Homologs of DZA65_RS02400 from Dickeya dianthicola ME23

HTH-type transcriptional activator RhaR
SEED: L-rhamnose operon transcriptional activator RhaR
KEGG: AraC family transcriptional regulator, L-rhamnose operon transcriptional activator RhaR

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Dickeya dianthicola ME23 DZA65_RS02400 HTH-type transcriptional activator RhaR insig. 100 100
o Dickeya dianthicola 67-19 HGI48_RS02285 HTH-type transcriptional activator RhaR insig. 100 100
o Dickeya dadantii 3937 DDA3937_RS02330 HTH-type transcriptional activator RhaR insig. 94 100
o Pectobacterium carotovorum WPP14 HER17_RS19240 helix-turn-helix domain-containing protein insig. 79 97
o Rahnella sp. WP5 EX31_RS04165 HTH-type transcriptional activator RhaR insig. 67 99
o Pantoea sp. MT58 IAI47_09690 HTH-type transcriptional activator RhaR insig. 55 97
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS06475 HTH-type transcriptional activator RhaR cofit 54 97
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_22875 rhaR HTH-type transcriptional activator RhaR cofit 55 96
o Erwinia tracheiphila SCR3 LU632_RS11695 rhaR HTH-type transcriptional activator RhaR insig. 55 96
o Escherichia coli ECRC100 OKFHMN_13885 rhaR HTH-type transcriptional activator RhaR insig. 48 95
o Escherichia coli ECRC101 MCAODC_04385 rhaR HTH-type transcriptional activator RhaR insig. 48 95
o Escherichia coli ECRC102 NIAGMN_11640 rhaR HTH-type transcriptional activator RhaR insig. 48 95
o Escherichia coli ECRC98 JDDGAC_17510 rhaR HTH-type transcriptional activator RhaR insig. 48 95
o Escherichia coli ECRC99 KEDOAH_14270 rhaR HTH-type transcriptional activator RhaR no data 48 95
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_04144 HTH-type transcriptional activator RhaR insig. 48 95
o Escherichia coli ECOR27 NOLOHH_06015 rhaR HTH-type transcriptional activator RhaR strong 48 95
o Escherichia coli BW25113 b3906 rhaR DNA-binding transcriptional activator, L-rhamnose-binding (RefSeq) insig. 48 95
o Escherichia coli BL21 ECD_03792 transcriptional activator of rhaSR insig. 48 95
o Escherichia fergusonii Becca EFB2_04711 HTH-type transcriptional activator RhaR insig. 48 95
o Escherichia coli ECOR38 HEPCGN_12525 rhaR HTH-type transcriptional activator RhaR insig. 48 95
o Escherichia coli ECRC62 BNILDI_05510 rhaR HTH-type transcriptional activator RhaR cofit 48 95
o Escherichia coli Nissle 1917 ECOLIN_RS22505 HTH-type transcriptional activator RhaR strong 48 95
o Klebsiella michiganensis M5al BWI76_RS00695 AraC family transcriptional regulator sig. 47 96
o Enterobacter sp. TBS_079 MPMX20_04561 HTH-type transcriptional activator RhaR strong 47 96
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2267 L-rhamnose operon transcriptional activator RhaR insig. 46 95
o Klebsiella pneumoniae MKP103 KDGMDA_09205 HTH-type transcriptional activator RhaR insig. 46 98
o Klebsiella pneumoniae MRSN742743 KFA93_RS22680 rhaR;go_function=DNA-binding HTH-type transcriptional activator RhaR insig. 46 98
  Klebsiella michiganensis M5al BWI76_RS00690 transcriptional activator RhaS strong 33 95
  Klebsiella pneumoniae MKP103 KDGMDA_09200 HTH-type transcriptional activator RhaS insig. 33 95
  Klebsiella pneumoniae MRSN742743 KFA93_RS22675 rhaS;go_function=DNA-binding HTH-type transcriptional activator RhaS insig. 33 95
  Escherichia fergusonii Becca EFB2_04712 HTH-type transcriptional activator RhaS insig. 34 95
  Escherichia coli Nissle 1917 ECOLIN_RS22500 HTH-type transcriptional activator RhaS strong 34 95
  Escherichia coli ECOR38 HEPCGN_12530 rhaS HTH-type transcriptional activator RhaS insig. 34 95
  Escherichia coli ECRC100 OKFHMN_13890 rhaS HTH-type transcriptional activator RhaS insig. 34 95
  Escherichia coli ECRC101 MCAODC_04390 rhaS HTH-type transcriptional activator RhaS insig. 34 95
  Escherichia coli ECRC102 NIAGMN_11645 rhaS HTH-type transcriptional activator RhaS cofit 34 95
  Escherichia coli ECRC98 JDDGAC_17515 rhaS HTH-type transcriptional activator RhaS insig. 34 95
  Escherichia coli ECRC99 KEDOAH_14265 rhaS HTH-type transcriptional activator RhaS no data 34 95
  Escherichia coli ECOR27 NOLOHH_06020 rhaS HTH-type transcriptional activator RhaS strong 34 95
  Escherichia coli ECRC62 BNILDI_05505 rhaS HTH-type transcriptional activator RhaS insig. 34 95
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_04145 HTH-type transcriptional activator RhaS insig. 34 95
  Escherichia coli BW25113 b3905 rhaS DNA-binding transcriptional activator, L-rhamnose-binding (NCBI) insig. 34 95
  Escherichia coli BL21 ECD_03791 transcriptional activator of rhaBAD and rhaT insig. 34 95
  Dickeya dianthicola ME23 DZA65_RS02395 HTH-type transcriptional activator RhaS insig. 34 95
  Dickeya dianthicola 67-19 HGI48_RS02280 HTH-type transcriptional activator RhaS insig. 34 95
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2266 L-rhamnose operon regulatory protein RhaS insig. 33 95
  Pectobacterium carotovorum WPP14 HER17_RS19245 HTH-type transcriptional activator RhaS insig. 34 95
  Dickeya dadantii 3937 DDA3937_RS02325 HTH-type transcriptional activator RhaS insig. 32 96
  Enterobacter sp. TBS_079 MPMX20_04562 HTH-type transcriptional activator RhaS strong 33 95
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_22880 rhaS HTH-type transcriptional activator RhaS insig. 33 95
  Erwinia tracheiphila SCR3 LU632_RS11690 rhaS HTH-type transcriptional activator RhaS insig. 33 95
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS06470 HTH-type transcriptional activator RhaS cofit 32 95
  Pantoea sp. MT58 IAI47_09695 HTH-type transcriptional activator RhaS insig. 32 95
  Dickeya dianthicola 67-19 HGI48_RS01745 helix-turn-helix domain-containing protein insig. 29 96
  Dickeya dianthicola ME23 DZA65_RS01820 helix-turn-helix domain-containing protein insig. 29 96
  Rahnella sp. WP5 EX31_RS04170 HTH-type transcriptional activator RhaS insig. 33 94
  Rahnella sp. WP5 EX31_RS00245 HTH-type transcriptional activator RhaS insig. 31 95
  Rahnella sp. WP5 EX31_RS06415 helix-turn-helix domain-containing protein no data 28 95
  Klebsiella pneumoniae MKP103 KDGMDA_22910 AraC family transcriptional regulator insig. 30 96
  Klebsiella pneumoniae MRSN742743 KFA93_RS14435 helix-turn-helix domain-containing protein no data 30 96
  Klebsiella michiganensis M5al BWI76_RS13620 positive regulator for rhaBAD operon sig. 29 96
  Rhizobium sp. OAE497 ABIE40_RS25710 AraC family transcriptional regulator insig. 31 56
  Pseudomonas fluorescens FW300-N2E3 AO353_15220 AraC family transcriptional regulator insig. 39 33
  Pseudomonas sp. RS175 PFR28_03611 HTH-type transcriptional regulator CdhR strong 39 33
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1629 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain insig. 39 33
  Pseudomonas fluorescens FW300-N2C3 AO356_17040 AraC family transcriptional regulator insig. 39 33
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5332 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain insig. 39 33
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_968 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain insig. 37 35
  Pseudomonas lactucae CFBP13502 GEMAOFIL_01031 HTH-type transcriptional regulator CdhR cofit 39 33
  Pseudomonas simiae WCS417 PS417_04130 AraC family transcriptional regulator insig. 39 33
  Pseudomonas fluorescens SBW25 PFLU_RS04170 GlxA family transcriptional regulator insig. 39 33
  Pseudomonas fluorescens SBW25-INTG PFLU_RS04170 GlxA family transcriptional regulator insig. 39 33
  Pseudomonas sp. DMC3 GFF4442 HTH-type transcriptional regulator CdhR insig. 39 33
  Pseudomonas orientalis W4I3 QF045_RS07130 GlxA family transcriptional regulator cofit 37 35
  Pseudomonas syringae pv. syringae B728a Psyr_4121 transcriptional regulator, AraC family with amidase-like domain protein insig. 38 34
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4121 transcriptional regulator, AraC family with amidase-like domain protein insig. 38 34
  Pseudomonas sp. S08-1 OH686_08420 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain insig. 38 33
  Pseudomonas stutzeri RCH2 Psest_0723 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain insig. 33 43
  Cupriavidus basilensis FW507-4G11 RR42_RS25180 AraC family transcriptional regulator insig. 30 56
  Pseudomonas putida KT2440 PP_1313 Transcriptional regulator, AraC family strong 38 33
  Pseudomonas segetis P6 ACVTMO_RS18995 GlxA family transcriptional regulator insig. 38 33
  Pseudomonas sp. BP01 JOY50_RS15235 GlxA family transcriptional regulator insig. 38 33
  Pseudomonas sp. SVBP6 COO64_RS11775 GlxA family transcriptional regulator insig. 38 33
  Pseudomonas orientalis W4I3 QF045_RS13840 helix-turn-helix domain-containing protein cofit 36 33
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS17590 AraC family transcriptional regulator insig. 23 89
  Pseudomonas sp. DMC3 GFF1052 HTH-type transcriptional activator RhaR cofit 33 50
  Agrobacterium fabrum C58 Atu3462 AraC family transcriptional regulator insig. 35 34
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS11205 hybrid sensor histidine kinase/response regulator insig. 36 30
  Bacteroides stercoris CC31F HMPREF1181_RS07740 AraC family transcriptional regulator insig. 23 90
  Pseudomonas fluorescens FW300-N2C3 AO356_26250 AraC family transcriptional regulator insig. 35 36
  Sinorhizobium meliloti 1021 SMc01610 transcriptional regulator insig. 31 52
  Paraburkholderia sabiae LMG 24235 QEN71_RS32160 helix-turn-helix domain-containing protein insig. 44 27
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS06780 hybrid sensor histidine kinase/response regulator insig. 32 48
  Escherichia coli BL21 ECD_02292 putative DNA-binding protein insig. 25 86
  Escherichia coli ECOR27 NOLOHH_14040 ypdC Uncharacterized HTH-type transcriptional regulator YpdC insig. 25 86
  Escherichia coli ECOR38 HEPCGN_21565 ypdC Uncharacterized HTH-type transcriptional regulator YpdC insig. 25 86
  Escherichia coli ECRC62 BNILDI_12895 ypdC Uncharacterized HTH-type transcriptional regulator YpdC insig. 25 86
  Escherichia coli Nissle 1917 ECOLIN_RS13705 AraC family transcriptional regulator insig. 25 86
  Paraburkholderia sabiae LMG 24235 QEN71_RS33620 GlxA family transcriptional regulator insig. 32 44
  Escherichia coli ECRC100 OKFHMN_22355 ypdC Uncharacterized HTH-type transcriptional regulator YpdC cofit 25 86