| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Vibrio cholerae E7946 ATCC 55056 | CSW01_15405 | | integron integrase | insig. | 100 | 100 |
| o | Alteromonas macleodii MIT1002 | MIT1002_00573 | | Tyrosine recombinase XerD | insig. | 61 | 98 |
| o | Rhodanobacter denitrificans MT42 | LRK55_RS08605 | | integron integrase | insig. | 53 | 99 |
| o | Pseudomonas sp. S08-1 | OH686_18870 | | Integron integrase IntIPac | insig. | 49 | 100 |
| o | Rhodanobacter sp. FW510-T8 | OKGIIK_15560 | | Integrase | insig. | 48 | 99 |
| o | Sphingobium sp. HT1-2 | GFF5327 | | Integron integrase IntI1 | insig. | 45 | 99 |
| o | Shewanella amazonensis SB2B | Sama_1355 | | phage integrase family site specific recombinase (RefSeq) | insig. | 47 | 99 |
| o | Klebsiella pneumoniae MKP103 | KDGMDA_00325 | | class 1 integron integrase IntI1 | no data | 45 | 99 |
| o | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS08905 | | integron integrase | cofit | 51 | 88 |
| o | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.449.1 | | Integrase | insig. | 48 | 100 |
| o | Shewanella oneidensis MR-1 | SO2037 | | site-specific recombinase, phage integrase family (NCBI ptt file) | insig. | 44 | 100 |
| o | Methylophilus sp. DMC18 | GFF1198 | | Tyrosine recombinase XerD | insig. | 44 | 98 |
| o | Kangiella aquimarina DSM 16071 | B158DRAFT_0342 | | integron integrase | insig. | 40 | 99 |
| | Shewanella amazonensis SB2B | Sama_1633 | | phage integrase family site specific recombinase (RefSeq) | insig. | 42 | 85 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_19805 | | integron integrase | no data | 40 | 83 |
| o | Magnetospirillum magneticum AMB-1 | AMB_RS04775 | | integrase | insig. | 33 | 97 |
| | Alteromonas macleodii MIT1002 | MIT1002_04188 | | integrase/recombinase | insig. | 40 | 52 |
| | Bacteroides stercoris CC31F | HMPREF1181_RS09900 | | site-specific integrase | insig. | 30 | 97 |
| | Phocaeicola dorei CL03T12C01 | ABI39_RS16135 | | site-specific integrase | insig. | 30 | 97 |
| | Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_3270 | | Site-specific recombinase XerD | insig. | 29 | 98 |
| | Cellulophaga baltica 18 | M666_RS13345 | | site-specific integrase | insig. | 30 | 95 |
| | Parabacteroides merdae CL09T00C40 | HMPREF1078_RS08890 | | site-specific integrase | insig. | 30 | 97 |
| | Sphingomonas koreensis DSMZ 15582 | Ga0059261_1244 | | Site-specific recombinase XerD | no data | 33 | 96 |
| | Sphingomonas koreensis DSMZ 15582 | Ga0059261_1749 | | Site-specific recombinase XerD | no data | 33 | 96 |
| o | Sphingomonas koreensis DSMZ 15582 | Ga0059261_1789 | | Site-specific recombinase XerD | no data | 33 | 96 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS05275 | | integrase | no data | 34 | 96 |
| o | Burkholderia phytofirmans PsJN | BPHYT_RS32945 | | integrase | no data | 34 | 96 |
| | Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS04935 | | site-specific integrase | sig. | 30 | 97 |
| o | Paraburkholderia sabiae LMG 24235 | QEN71_RS42900 | | site-specific integrase | no data | 31 | 96 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS39850 | | site-specific integrase | no data | 31 | 96 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS42300 | | site-specific integrase | no data | 31 | 96 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS44560 | | site-specific integrase | no data | 30 | 96 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS42770 | | site-specific integrase | insig. | 30 | 96 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS44370 | | site-specific integrase | insig. | 31 | 96 |
| | Dinoroseobacter shibae DFL-12 | Dshi_3629 | | integrase family protein (RefSeq) | no data | 32 | 97 |
| o | Dinoroseobacter shibae DFL-12 | Dshi_3661 | | integrase family protein (RefSeq) | no data | 32 | 97 |
| | Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_09695 | | integrase | strong | 27 | 95 |
| o | Paraburkholderia graminis OAS925 | ABIE53_001488 | | site-specific recombinase XerD | sig. | 34 | 96 |
| | Marinobacter adhaerens HP15 | HP15_762 | | site-specific tyrosine recombinase XerD | insig. | 32 | 90 |
| | Acinetobacter radioresistens SK82 | MPMX26_00169 | | Tyrosine recombinase XerD | no data | 30 | 94 |
| | Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_00850 | | site-specific tyrosine recombinase XerD | no data | 29 | 91 |
| | Shewanella loihica PV-4 | Shew_0770 | | tyrosine recombinase XerD (RefSeq) | strong | 31 | 93 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_3145 | | Tyrosine recombinase XerD | no data | 33 | 80 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_06385 | | recombinase XerD | strong | 33 | 80 |
| | Acinetobacter baumannii LAC-4 | RR41_RS17765 | | site-specific tyrosine recombinase XerD | no data | 29 | 94 |
| | Desulfovibrio vulgaris Hildenborough JW710 | DVU1654 | xerD | site-specific recombinase, phage integrase family (TIGR) | sig. | 36 | 67 |
| | Parabacteroides merdae CL09T00C40 | HMPREF1078_RS04705 | | site-specific tyrosine recombinase XerD | strong | 28 | 90 |
| | Bacteroides stercoris CC31F | HMPREF1181_RS01250 | | site-specific tyrosine recombinase XerD | insig. | 29 | 90 |
| | Pseudomonas orientalis W4I3 | QF045_RS25085 | | site-specific tyrosine recombinase XerD | cofit | 32 | 80 |
| | Shewanella sp. ANA-3 | Shewana3_3331 | | tyrosine recombinase XerD (RefSeq) | strong | 31 | 82 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_04365 | | recombinase XerD | strong | 34 | 67 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_3011 | | Tyrosine recombinase XerD | insig. | 32 | 80 |
| | Bifidobacterium breve UCC2003 | BBR_RS16755 | | site-specific tyrosine recombinase XerD | strong | 29 | 95 |
| | Pseudomonas sp. S08-1 | OH686_17750 | | tyrosine recombinase XerD | insig. | 32 | 80 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_04729 | | Tyrosine recombinase XerD | cofit | 31 | 90 |
| | Pseudomonas sp. DMC3 | GFF1987 | | Tyrosine recombinase XerD | insig. | 33 | 80 |
| | Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_1809 | | tyrosine recombinase XerD | insig. | 30 | 92 |
| | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS10220 | | site-specific tyrosine recombinase XerD | insig. | 28 | 91 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_1721 | | Tyrosine recombinase XerD | strong | 32 | 80 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS24560 | | site-specific tyrosine recombinase XerD | sig. | 32 | 80 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS24560 | | site-specific tyrosine recombinase XerD | strong | 32 | 80 |
| | Pseudomonas simiae WCS417 | PS417_22895 | | tyrosine recombinase XerD | strong | 32 | 80 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_0359 | | tyrosine recombinase XerD (RefSeq) | strong | 35 | 67 |
| | Castellaniella sp019104865 MT123 | ABCV34_RS00515 | | site-specific tyrosine recombinase XerD | strong | 29 | 90 |
| | Agrobacterium fabrum C58 | Atu3629 | | site-specific tyrosine recombinase XerD | no data | 31 | 94 |
| | Shewanella oneidensis MR-1 | SO0950 | xerD | integrase/recombinase XerD (NCBI ptt file) | strong | 31 | 82 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS14280 | xerD;go_function=site-specific | site-specific tyrosine recombinase XerD | insig. | 30 | 90 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_19085 | | site-specific tyrosine recombinase XerD | no data | 30 | 90 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS42845 | xerD;go_function=site-specific | site-specific tyrosine recombinase XerD | insig. | 30 | 90 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS04265 | | tyrosine recombinase XerD | insig. | 29 | 90 |
| | Pseudomonas segetis P6 | ACVTMO_RS07795 | xerD | site-specific tyrosine recombinase XerD | strong | 32 | 80 |
| | Pseudomonas sp. SVBP6 | COO64_RS04910 | xerD | site-specific tyrosine recombinase XerD | sig. | 32 | 80 |
| | Sinorhizobium meliloti 1021 | SMc00691 | | site-specific tyrosine recombinase XerD | sig. | 29 | 96 |
| | Rhodanobacter sp000427505 FW510-R12 | LRK53_RS02315 | | tyrosine recombinase XerC | insig. | 29 | 91 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS03345 | | recombinase XerD | sig. | 29 | 90 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_04300 | | site-specific tyrosine recombinase XerD | sig. | 30 | 91 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT2843 | | integrase (NCBI ptt file) | strong | 33 | 65 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_1286 | | tyrosine recombinase XerD subunit | sig. | 32 | 80 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_1286 | | tyrosine recombinase XerD subunit | sig. | 32 | 80 |
| | Klebsiella michiganensis M5al | BWI76_RS23815 | | site-specific tyrosine recombinase XerD | no data | 30 | 94 |
| | Shewanella oneidensis MR-1 | SO2164 | | site-specific recombinase, phage integrase family (NCBI ptt file) | no data | 27 | 94 |
| | Shewanella oneidensis MR-1 | SO2211 | | site-specific recombinase, phage integrase family (NCBI ptt file) | no data | 27 | 94 |
| | Dinoroseobacter shibae DFL-12 | Dshi_3700 | | integrase family protein (RefSeq) | insig. | 33 | 69 |
| | Pseudomonas sp. RS175 | PFR28_00331 | | Tyrosine recombinase XerD | strong | 32 | 73 |
| | Rhodospirillum rubrum S1H | Rru_A3738 | | Phage integrase (NCBI) | no data | 31 | 93 |
| | Shewanella oneidensis MR-1 | SO2036 | | site-specific recombinase, phage integrase family (NCBI ptt file) | no data | 27 | 94 |
| | Methylophilus sp. DMC18 | GFF2342 | | Tyrosine recombinase XerD | insig. | 30 | 80 |
| | Shewanella oneidensis MR-1 | SO2528 | | site-specific recombinase, phage integrase family (NCBI ptt file) | no data | 27 | 94 |
| | Erwinia tracheiphila HP pepo 2.2 | IJEDHG_03195 | xerD | site-specific tyrosine recombinase XerD | no data | 30 | 91 |
| | Pseudomonas stutzeri RCH2 | Psest_3129 | | tyrosine recombinase XerD | insig. | 31 | 80 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS19880 | | site-specific tyrosine recombinase XerD | cofit | 30 | 94 |
| | Rhodanobacter sp. FW510-T8 | OKGIIK_15325 | xerC | tyrosine recombinase XerC | insig. | 28 | 91 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_02123 | | tyrosine recombinase XerD | strong | 31 | 64 |
| | Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS09520 | | site-specific tyrosine recombinase XerD | sig. | 28 | 92 |
| | Pseudomonas sp. BP01 | JOY50_RS11700 | xerD | site-specific tyrosine recombinase XerD | insig. | 30 | 83 |
| | Pseudomonas putida KT2440 | PP_1468 | | Tyrosine recombinase XerD | strong | 30 | 83 |
| | Erwinia amylovora T8 | OLJFJH_08835 | | site-specific tyrosine recombinase XerD | strong | 30 | 91 |
| o | Bosea sp. OAE506 | ABIE41_RS00515 | | tyrosine-type recombinase/integrase | insig. | 30 | 97 |
| | Erwinia tracheiphila SCR3 | LU632_RS05975 | xerD | site-specific tyrosine recombinase XerD | no data | 30 | 91 |
| | Vibrio cholerae E7946 ATCC 55056 | CSW01_12250 | | site-specific tyrosine recombinase XerD | strong | 27 | 93 |