Homologs of CA265_RS09585 from Pedobacter sp. GW460-11-11-14-LB5

RNA helicase
SEED: FIG00907532: hypothetical protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS09585 RNA helicase strong 100 100
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS12110 DEAD/DEAH box helicase insig. 51 98
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS03395 DEAD/DEAH box helicase no data 31 94
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_14745 DEAD/DEAH box helicase no data 29 97
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS09210 DEAD/DEAH box helicase no data 30 94
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0747 Superfamily II DNA and RNA helicases no data 29 99
  Shewanella amazonensis SB2B Sama_2404 DEAD-box ATP dependent DNA helicase (RefSeq) insig. 26 80
  Marinobacter adhaerens HP15 HP15_3607 DEAD/DEAH box helicase domain protein insig. 27 86
  Shewanella oneidensis MR-1 SO3783 ATP-dependent RNA helicase, DEAD box family (NCBI ptt file) insig. 25 99
  Agrobacterium fabrum C58 Atu2333 ATP-dependent RNA helicase strong 25 83
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0964 Superfamily II DNA and RNA helicases sig. 25 90
  Kangiella aquimarina DSM 16071 B158DRAFT_0320 Superfamily II DNA and RNA helicases insig. 25 85
  Caulobacter crescentus NA1000 CCNA_00878 ATP-dependent RNA helicase cofit 26 84
  Caulobacter crescentus NA1000 Δfur CCNA_00878 ATP-dependent RNA helicase cofit 26 84
  Pseudomonas stutzeri RCH2 Psest_0312 Superfamily II DNA and RNA helicases strong 25 96
  Sphingomonas koreensis DSMZ 15582 Ga0059261_1574 Superfamily II DNA and RNA helicases strong 24 90
  Shewanella loihica PV-4 Shew_0604 DEAD/DEAH box helicase domain-containing protein (RefSeq) insig. 25 86
  Pseudomonas syringae pv. syringae B728a Psyr_0458 Helicase, C-terminal:Type III restriction enzyme, res subunit:DEAD/DEAH box helicase, N-terminal insig. 25 85
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0458 Helicase, C-terminal:Type III restriction enzyme, res subunit:DEAD/DEAH box helicase, N-terminal insig. 25 85
  Pseudomonas stutzeri RCH2 Psest_3505 Superfamily II DNA and RNA helicases strong 24 85
  Desulfovibrio vulgaris Hildenborough JW710 DVU1982 rhlE ATP-dependent RNA helicase RhlE (TIGR) insig. 25 84
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4635 ATP-dependent RNA helicase RhlE strong 24 85
  Pseudomonas sp. RS175 PFR28_04204 ATP-dependent RNA helicase RhlE sig. 25 85
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.2274.1 ATP-dependent 23S rRNA helicase DbpA sig. 27 85
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0511 Superfamily II DNA and RNA helicases insig. 26 85
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2382 ATP-dependent RNA helicase RhlE sig. 25 85
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS00535 DEAD/DEAH box helicase no data 25 91
  Bosea sp. OAE506 ABIE41_RS16930 DEAD/DEAH box helicase strong 24 86
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04222 ATP-dependent RNA helicase RhlE sig. 27 89
  Rhizobium sp. OAE497 ABIE40_RS13915 DEAD/DEAH box helicase insig. 26 87
  Lysobacter sp. OAE881 ABIE51_RS12265 DEAD/DEAH box helicase insig. 25 85
  Azospirillum sp. SherDot2 MPMX19_02097 ATP-dependent RNA helicase RhlE insig. 25 84
  Phocaeicola dorei CL03T12C01 ABI39_RS16490 DEAD/DEAH box helicase strong 23 95
  Rhodospirillum rubrum S1H Rru_A1915 DEAD/DEAH box helicase (NCBI) cofit 25 84
  Dechlorosoma suillum PS Dsui_0309 DNA/RNA helicase, superfamily II insig. 24 86
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3600 Superfamily II DNA and RNA helicases sig. 24 94
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1048 ATP-dependent RNA helicase RhlE sig. 24 85
  Paraburkholderia graminis OAS925 ABIE53_003462 ATP-dependent RNA helicase RhlE sig. 26 84
  Pseudomonas fluorescens FW300-N2E3 AO353_08030 DEAD/DEAH box helicase sig. 24 85
  Sinorhizobium meliloti 1021 SMc00522 ATP-dependent RNA helicase strong 23 93
  Dechlorosoma suillum PS Dsui_1351 DNA/RNA helicase, superfamily II strong 22 87
  Pseudomonas fluorescens FW300-N2C3 AO356_13590 DEAD/DEAH box helicase sig. 24 85
  Burkholderia phytofirmans PsJN BPHYT_RS16445 RNA helicase strong 26 84
  Pantoea sp. MT58 IAI47_13435 ATP-dependent RNA helicase RhlE insig. 25 80
  Pseudomonas sp. S08-1 OH686_10835 ATP-dependent RNA helicase RhlE cofit 24 78
  Magnetospirillum magneticum AMB-1 AMB_RS07215 ATP-dependent helicase insig. 22 97
  Shewanella oneidensis MR-1 SO1383 ATP-dependent RNA helicase, DEAD box family (NCBI ptt file) strong 25 86
  Shewanella sp. ANA-3 Shewana3_0810 DEAD/DEAH box helicase domain-containing protein (RefSeq) insig. 25 86
  Vibrio cholerae E7946 ATCC 55056 CSW01_07055 ATP-dependent helicase insig. 24 85
  Caulobacter crescentus NA1000 CCNA_01923 ATP-dependent RNA helicase strong 24 79
  Caulobacter crescentus NA1000 Δfur CCNA_01923 ATP-dependent RNA helicase cofit 24 79
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS16115 DEAD/DEAH box helicase sig. 27 80
  Paraburkholderia sabiae LMG 24235 QEN71_RS02265 DEAD/DEAH box helicase strong 26 84
  Shewanella sp. ANA-3 Shewana3_2988 DEAD/DEAH box helicase domain-containing protein (RefSeq) strong 25 86
  Sinorhizobium meliloti 1021 SM_b20880 ATP-dependent RNA helicase strong 25 90
  Pseudomonas simiae WCS417 PS417_26525 DEAD/DEAH box helicase strong 25 91
  Rhodanobacter denitrificans MT42 LRK55_RS10625 DEAD/DEAH box helicase cofit 24 85
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS10920 DEAD/DEAH box helicase sig. 24 85
  Pseudomonas fluorescens SBW25 PFLU_RS28180 DEAD/DEAH box helicase cofit 24 85
  Pseudomonas fluorescens SBW25-INTG PFLU_RS28180 DEAD/DEAH box helicase sig. 24 85
  Vibrio cholerae E7946 ATCC 55056 CSW01_15010 ATP-dependent RNA helicase RhlE insig. 24 83
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS01200 DEAD/DEAH box helicase insig. 24 97
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS01240 DEAD/DEAH box helicase sig. 24 99
  Pseudomonas sp. S08-1 OH686_16620 ATP-dependent RNA helicase insig. 25 84
  Rahnella sp. WP5 EX31_RS23775 ATP-dependent RNA helicase RhlE insig. 23 80
  Vibrio cholerae E7946 ATCC 55056 CSW01_18185 DEAD/DEAH box family ATP-dependent RNA helicase insig. 26 98
  Klebsiella michiganensis M5al BWI76_RS08915 ATP-dependent RNA helicase RhlE sig. 26 78
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS04900 DEAD/DEAH box helicase cofit 23 91
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF696 ATP-dependent RNA helicase RhlE insig. 25 78
  Erwinia tracheiphila SCR3 LU632_RS09215 rhlE ATP-dependent RNA helicase RhlE cofit 24 78
  Shewanella oneidensis MR-1 SO3125 ATP-dependent RNA helicase, DEAD box family (NCBI ptt file) insig. 25 80
  Shewanella oneidensis MR-1 SO1501 ATP-dependent RNA helicase, DEAD box family (NCBI ptt file) insig. 25 86
  Paraburkholderia sabiae LMG 24235 QEN71_RS32150 DEAD/DEAH box helicase insig. 25 86
  Pseudomonas putida KT2440 PP_4980 ATP-dependent RNA helicase sig. 24 96
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1409 ATP-dependent RNA helicase PA3950 insig. 26 78
  Paraburkholderia graminis OAS925 ABIE53_005853 ATP-dependent RNA helicase RhlE insig. 25 86
  Shewanella amazonensis SB2B Sama_2447 DEAD-box ATP dependent DNA helicase (RefSeq) strong 24 81
  Rhizobium sp. OAE497 ABIE40_RS10055 DEAD/DEAH box helicase sig. 22 84
  Paraburkholderia graminis OAS925 ABIE53_001438 ATP-dependent RNA helicase RhlE strong 22 87
  Alteromonas macleodii MIT1002 MIT1002_00941 ATP-dependent RNA helicase SrmB no data 25 88
  Shewanella sp. ANA-3 Shewana3_2928 DEAD/DEAH box helicase domain-containing protein (RefSeq) insig. 24 99
  Castellaniella sp019104865 MT123 ABCV34_RS13580 DEAD/DEAH box helicase insig. 22 100
  Pseudomonas fluorescens FW300-N2E3 AO353_06265 DEAD/DEAH box helicase strong 27 85
  Dickeya dianthicola 67-19 HGI48_RS11065 ATP-dependent RNA helicase DbpA insig. 25 88
  Dickeya dadantii 3937 DDA3937_RS11045 ATP-dependent RNA helicase DbpA insig. 25 87
  Escherichia fergusonii Becca EFB2_03308 ATP-dependent RNA helicase RhlE insig. 25 78
  Escherichia coli ECOR38 HEPCGN_01750 rhlE ATP-dependent RNA helicase RhlE cofit 25 78
  Escherichia coli Nissle 1917 ECOLIN_RS04245 ATP-dependent RNA helicase RhlE insig. 25 78
  Enterobacter asburiae PDN3 EX28DRAFT_2194 Superfamily II DNA and RNA helicases insig. 25 78
  Enterobacter sp. TBS_079 MPMX20_01425 ATP-dependent RNA helicase RhlE insig. 25 78
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1696 ATP-dependent RNA helicase RhlB insig. 24 86
  Pseudomonas putida KT2440 PP_4766 ATP-dependent RNA helicase strong 24 86
  Vibrio cholerae E7946 ATCC 55056 CSW01_18020 DEAD/DEAH box helicase cofit 24 90
  Escherichia coli BL21 ECD_00764 ATP-dependent RNA helicase insig. 25 78
  Escherichia coli ECOR27 NOLOHH_22645 rhlE ATP-dependent RNA helicase RhlE cofit 25 78
  Escherichia coli ECRC101 OKFHMN_06290 rhlE ATP-dependent RNA helicase RhlE insig. 25 78
  Escherichia coli ECRC101 MCAODC_25505 rhlE ATP-dependent RNA helicase RhlE insig. 25 78
  Escherichia coli ECRC102 NIAGMN_04335 rhlE ATP-dependent RNA helicase RhlE insig. 25 78
  Escherichia coli ECRC62 BNILDI_20925 rhlE ATP-dependent RNA helicase RhlE insig. 25 78
  Escherichia coli ECRC98 JDDGAC_09925 rhlE ATP-dependent RNA helicase RhlE no data 25 78