriptional regulator YijO insig. 36 35
  Escherichia coli ECOR38 HEPCGN_12250 yijO Uncharacterized HTH-type transcriptional regulator YijO insig. 36 35
  Escherichia coli ECRC100 OKFHMN_13605 yijO Uncharacterized HTH-type transcriptional regulator YijO cofit 36 35
  Escherichia coli ECRC101 MCAODC_04105 yijO Uncharacterized HTH-type transcriptional regulator YijO insig. 36 35
  Escherichia coli ECRC102 NIAGMN_11355 yijO Uncharacterized HTH-type transcriptional regulator YijO cofit 36 35
  Escherichia coli ECRC62 BNILDI_05775 yijO Uncharacterized HTH-type transcriptional regulator YijO cofit 36 35
  Escherichia coli ECRC98 JDDGAC_17230 yijO Uncharacterized HTH-type transcriptional regulator YijO insig. 36 35
  Escherichia coli ECRC99 KEDOAH_14555 yijO Uncharacterized HTH-type transcriptional regulator YijO no data 36 35
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_04096 HTH-type transcriptional activator RhaS insig. 36 35
  Escherichia coli Nissle 1917 ECOLIN_RS22825 AraC family transcriptional regulator insig. 36 35
  Escherichia coli BW25113 b3954 yijO predicted DNA-binding transcriptional regulator (NCBI) insig. 36 35
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2573 AraC-type DNA-binding domain-containing proteins cofit 35 33
  Ralstonia sp. UNC404CL21Col ABZR87_RS18340 helix-turn-helix domain-containing protein insig. 34 45
  Klebsiella pneumoniae MKP103 KDGMDA_03665 regulatory protein PocR insig. 29 64
  Variovorax sp. SCN45 GFF5280 Transcriptional regulator of various polyols utilization, AraC family insig. 38 34
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1249 Transcriptional regulator, AraC family insig. 38 34
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS04235 hypothetical protein insig. 27 43
  Pseudomonas stutzeri RCH2 Psest_2631 AraC-type DNA-binding domain-containing proteins sig. 29 56
  Rahnella sp. WP5 EX31_RS16720 helix-turn-helix domain-containing protein sig. 32 33
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4948 Transcriptional regulator, AraC family sig. 31 46
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3539 AraC-type DNA-binding domain-containing proteins insig. 28 48
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS08825 helix-turn-helix domain-containing protein insig. 27 56
  Rhodospirillum rubrum S1H Rru_A0536 Transcriptional Regulator, AraC family (NCBI) insig. 40 33
  Bacteroides stercoris CC31F HMPREF1181_RS09050 helix-turn-helix domain-containing protein insig. 27 55
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS12260 hypothetical protein insig. 27 45
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS21715 AraC family transcriptional regulator insig. 25 88
  Phocaeicola dorei CL03T12C01 ABI39_RS19325 AraC family transcriptional regulator insig. 19 86
  Escherichia coli ECOR27 NOLOHH_16025 pocR regulatory protein PocR insig. 25 66
  Klebsiella michiganensis M5al BWI76_RS23095 hypothetical protein insig. 35 37
  Pseudomonas fluorescens SBW25 PFLU_RS13410 AraC family transcriptional regulator strong 35 33
  Pseudomonas fluorescens SBW25-INTG PFLU_RS13410 AraC family transcriptional regulator strong 35 33
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03562 AraC family transcriptional regulator insig. 33 41
  Pseudomonas segetis P6 ACVTMO_RS01735 AraC family transcriptional regulator insig. 29 41
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4577 Transcriptional regulator, AraC family insig. 39 32
  Azospirillum sp. SherDot2 MPMX19_02871 HTH-type transcriptional activator RhaR insig. 38 32
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3361 Transcriptional regulator, AraC family insig. 38 32
  Enterobacter sp. TBS_079 MPMX20_02241 HTH-type transcriptional activator RhaS sig. 36 32
  Azospirillum sp. SherDot2 MPMX19_01511 HTH-type transcriptional activator RhaR insig. 35 39
  Acinetobacter baumannii LAC-4 RR41_RS12805 AraC family transcriptional regulator insig. 32 32
  Pseudomonas sp. SVBP6 COO64_RS11410 AraC family transcriptional regulator insig. 31 46
  Erwinia amylovora T8 OLJFJH_14320 arabinose operon transcriptional regulator AraC insig. 29 55
  Variovorax sp. OAS795 ABID97_RS07150 AraC family transcriptional regulator strong 38 34
  Pseudomonas sp. DMC3 GFF1896 HTH-type transcriptional activator RhaS cofit 35 39
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS06070 helix-turn-helix domain-containing protein insig. 29 33
  Phaeobacter inhibens DSM 17395 PGA1_c14190 putative transcriptional regulator, AraC family strong 34 38
  Pseudomonas syringae pv. syringae B728a Psyr_1041 transcriptional regulator, AraC family insig. 32 46
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1041 transcriptional regulator, AraC family insig. 32 46
  Klebsiella michiganensis M5al BWI76_RS12430 AraC family transcriptional regulator insig. 39 33
  Bacteroides stercoris CC31F HMPREF1181_RS11110 AraC family transcriptional regulator insig. 38 26
  Pseudomonas syringae pv. syringae B728a Psyr_2441 transcriptional regulator, AraC family insig. 30 41
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2441 transcriptional regulator, AraC family insig. 30 41
  Sinorhizobium meliloti 1021 SMc00558 transcriptional regulator insig. 28 85
  Rhodopseudomonas palustris CGA009 TX73_006805 AraC family transcriptional regulator insig. 35 35
  Pseudomonas lactucae CFBP13502 GEMAOFIL_02793 HTH-type transcriptional activator RhaS cofit 34 33
  Pseudomonas simiae WCS417 PS417_12725 AraC family transcriptional regulator strong 34 33
  Dinoroseobacter shibae DFL-12 Dshi_4172 transcriptional regulator, AraC family (RefSeq) no data 34 34
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3949 Propanediol utilization transcriptional activator insig. 31 37
  Vibrio cholerae E7946 ATCC 55056 CSW01_09150 AraC family transcriptional regulator cofit 31 33
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_18840 AraC family transcriptional regulator sig. 26 86
  Rhizobium sp. OAE497 ABIE40_RS21380 AraC family transcriptional regulator strong 34 35
  Burkholderia phytofirmans PsJN BPHYT_RS34420 AraC family transcriptional regulator insig. 34 32
  Pseudomonas orientalis W4I3 QF045_RS17170 AraC family transcriptional regulator insig. 34 33
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS18520 AraC family transcriptional regulator cofit 31 29
  Pseudomonas sp. S08-1 OH686_02580 hypothetical protein insig. 30 37
  Pseudomonas sp. DMC3 GFF1007 HTH-type transcriptional activator RhaR cofit 39 32
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3044 Transcriptional regulator of various polyols utilization, AraC family strong 34 33
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_811 Transcriptional regulator of various polyols utilization, AraC family insig. 34 33
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS05740 AraC family transcriptional regulator insig. 31 32
  Marinobacter adhaerens HP15 HP15_905 protein containing helix-turn-helix, AraC domain insig. 31 44