Homologs of BBR_RS17455 from Bifidobacterium breve UCC2003

DNA-binding response regulator
SEED: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
KEGG: two-component system, OmpR family, response regulator

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Bifidobacterium breve UCC2003 BBR_RS17455 DNA-binding response regulator strong 100 100
o Mycobacterium tuberculosis H37Rv Rv0757 Possible two component system response transcriptional positive regulator PhoP sig. 57 98
  Mycobacterium tuberculosis H37Rv Rv1033c Two component transcriptional regulator TrcR insig. 50 96
  Mycobacterium tuberculosis H37Rv Rv3765c Probable two component transcriptional regulatory protein TcrX insig. 51 97
  Mycobacterium tuberculosis H37Rv Rv0981 Mycobacterial persistence regulator MRPA (two component response transcriptional regulatory protein) insig. 43 95
o Fusobacterium nucleatum SB010 HUW76_07205 response regulator transcription factor strong 41 96
o Marinobacter adhaerens HP15 HP15_3484 DNA-binding response regulator no data 40 95
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_02615 DNA-binding response regulator sig. 39 97
  Pseudomonas sp. RS175 PFR28_02431 Regulator of RpoS insig. 40 98
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS09450 response regulator transcription factor insig. 38 96
o Pseudomonas fluorescens FW300-N2E3 AO353_17925 transcriptional regulator insig. 39 96
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_504 DNA-binding response regulator sig. 40 96
o Sphingomonas koreensis DSMZ 15582 Ga0059261_1369 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain strong 39 96
o Pseudomonas fluorescens FW300-N2C3 AO356_23125 transcriptional regulator sig. 40 96
o Pseudomonas fluorescens SBW25 PFLU_RS12570 response regulator transcription factor insig. 40 96
o Pseudomonas fluorescens SBW25-INTG PFLU_RS12570 response regulator transcription factor insig. 40 96
o Synechococcus elongatus PCC 7942 Synpcc7942_1873 two component transcriptional regulator, winged helix family insig. 36 95
o Pseudomonas simiae WCS417 PS417_11825 transcriptional regulator sig. 40 96
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF63 Phosphate regulon transcriptional regulatory protein PhoB (SphR) insig. 42 95
o Dechlorosoma suillum PS Dsui_0863 phosphate regulon transcriptional regulatory protein PhoB insig. 42 95
  Caulobacter crescentus NA1000 CCNA_00296 phosphate regulon response regulator PhoB strong 44 84
  Caulobacter crescentus NA1000 Δfur CCNA_00296 phosphate regulon response regulator PhoB cofit 44 84
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4267 DNA-binding response regulator no data 40 96
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS03060 DNA-binding response regulator insig. 37 96
  Pseudomonas fluorescens FW300-N2E3 AO353_26815 transcriptional regulator insig. 39 96
o Pseudomonas syringae pv. syringae B728a Psyr_1497 Heavy metal response regulator insig. 39 95
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1497 Heavy metal response regulator insig. 39 95
o Cupriavidus basilensis FW507-4G11 RR42_RS31535 transcriptional regulator insig. 41 95
  Bifidobacterium breve UCC2003 BBR_RS19170 DNA-binding response regulator strong 38 96
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS12570 response regulator transcription factor insig. 40 97
o Rhodanobacter denitrificans MT42 LRK55_RS17060 heavy metal response regulator transcription factor insig. 40 95
  Sinorhizobium meliloti 1021 SMc02140 phosphate regulon transcriptional regulatory protein strong 39 95
o Acidovorax sp. GW101-3H11 Ac3H11_4210 DNA-binding heavy metal response regulator insig. 39 97
o Alteromonas macleodii MIT1002 MIT1002_03097 Transcriptional activator protein CopR insig. 37 95
o Castellaniella sp019104865 MT123 ABCV34_RS14470 phosphate regulon transcriptional regulator PhoB insig. 40 95
  Desulfovibrio vulgaris Miyazaki F DvMF_0882 two component transcriptional regulator, winged helix family (RefSeq) strong 39 95
  Synechococcus elongatus PCC 7942 Synpcc7942_0556 srrB two component transcriptional regulator, winged helix family strong 41 95
o Pseudomonas putida KT2440 PP_5383 transcriptional activator protein insig. 38 96
  Rhizobium sp. OAE497 ABIE40_RS02310 phosphate regulon transcriptional regulator PhoB insig. 38 94
o Azospirillum brasilense Sp245 AZOBR_RS10800 XRE family transcriptional regulator sig. 38 96
o Paraburkholderia graminis OAS925 ABIE53_005703 two-component system copper resistance phosphate regulon response regulator CusR sig. 39 95
  Pseudomonas putida KT2440 PP_0047 response regulator insig. 39 95
  Pseudomonas syringae pv. syringae B728a Psyr_3127 Response regulator receiver:Transcriptional regulatory protein, C-terminal sig. 35 96
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3127 Response regulator receiver:Transcriptional regulatory protein, C-terminal insig. 35 96
o Kangiella aquimarina DSM 16071 B158DRAFT_1663 heavy metal response regulator insig. 40 94
o Pseudomonas stutzeri RCH2 Psest_0581 heavy metal response regulator sig. 39 96
  Rhodopseudomonas palustris CGA009 TX73_024820 phosphate regulon transcriptional regulator PhoB insig. 39 96
  Rhodanobacter denitrificans MT42 LRK55_RS17160 heavy metal response regulator transcription factor insig. 39 95
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS17690 heavy metal response regulator transcription factor insig. 39 95
  Azospirillum sp. SherDot2 MPMX19_06359 Transcriptional activator protein CopR no data 39 95
o Azospirillum sp. SherDot2 MPMX19_06441 Transcriptional activator protein CopR no data 39 95
  Pseudomonas stutzeri RCH2 Psest_1598 heavy metal response regulator insig. 41 96
  Dechlorosoma suillum PS Dsui_2644 heavy metal response regulator cofit 40 95
  Sphingomonas koreensis DSMZ 15582 Ga0059261_2956 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain insig. 40 99
o Enterobacter asburiae PDN3 EX28DRAFT_3608 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain insig. 37 98
  Azospirillum brasilense Sp245 AZOBR_RS01105 PhoB family transcriptional regulator insig. 38 98
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS08970 phosphate regulon transcriptional regulator PhoB no data 42 84
  Cupriavidus basilensis FW507-4G11 RR42_RS30960 transcriptional regulator strong 41 95
  Azospirillum sp. SherDot2 MPMX19_03749 KDP operon transcriptional regulatory protein KdpE insig. 40 99
  Alteromonas macleodii MIT1002 MIT1002_01421 Transcriptional regulatory protein PhoP insig. 39 95
o Acinetobacter radioresistens SK82 MPMX26_03114 Transcriptional regulatory protein CusR cofit 39 95
  Azospirillum sp. SherDot2 MPMX19_00794 Transcriptional activator protein CopR sig. 38 95
  Agrobacterium fabrum C58 Atu0425 two component response regulator no data 38 94
  Desulfovibrio vulgaris Hildenborough JW710 DVU1083 phoB phosphate regulon transcriptional regulator PhoB (TIGR) no data 39 95
  Magnetospirillum magneticum AMB-1 AMB_RS06935 phosphate regulon transcriptional regulatory protein PhoB insig. 39 98
  Azospirillum brasilense Sp245 AZOBR_RS23980 Fis family transcriptional regulator insig. 38 99
o Klebsiella michiganensis M5al BWI76_RS04215 DNA-binding response regulator insig. 38 96
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2622 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain strong 34 96
o Shewanella loihica PV-4 Shew_2695 two component transcriptional regulator (RefSeq) insig. 38 97
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS02125 phosphate regulon transcriptional regulatory protein PhoB sig. 40 98
  Ralstonia solanacearum UW163 UW163_RS15435 phosphate regulon transcriptional regulatory protein PhoB insig. 40 98
  Synechococcus elongatus PCC 7942 Synpcc7942_2416 srrA two component transcriptional regulator, winged helix family sig. 39 95
  Pseudomonas putida KT2440 PP_5320 two-component system DNA-binding transcriptional dual response regulator PhoB strong 39 94
  Pseudomonas stutzeri RCH2 Psest_3845 phosphate regulon transcriptional regulatory protein PhoB sig. 39 94
  Azospirillum sp. SherDot2 MPMX19_02587 Phosphate regulon transcriptional regulatory protein PhoB cofit 38 98
  Mycobacterium tuberculosis H37Rv Rv0602c Two component DNA binding transcriptional regulatory protein TcrA insig. 41 95
  Ralstonia solanacearum GMI1000 RS_RS20255 DNA-binding response regulator insig. 39 97
o Enterobacter sp. TBS_079 MPMX20_00705 Transcriptional regulatory protein CreB insig. 39 98
  Acidovorax sp. GW101-3H11 Ac3H11_461 Phosphate regulon transcriptional regulatory protein PhoB (SphR) cofit 39 95
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4062.1 Phosphate regulon transcriptional regulatory protein PhoB (SphR) strong 38 95
o Escherichia coli ECOR27 NOLOHH_03470 creB two-component system response regulator CreB cofit 38 95
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03663 Transcriptional regulatory protein CreB insig. 38 95
  Rhodospirillum rubrum S1H Rru_A0603 Two component Transcriptional regulator, Winged helix family (NCBI) cofit 36 96
o Escherichia coli BW25113 b4398 creB DNA-binding response regulator in two-component regulatory system with CreC (NCBI) sig. 38 95
o Escherichia coli BL21 ECD_04274 response regulator in two-component regulatory system with CreC insig. 38 95
  Synechococcus elongatus PCC 7942 Synpcc7942_1453 rpaB two component transcriptional regulator, winged helix family no data 40 95
o Burkholderia phytofirmans PsJN BPHYT_RS25955 transcriptional regulator insig. 40 95
o Paraburkholderia sabiae LMG 24235 QEN71_RS15305 heavy metal response regulator transcription factor insig. 40 95
  Rhodanobacter denitrificans MT42 LRK55_RS05740 response regulator transcription factor no data 38 97
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS05985 response regulator transcription factor cofit 38 97
o Escherichia fergusonii Becca EFB2_04046 Transcriptional regulatory protein CreB insig. 38 95
  Ralstonia solanacearum GMI1000 RS_RS07695 phosphate regulon transcriptional regulatory protein PhoB strong 40 98
o Escherichia coli ECRC62 BNILDI_08130 creB two-component system response regulator CreB insig. 38 95
  Ralstonia sp. UNC404CL21Col ABZR87_RS14075 phosphate regulon transcriptional regulator PhoB insig. 40 98
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS20860 DNA-binding response regulator insig. 39 96
  Ralstonia solanacearum UW163 UW163_RS21995 DNA-binding response regulator insig. 39 96
  Pseudomonas putida KT2440 PP_1438 response regulator insig. 39 95
  Pseudomonas fluorescens SBW25 PFLU_RS07760 heavy metal response regulator transcription factor insig. 38 97
  Pseudomonas fluorescens SBW25-INTG PFLU_RS07760 heavy metal response regulator transcription factor insig. 38 97
o Escherichia coli ECOR38 HEPCGN_09145 creB two-component system response regulator CreB cofit 38 95