Homologs of CSW01_02250 from Vibrio cholerae E7946 ATCC 55056

DUF3394 domain-containing protein
SEED: TRAP-type uncharacterized transport system, fused permease component

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Vibrio cholerae E7946 ATCC 55056 CSW01_02250 DUF3394 domain-containing protein insig. 100 100
o Marinobacter adhaerens HP15 HP15_1070 TRAP-type uncharacterized transport system, fused permease component sig. 65 99
o Pseudomonas stutzeri RCH2 Psest_0197 TRAP transporter, 4TM/12TM fusion protein strong 57 99
o Sinorhizobium meliloti 1021 SM_b20291 hypothetical protein insig. 54 93
o Phaeobacter inhibens DSM 17395 PGA1_c16170 TRAP transporter, 4TM/12TM fusion protein strong 51 99
o Dinoroseobacter shibae DFL-12 Dshi_1444 TRAP transporter, 4TM/12TM fusion protein (RefSeq) strong 50 99
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4038 TRAP-type uncharacterized transport system, fused permease component insig. 49 100
  Pseudomonas aeruginosa PA14 IKLFDK_25690 C4-dicarboxylate ABC transporter insig. 35 79
o Azospirillum sp. SherDot2 MPMX19_05256 hypothetical protein insig. 34 81
  Castellaniella sp019104865 MT123 ABCV34_RS12540 TRAP transporter permease cofit 35 80
o Azospirillum brasilense Sp245 AZOBR_RS08575 C4-dicarboxylate ABC transporter insig. 35 79
  Xanthobacter sp. DMC5 GFF4729 hypothetical protein insig. 34 78
  Bosea sp. OAE506 ABIE41_RS05850 TRAP transporter permease insig. 35 76
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_320 TRAP transporter, 4TM/12TM fusion protein, unknown substrate 1 insig. 42 39
  Azospirillum brasilense Sp245 AZOBR_RS16500 C4-dicarboxylate ABC transporter permease insig. 41 40
  Pseudomonas stutzeri RCH2 Psest_0084 alpha-ketoglutarate TRAP transporter, 4TM/12TM components (from data) strong 31 79
  Magnetospirillum magneticum AMB-1 AMB_RS04540 C4-dicarboxylate ABC transporter insig. 41 42
  Pseudomonas sp. DMC3 GFF1142 hypothetical protein cofit 41 39
  Pseudomonas sp. RS175 PFR28_02586 hypothetical protein insig. 41 39
  Shewanella sp. ANA-3 Shewana3_0456 TRAP transporter, 4TM/12TM fusion protein (RefSeq) insig. 41 38
  Shewanella oneidensis MR-1 SO0455 hypothetical transporter (NCBI ptt file) strong 42 38
  Pseudomonas putida KT2440 PP_3955 permease insig. 40 41
  Rhodopseudomonas palustris CGA009 TX73_023415 TRAP transporter permease insig. 44 30
  Bosea sp. OAE506 ABIE41_RS03160 TRAP transporter permease insig. 42 34
  Dinoroseobacter shibae DFL-12 Dshi_1194 TRAP transporter for fumarate, succinate, L-malate, and 2-oxoglutarate, fused 4TM/12TM components (from data) strong 42 31
  Marinobacter adhaerens HP15 HP15_723 TRAP transporter for fumarate, succinate, L-malate, and 2-oxoglutarate, fused 4TM/12TM components (from data) strong 42 31
  Bosea sp. OAE506 ABIE41_RS02510 TRAP transporter fused permease subunit insig. 46 26
  Vibrio cholerae E7946 ATCC 55056 CSW01_14735 C4-dicarboxylate ABC transporter permease insig. 40 26
  Dinoroseobacter shibae DFL-12 Dshi_0646 TRAP transporter, 4TM/12TM fusion protein (RefSeq) insig. 35 41
  Dinoroseobacter shibae DFL-12 Dshi_2287 TRAP transporter, 4TM/12TM fusion protein (RefSeq) insig. 38 34
  Rhodopseudomonas palustris CGA009 TX73_017905 TRAP transporter permease insig. 37 36
  Dinoroseobacter shibae DFL-12 Dshi_0994 TRAP transporter, 4TM/12TM fusion protein (RefSeq) insig. 39 28
  Shewanella sp. ANA-3 Shewana3_0456 TRAP transporter, 4TM/12TM fusion protein (RefSeq) insig. 35 29
  Pseudomonas sp. DMC3 GFF1142 hypothetical protein cofit 39 25
  Shewanella oneidensis MR-1 SO0455 hypothetical transporter (NCBI ptt file) strong 38 25
  Bosea sp. OAE506 ABIE41_RS03160 TRAP transporter permease insig. 37 25
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_320 TRAP transporter, 4TM/12TM fusion protein, unknown substrate 1 insig. 39 25
  Pseudomonas putida KT2440 PP_3955 permease insig. 38 23
  Serratia liquefaciens MT49 IAI46_10120 TRAP transporter permease insig. 35 26
  Pseudomonas sp. RS175 PFR28_02586 hypothetical protein insig. 38 25
  Magnetospirillum magneticum AMB-1 AMB_RS04540 C4-dicarboxylate ABC transporter insig. 42 24
  Dinoroseobacter shibae DFL-12 Dshi_1088 TRAP transporter, 4TM/12TM fusion protein (RefSeq) insig. 33 40
  Azospirillum brasilense Sp245 AZOBR_RS16500 C4-dicarboxylate ABC transporter permease insig. 34 33
  Dinoroseobacter shibae DFL-12 Dshi_1194 TRAP transporter for fumarate, succinate, L-malate, and 2-oxoglutarate, fused 4TM/12TM components (from data) strong 35 24
  Marinobacter adhaerens HP15 HP15_723 TRAP transporter for fumarate, succinate, L-malate, and 2-oxoglutarate, fused 4TM/12TM components (from data) strong 36 24
  Rhodopseudomonas palustris CGA009 TX73_023415 TRAP transporter permease insig. 38 19
  Dinoroseobacter shibae DFL-12 Dshi_0994 TRAP transporter, 4TM/12TM fusion protein (RefSeq) insig. 34 20
  Dinoroseobacter shibae DFL-12 Dshi_2287 TRAP transporter, 4TM/12TM fusion protein (RefSeq) insig. 33 22
  Vibrio cholerae E7946 ATCC 55056 CSW01_14735 C4-dicarboxylate ABC transporter permease insig. 41 12
  Pseudomonas sp. DMC3 GFF1144 C4-dicarboxylate TRAP transporter large permease protein DctM cofit 34 18
  Pseudomonas sp. RS175 PFR28_00121 C4-dicarboxylate TRAP transporter large permease protein DctM insig. 34 17
  Pseudomonas sp. RS175 PFR28_02440 C4-dicarboxylate TRAP transporter large permease protein DctM strong 32 16
  Pseudomonas sp. DMC3 GFF1614 C4-dicarboxylate TRAP transporter large permease protein DctM insig. 32 16
  Pseudomonas fluorescens FW300-N2C3 AO356_23045 hypothetical protein insig. 32 16
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_485 TRAP-type C4-dicarboxylate transport system, large permease component insig. 32 16
  Pseudomonas syringae pv. syringae B728a Psyr_0898 TRAP dicarboxylate transporter, DctM subunit insig. 34 14
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0898 TRAP dicarboxylate transporter, DctM subunit insig. 34 14
  Pseudomonas simiae WCS417 PS417_17380 membrane protein insig. 31 16
  Synechocystis sp000284455 PCC 6803 SGL_RS10910 TRAP transporter large permease subunit insig. 29 16
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5526 TRAP-type C4-dicarboxylate transport system, large permease component cofit 34 17
  Pseudomonas fluorescens SBW25 PFLU_RS19305 TRAP transporter large permease insig. 31 16
  Pseudomonas fluorescens SBW25-INTG PFLU_RS19305 TRAP transporter large permease insig. 31 16
  Enterobacter sp. TBS_079 MPMX20_04347 C4-dicarboxylate TRAP transporter large permease protein DctM insig. 29 18
  Dechlorosoma suillum PS Dsui_3153 TRAP transporter, DctM subunit sig. 27 30
  Magnetospirillum magneticum AMB-1 AMB_RS04550 C4-dicarboxylate ABC transporter permease insig. 32 21
  Pseudomonas putida KT2440 PP_1167 D-glucuronate / D-galacturonate TRAP transporter, large permease component (from data) strong 32 14
  Pantoea sp. MT58 IAI47_03220 TRAP transporter large permease insig. 31 14
  Herbaspirillum seropedicae SmR1 HSERO_RS04250 C4-dicarboxylate ABC transporter permease sig. 32 20
  Rahnella sp. WP5 EX31_RS08020 TRAP transporter large permease insig. 36 11
  Dinoroseobacter shibae DFL-12 Dshi_1482 TRAP dicarboxylate transporter, DctM subunit (RefSeq) strong 31 20
  Pseudomonas sp. BP01 JOY50_RS02045 TRAP transporter large permease insig. 31 14
  Pseudomonas stutzeri RCH2 Psest_4270 TRAP transporter, DctM subunit strong 33 18
  Dinoroseobacter shibae DFL-12 Dshi_2753 TRAP dicarboxylate transporter, DctM subunit (RefSeq) insig. 32 16
  Agrobacterium fabrum C58 Atu3135 ABC transporter permease strong 28 21
  Pseudomonas aeruginosa PA14 IKLFDK_27640 C4-dicarboxylate TRAP transporter large permease protein DctM insig. 33 17
  Azospirillum sp. SherDot2 MPMX19_00661 C4-dicarboxylate TRAP transporter large permease protein DctM insig. 30 20
  Acidovorax sp. GW101-3H11 Ac3H11_3955 TRAP-type C4-dicarboxylate transport system, large permease component insig. 30 16
  Pectobacterium carotovorum WPP14 HER17_RS19685 TRAP transporter large permease cofit 35 11
  Desulfovibrio vulgaris Miyazaki F DvMF_2137 TRAP dicarboxylate transporter, DctM subunit (RefSeq) cofit 31 17
  Dechlorosoma suillum PS Dsui_1262 TRAP transporter, DctM subunit cofit 26 26
  Pseudomonas aeruginosa PA14 IKLFDK_03935 C4-dicarboxylate TRAP transporter large permease protein DctM insig. 32 17
  Variovorax sp. SCN45 GFF1830 TRAP dicarboxylate transporter, DctM subunit, unknown substrate 3 insig. 33 15
  Shewanella amazonensis SB2B Sama_2211 alpha-ketoglutarate TRAP transporter, large permease component (from data) strong 33 21
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5652 TRAP dicarboxylate transporter, DctM subunit, unknown substrate 3 insig. 39 11
  Azospirillum brasilense Sp245 AZOBR_RS09595 C4-dicarboxylate ABC transporter permease sig. 30 21
  Xanthobacter sp. DMC5 GFF2559 C4-dicarboxylate TRAP transporter large permease protein DctM insig. 30 16
  Xanthobacter sp. DMC5 GFF4531 hypothetical protein insig. 27 22
  Rhodopseudomonas palustris CGA009 TX73_010185 TRAP transporter large permease subunit strong 25 26
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF795 TRAP-type C4-dicarboxylate transport system, large permease component insig. 31 17
  Ralstonia sp. UNC404CL21Col ABZR87_RS21100 TRAP transporter large permease insig. 40 11
  Pseudomonas stutzeri RCH2 Psest_0361 TRAP transporter, DctM subunit insig. 35 11
  Shewanella sp. ANA-3 Shewana3_1414 TRAP dicarboxylate transporter, DctM subunit (RefSeq) strong 30 21
  Dechlorosoma suillum PS Dsui_2534 TRAP transporter, DctM subunit cofit 36 11
  Castellaniella sp019104865 MT123 ABCV34_RS09320 TRAP transporter large permease insig. 28 19
  Azospirillum brasilense Sp245 AZOBR_RS20015 C4-dicarboxylate ABC transporter sig. 25 23
  Castellaniella sp019104865 MT123 ABCV34_RS02885 TRAP transporter large permease insig. 31 16
  Shewanella oneidensis MR-1 SO3136 dctM C4-dicarboxylate transport protein (NCBI ptt file) insig. 32 17
  Caulobacter crescentus NA1000 CCNA_01515 C4-dicarboxylate transporter large subunit sig. 30 16
  Caulobacter crescentus NA1000 Δfur CCNA_01515 C4-dicarboxylate transporter large subunit cofit 30 16
  Pseudomonas fluorescens SBW25 PFLU_RS16920 TRAP transporter large permease insig. 30 21