Homologs of CSW01_06520 from Vibrio cholerae E7946 ATCC 55056

3'-5' exonuclease
SEED: DNA polymerase III epsilon subunit (EC 2.7.7.7)
KEGG: DNA polymerase III subunit epsilon

96 hits from BLASTp (E < 0.01)

Or try PaperBLAST, fast.genomics, the ENIGMA genome browser, or the comparative fitness browser

Orth Species Gene Name Description Fitness %Id Cov
  Vibrio cholerae E7946 ATCC 55056 CSW01_06520 3'-5' exonuclease insig. 100 100
o Pseudomonas segetis P6 ACVTMO_RS01010 3'-5' exonuclease insig. 53 97
o Shewanella loihica PV-4 Shew_0050 DNA polymerase III subunit epsilon (RefSeq) insig. 46 97
o Marinobacter adhaerens HP15 HP15_3950 exonuclease, RNase T and DNA polymerase III insig. 48 96
  Shewanella sp. ANA-3 Shewana3_1577 exonuclease, RNase T and DNA polymerase III (RefSeq) sig. 39 80
  Shewanella loihica PV-4 Shew_2368 exonuclease, RNase T and DNA polymerase III (RefSeq) no data 37 77
  Shewanella oneidensis MR-1 SO2855 exonuclease (NCBI ptt file) insig. 37 68
  Shewanella amazonensis SB2B Sama_1525 DNA polymerase III epsilon subunit-related 3'-5' exonuclease-like protein (RefSeq) strong 37 71
  Azospirillum sp. SherDot2 MPMX19_01859 3'-5' exonuclease DinG insig. 31 78
  Alteromonas macleodii MIT1002 MIT1002_03505 DNA polymerase III PolC-type strong 31 78
  Azospirillum brasilense Sp245 AZOBR_RS14205 exonuclease strong 31 78
  Magnetospirillum magneticum AMB-1 AMB_RS07795 DNA polymerase III subunit epsilon insig. 30 81
  Ralstonia sp. UNC404CL21Col ABZR87_RS07945 3'-5' exonuclease insig. 28 72
  Marinobacter adhaerens HP15 HP15_1253 DNA polymerase III, epsilon subunit sig. 27 78
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1270 DNA polymerase III, alpha subunit (gram-positive type) strong 26 74
  Pseudomonas stutzeri RCH2 Psest_0349 DNA polymerase III, alpha subunit (gram-positive type) strong 27 78
  Rhodospirillum rubrum S1H Rru_A0633 Exonuclease (NCBI) insig. 22 74
  Desulfovibrio vulgaris Miyazaki F DvMF_0318 Exonuclease RNase T and DNA polymerase III (RefSeq) insig. 30 44
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_00110 DNA polymerase III subunit epsilon insig. 25 81
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1136 DNA polymerase III epsilon subunit (EC 2.7.7.7) insig. 28 80
  Pseudomonas sp. RS175 PFR28_04113 DNA polymerase III PolC-type insig. 25 75
  Pseudomonas putida KT2440 PP_0353 Exonuclease strong 28 75
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2475 DNA polymerase III epsilon subunit (EC 2.7.7.7) no data 27 80
  Burkholderia phytofirmans PsJN BPHYT_RS15265 DNA polymerase III subunit epsilon insig. 28 78
  Bifidobacterium breve UCC2003 BBR_RS13650 3'-5' exonuclease insig. 26 83
  Shewanella sp. ANA-3 Shewana3_2365 DNA polymerase III, epsilon subunit (RefSeq) no data 27 73
  Shewanella oneidensis MR-1 SO2559 dnaQ-2 DNA polymerase III, epsilon subunit (NCBI ptt file) no data 27 72
  Pseudomonas fluorescens FW300-N2C3 AO356_14085 DNA polymerase III subunit epsilon sig. 26 83
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03997 DNA polymerase-3 subunit epsilon insig. 27 73
  Pseudomonas fluorescens FW300-N2E3 AO353_07575 DNA polymerase III subunit epsilon sig. 25 83
  Kangiella aquimarina DSM 16071 B158DRAFT_1064 DNA polymerase III, epsilon subunit, Proteobacterial strong 30 57
  Paraburkholderia sabiae LMG 24235 QEN71_RS03705 exonuclease domain-containing protein insig. 28 73
  Pseudomonas sp. DMC3 GFF86 DNA polymerase III PolC-type cofit 27 74
  Desulfovibrio vulgaris Hildenborough JW710 DVU0443 exonuclease, putative (Keith Keller) insig. 31 33
  Pseudomonas sp. BP01 JOY50_RS17885 PolC-type DNA polymerase III insig. 28 75
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS02300 DNA polymerase III subunit epsilon no data 27 73
  Ralstonia solanacearum UW163 UW163_RS11425 DNA polymerase III subunit epsilon no data 27 73
  Fusobacterium nucleatum SB010 HUW76_02840 PolC-type DNA polymerase III no data 24 72
  Synechococcus elongatus PCC 7942 Synpcc7942_0251 Exonuclease sig. 29 71
  Shewanella amazonensis SB2B Sama_1880 DNA-directed DNA polymerase (RefSeq) no data 25 72
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_07430 DNA repair nuclease with dnaQ and GIY-YIG domains (from data) strong 27 72
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4749 DNA polymerase III epsilon subunit (EC 2.7.7.7) insig. 23 75
  Alteromonas macleodii MIT1002 MIT1002_01691 DNA polymerase III subunit epsilon no data 26 57
  Mycobacterium tuberculosis H37Rv Rv2191 Conserved hypothetical protein insig. 25 75
  Azospirillum sp. SherDot2 MPMX19_01816 hypothetical protein no data 29 52
  Pseudomonas lactucae CFBP13502 GEMAOFIL_05332 DNA polymerase III PolC-type cofit 25 84
  Marinobacter adhaerens HP15 HP15_1993 exonuclease RNase T and DNA polymerase III insig. 30 42
  Pseudomonas fluorescens SBW25 PFLU_RS27700 3'-5' exonuclease cofit 25 91
  Pseudomonas fluorescens SBW25-INTG PFLU_RS27700 3'-5' exonuclease sig. 25 91
  Pseudomonas sp. S08-1 OH686_10495 DNA polymerase III epsilon subunit insig. 24 78
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_00010 3'-5' exonuclease no data 31 42
  Ralstonia sp. UNC404CL21Col ABZR87_RS14230 DNA polymerase III subunit epsilon no data 25 73
  Ralstonia solanacearum GMI1000 RS_RS09455 DNA polymerase III subunit epsilon no data 25 72
  Ralstonia solanacearum PSI07 RPSI07_RS15070 DNA polymerase III subunit epsilon no data 24 72
  Cupriavidus basilensis FW507-4G11 RR42_RS36200 ethanolamine utilization protein insig. 28 69
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2564 DNA repair nuclease with dnaQ and GIY-YIG domains (from data) strong 27 71
  Pseudomonas simiae WCS417 PS417_26060 DNA polymerase III subunit epsilon strong 24 84
  Pseudomonas sp. SVBP6 COO64_RS22775 PolC-type DNA polymerase III insig. 26 78
  Cupriavidus basilensis FW507-4G11 RR42_RS13585 DNA polymerase III subunit epsilon no data 27 73
  Azospirillum sp. SherDot2 MPMX19_01560 3'-5' exonuclease DinG strong 26 41
  Pseudomonas aeruginosa MRSN321 DY961_RS00755 3'-5' exonuclease strong 26 72
  Pseudomonas aeruginosa PUPa3 DQ20_RS40280 3'-5' exonuclease strong 26 72
  Dinoroseobacter shibae DFL-12 Dshi_3559 DNA polymerase III, epsilon subunit (RefSeq) cofit 25 76
  Azospirillum sp. SherDot2 MPMX19_06127 DNA polymerase III subunit epsilon insig. 32 47
  Rhizobium sp. OAE497 ABIE40_RS26835 3'-5' exonuclease insig. 28 42
  Shewanella loihica PV-4 Shew_2111 DNA polymerase III, epsilon subunit (RefSeq) no data 27 72
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS09830 DNA polymerase III subunit epsilon no data 24 72
  Pseudomonas aeruginosa PA14 IKLFDK_16455 3'-5' exonuclease sig. 24 72
  Marinobacter adhaerens HP15 HP15_3043 DNA polymerase III, epsilon subunit cofit 28 55
  Cellulophaga baltica 18 M666_RS09395 3'-5' exonuclease no data 31 34
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS01980 3'-5' exonuclease strong 24 74
  Dechlorosoma suillum PS Dsui_2005 DNA polymerase III epsilon subunit-like 3'-5' exonuclease cofit 25 76
  Marinobacter adhaerens HP15 HP15_1802 DNA polymerase 3, epsilon subunit no data 29 40
  Acidovorax sp. GW101-3H11 Ac3H11_4106 DNA polymerase III epsilon subunit (EC 2.7.7.7) no data 24 57
  Pantoea sp. MT58 IAI47_15325 DNA polymerase III subunit epsilon no data 24 72
  Sphingobium sp. HT1-2 GFF202 hypothetical protein cofit 30 50
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3818 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases strong 24 74
  Klebsiella michiganensis M5al BWI76_RS05455 DNA polymerase III subunit epsilon no data 23 72
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4954 DNA polymerase III epsilon subunit (EC 2.7.7.7) no data 28 41
  Acinetobacter baumannii LAC-4 RR41_RS09305 DNA polymerase III subunit epsilon no data 24 75
  Enterobacter asburiae PDN3 EX28DRAFT_2679 DNA polymerase III, epsilon subunit, Proteobacterial no data 24 72
  Vibrio cholerae E7946 ATCC 55056 CSW01_01525 3'-5' exonuclease insig. 28 76
  Pseudomonas aeruginosa MRSN321 DY961_RS20810 dnaQ;go_function=DNA DNA polymerase III subunit epsilon no data 25 57
  Pseudomonas aeruginosa PUPa3 DQ20_RS54890 dnaQ;go_function=DNA DNA polymerase III subunit epsilon no data 25 57
  Pseudomonas stutzeri RCH2 Psest_2074 DNA polymerase III, epsilon subunit, Proteobacterial no data 27 57
  Xanthobacter sp. DMC5 GFF3739 DNA polymerase III subunit epsilon no data 27 72
  Enterobacter sp. TBS_079 MPMX20_00900 DNA polymerase III subunit epsilon no data 23 74
  Dickeya dianthicola ME23 DZA65_RS17250 DNA polymerase III subunit epsilon no data 24 74
  Acinetobacter radioresistens SK82 MPMX26_02275 Ribonuclease H cofit 23 81
  Pseudomonas aeruginosa PA14 IKLFDK_08830 DNA polymerase III subunit epsilon no data 25 57
  Dickeya dianthicola 67-19 HGI48_RS16165 DNA polymerase III subunit epsilon no data 24 74
  Vibrio cholerae E7946 ATCC 55056 CSW01_11380 DNA polymerase III subunit epsilon no data 25 58
  Pseudomonas segetis P6 ACVTMO_RS13890 dnaQ DNA polymerase III subunit epsilon no data 26 57
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS07560 DNA polymerase III subunit epsilon insig. 25 72
  Paraburkholderia sabiae LMG 24235 QEN71_RS04745 DNA polymerase III subunit epsilon no data 28 40
  Dechlorosoma suillum PS Dsui_0101 exonuclease, DNA polymerase III, epsilon subunit family cofit 30 52